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The map label for this gene is ybfH [H]

Identifier: 187932861

GI number: 187932861

Start: 1372508

End: 1373416

Strand: Reverse

Name: ybfH [H]

Synonym: CLL_A1337

Alternate gene names: 187932861

Gene position: 1373416-1372508 (Counterclockwise)

Preceding gene: 187934350

Following gene: 187934938

Centisome position: 36.14

GC content: 24.64

Gene sequence:

>909_bases
ATGAATAATAAAAATTTATTATTAAACTTTTTAGCATTTTTTACAATAGTAGTTTGGGGTACTACATTTGTATCTACTAA
AGTATTACTTAGCACTTTCACTCCAGCTGAAATAATGTTTCTTAGATTTTCAATAGCATACATTATGCTTTTACTAATTC
ATCCTAAATTTCACAAAATAACATCATTAAAAGAAGAAGCTTTATTTTTACTTGCTGGAATCACTGGAGGATCTTTGTAT
TTTCTTACTGAAAATTCTGCATTAATTTATTCTCTTACATCTAATGTAGCATTAATTCTTGCCACAGCTCCAATTTTAAC
AGCATTTATGGCACATTTTTTTTCTAAAGGAGAAGCTTTAAATAAAAACTTATTTATTGGATTTATAATTGCAATTTTAG
GTATATTTTTAGTTATCTTTAATGGAAATTTTATATTAAAATTAAATCCACTTGGAGATATTTTAGCTTTATCTGCTGCA
TTATGTTGGGCTACTTATTCGGTAACATTAAAGAAAATTAGTGGTAAATATAACTACATATATATAACTAGAAAAGTATT
TTTTTATGCATTACTAACTATATTACCATTTATATTATGTTCATCAGATAGTAATATAAATACCATGTCATTATCACAAC
CAAAAATAGTATTTAATTTATTATTTCTAGGGGTAATCGCATCTGGCATTTGTTATGTTGTTTGGAATTATACAGTTGAT
AATTTGGGAATTATTAAATCTAATAATTACATTTATTTAATACCAACTGTTACAATGATAGCTTCTTTCTTTGTATTAAA
TGAAAGTATTACTTTATACTCTACCTTTGGTGCAATATTAGTATTACTTGGAGTTTATGTTTCAGAAAATGGATTTAAAC
TACTTAAATTCAAACAAAGCTTACATTAA

Upstream 100 bases:

>100_bases
TACCATTTTGAACAAATATCGATTTATTTACATAAATTTATTATTAATATATACTTACCACAGAGCAAAAATTACATAAT
TAAAGGGGGACTTAATTCAT

Downstream 100 bases:

>100_bases
AATTTAATCTTTATTAAGATTCTATTACTTTGCTTTTATTAAAAATAAATAGTGATATAATATTTTACGAAGAACAAATT
TTACTATGTAATCATAGACA

Product: integral membrane protein domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNNKNLLLNFLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLIHPKFHKITSLKEEALFLLAGITGGSLY
FLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGEALNKNLFIGFIIAILGIFLVIFNGNFILKLNPLGDILALSAA
LCWATYSVTLKKISGKYNYIYITRKVFFYALLTILPFILCSSDSNINTMSLSQPKIVFNLLFLGVIASGICYVVWNYTVD
NLGIIKSNNYIYLIPTVTMIASFFVLNESITLYSTFGAILVLLGVYVSENGFKLLKFKQSLH

Sequences:

>Translated_302_residues
MNNKNLLLNFLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLIHPKFHKITSLKEEALFLLAGITGGSLY
FLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGEALNKNLFIGFIIAILGIFLVIFNGNFILKLNPLGDILALSAA
LCWATYSVTLKKISGKYNYIYITRKVFFYALLTILPFILCSSDSNINTMSLSQPKIVFNLLFLGVIASGICYVVWNYTVD
NLGIIKSNNYIYLIPTVTMIASFFVLNESITLYSTFGAILVLLGVYVSENGFKLLKFKQSLH
>Mature_302_residues
MNNKNLLLNFLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLIHPKFHKITSLKEEALFLLAGITGGSLY
FLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGEALNKNLFIGFIIAILGIFLVIFNGNFILKLNPLGDILALSAA
LCWATYSVTLKKISGKYNYIYITRKVFFYALLTILPFILCSSDSNINTMSLSQPKIVFNLLFLGVIASGICYVVWNYTVD
NLGIIKSNNYIYLIPTVTMIASFFVLNESITLYSTFGAILVLLGVYVSENGFKLLKFKQSLH

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=287, Percent_Identity=25.4355400696864, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33710; Mature: 33710

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKNLLLNFLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLIHPKFHKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
TSLKEEALFLLAGITGGSLYFLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGEAL
HHHHHHHEEEEEECCCCEEEEEECCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCC
NKNLFIGFIIAILGIFLVIFNGNFILKLNPLGDILALSAALCWATYSVTLKKISGKYNYI
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCEEEE
YITRKVFFYALLTILPFILCSSDSNINTMSLSQPKIVFNLLFLGVIASGICYVVWNYTVD
EEHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEC
NLGIIKSNNYIYLIPTVTMIASFFVLNESITLYSTFGAILVLLGVYVSENGFKLLKFKQS
CEEEEECCCEEEEEEHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCEEEHHHHH
LH
CC
>Mature Secondary Structure
MNNKNLLLNFLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLIHPKFHKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
TSLKEEALFLLAGITGGSLYFLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGEAL
HHHHHHHEEEEEECCCCEEEEEECCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCC
NKNLFIGFIIAILGIFLVIFNGNFILKLNPLGDILALSAALCWATYSVTLKKISGKYNYI
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCEEEE
YITRKVFFYALLTILPFILCSSDSNINTMSLSQPKIVFNLLFLGVIASGICYVVWNYTVD
EEHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEC
NLGIIKSNNYIYLIPTVTMIASFFVLNESITLYSTFGAILVLLGVYVSENGFKLLKFKQS
CEEEEECCCEEEEEEHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCEEEHHHHH
LH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]