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The map label for this gene is 187932840

Identifier: 187932840

GI number: 187932840

Start: 1148706

End: 1149548

Strand: Reverse

Name: 187932840

Synonym: CLL_A1119

Alternate gene names: NA

Gene position: 1149548-1148706 (Counterclockwise)

Preceding gene: 187935727

Following gene: 187932480

Centisome position: 30.25

GC content: 25.74

Gene sequence:

>843_bases
ATGCATAAAATAGCTGTTGTTGTAGATAGTACTGCTGTAATTGATAAAAAGTTATTTGAAAATAATGACAACTTATATTC
ATTACCACTACAACTAATAATTGATGATAATTCTTTTAATGATGGAATAGATATAACTCCAAGCGAATTTTGTACTAAAA
TGAATGAATGTGCAAATCTTCCAACAACTTCGCAACCTTCTGTTGGAGATGTTTTTGAACTTTTTGAAGAACTAGTAAAT
AAATATGACTACGTTATATACATTACAATTAGCTCTAAATTAAGTGGTACATTTCAAACTGGAATGTTAGCTAAAAATCA
AGTTTCAAATGATAAAATAATTGTTTTTGACTCTCTTTTTACATCAACTATCCAAAAGCAGATGGCAATTACAACTTTAG
AATTAATTAAAAATAAAAGTTCTATTAATGATATTTTAAAAAATCTTGAATATATAAGATCAAATTCAAAAATATATTTA
GTGGTAGATGATTTATCTCATTTACGCAGAACTGGAAGAATCTCTTTATCTGCAGCTTCTTTTGGGAAATTGTTAAATAT
AAAACCCATCTTATCTTTTGAAGAAGGTCAAATAGTATTAAAAAATAAGGTAAGAACCATGAATAAAGTATATAATAATT
TAATTGAACTAATAAAAAATGAAAATTTAACCGAGAATTCAAAGATTATTATTGCTCATGCAGATGGTTATGATTCTGCA
TTAAAATTAAAAGAAAAAGTATTAGAATTATATCCTAAACATACAATATTAATTGAAGAACTATCCCCTGTAATAAGCGT
ACATACGGGTGCTAGAAGTTTTGGAATATCATGGATATACTAA

Upstream 100 bases:

>100_bases
ATAATATTGACTTAATACTTTACAATATTATATGATGAATATGTAAGTGTTACAAGTGTACCTTTTGTAACATTTATAAC
ATTTTTCGGAGGTGAACTCT

Downstream 100 bases:

>100_bases
TATCATATTAAATTTCATATAAATAAAAGGTTGTCTAAAATTTTAATTTTGGACAACCTTTTGTTTATTGTTTAAAGTAA
TTTAAGTGTTTTTTTATTTA

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MHKIAVVVDSTAVIDKKLFENNDNLYSLPLQLIIDDNSFNDGIDITPSEFCTKMNECANLPTTSQPSVGDVFELFEELVN
KYDYVIYITISSKLSGTFQTGMLAKNQVSNDKIIVFDSLFTSTIQKQMAITTLELIKNKSSINDILKNLEYIRSNSKIYL
VVDDLSHLRRTGRISLSAASFGKLLNIKPILSFEEGQIVLKNKVRTMNKVYNNLIELIKNENLTENSKIIIAHADGYDSA
LKLKEKVLELYPKHTILIEELSPVISVHTGARSFGISWIY

Sequences:

>Translated_280_residues
MHKIAVVVDSTAVIDKKLFENNDNLYSLPLQLIIDDNSFNDGIDITPSEFCTKMNECANLPTTSQPSVGDVFELFEELVN
KYDYVIYITISSKLSGTFQTGMLAKNQVSNDKIIVFDSLFTSTIQKQMAITTLELIKNKSSINDILKNLEYIRSNSKIYL
VVDDLSHLRRTGRISLSAASFGKLLNIKPILSFEEGQIVLKNKVRTMNKVYNNLIELIKNENLTENSKIIIAHADGYDSA
LKLKEKVLELYPKHTILIEELSPVISVHTGARSFGISWIY
>Mature_280_residues
MHKIAVVVDSTAVIDKKLFENNDNLYSLPLQLIIDDNSFNDGIDITPSEFCTKMNECANLPTTSQPSVGDVFELFEELVN
KYDYVIYITISSKLSGTFQTGMLAKNQVSNDKIIVFDSLFTSTIQKQMAITTLELIKNKSSINDILKNLEYIRSNSKIYL
VVDDLSHLRRTGRISLSAASFGKLLNIKPILSFEEGQIVLKNKVRTMNKVYNNLIELIKNENLTENSKIIIAHADGYDSA
LKLKEKVLELYPKHTILIEELSPVISVHTGARSFGISWIY

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31589; Mature: 31589

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIAVVVDSTAVIDKKLFENNDNLYSLPLQLIIDDNSFNDGIDITPSEFCTKMNECANL
CCEEEEEECCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PTTSQPSVGDVFELFEELVNKYDYVIYITISSKLSGTFQTGMLAKNQVSNDKIIVFDSLF
CCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHCCEECCCCCCCEEEEEHHHH
TSTIQKQMAITTLELIKNKSSINDILKNLEYIRSNSKIYLVVDDLSHLRRTGRISLSAAS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCEEEEHHH
FGKLLNIKPILSFEEGQIVLKNKVRTMNKVYNNLIELIKNENLTENSKIIIAHADGYDSA
HCCCEECCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
LKLKEKVLELYPKHTILIEELSPVISVHTGARSFGISWIY
HHHHHHHHHHCCCCEEEHHHHCCCEEEECCCHHCCCEECC
>Mature Secondary Structure
MHKIAVVVDSTAVIDKKLFENNDNLYSLPLQLIIDDNSFNDGIDITPSEFCTKMNECANL
CCEEEEEECCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PTTSQPSVGDVFELFEELVNKYDYVIYITISSKLSGTFQTGMLAKNQVSNDKIIVFDSLF
CCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHCCEECCCCCCCEEEEEHHHH
TSTIQKQMAITTLELIKNKSSINDILKNLEYIRSNSKIYLVVDDLSHLRRTGRISLSAAS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCEEEEHHH
FGKLLNIKPILSFEEGQIVLKNKVRTMNKVYNNLIELIKNENLTENSKIIIAHADGYDSA
HCCCEECCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
LKLKEKVLELYPKHTILIEELSPVISVHTGARSFGISWIY
HHHHHHHHHHCCCCEEEHHHHCCCEEEECCCHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]