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The map label for this gene is lip1 [H]

Identifier: 187932762

GI number: 187932762

Start: 3487146

End: 3488639

Strand: Reverse

Name: lip1 [H]

Synonym: CLL_A3316

Alternate gene names: 187932762

Gene position: 3488639-3487146 (Counterclockwise)

Preceding gene: 187935767

Following gene: 187933889

Centisome position: 91.8

GC content: 30.52

Gene sequence:

>1494_bases
ATGAGAAGATCTTTAGTGAAAATTTTGGGAATTACTGCTTTAGCAATTTCAATTACTTTTACAAATTTTTCAGTACCAGT
TATGGCTATTGAACCAACGAATTCAATTATTATAGAAGATAGTAAATCATCTAATGATTTTATTTCCAATGAAATTGAAA
ACAATATAAAAAGTGAAACAATTATAGAAAATAATAAAGATAATTTAAAAGATGAATCAAACAATAAAGAGGAAGAGGAT
CAGCTGAATGAAATTAAAGAAATGTTAAAAGAATCAAAAACGGAGAATGAAGCTGAAAGTGAAATTATAGAACAAGAACC
ATTACAATATCCTGATATTAAAGGTGATGTTATTGAAGACGGAAACAAATATCCGATAGTATTAGTTCATGGTTTTTTAG
GATTTGGAAGAGATGAACTATTGGGATATAAGTACTGGGGTGGATTAGTTGATGTTCAAGAAAGTTTGAGAGATCAAGGA
TATAAAACTTATACAGCAACAGTAGGTCCTGTTTCAAGTAACTGGGATAGAGCTTGTGAGTTATATGCCTATATTGTTGG
AGGAACAGTAGATTATGGAGAAGCTCATTCTAAAAAGTATGGTCATGAAAGATATGGAAGAACATTTGAAGGACTATATA
AGGATGTAAGTGATGCAAATAAAATTCATCTTATAGGTCACAGTATGGGTGGACAAACAGTGCGTACACTTACTCAACTT
TTAAGTGAAGGTAGCGAAGAAGAGAAAAATTATAATCAAGAAAATATTTCACCATTATTTATGGGCGGTAAGCATTGGGT
TAGGAGTGTTACTACAATATCTACTCCCAATGATGGAACAACATTATCAGATTTAATCCCAGCAAAAGAATTGATAAGTA
AGTCAATTGGAGTATTAGGTTCAATAAATGGAAAAGACAATTTATCTAATTGTTTATATGATTTTAAATTAGATCAATTT
GGATTGAAAAAGCAACCAGGAGAATCATATATAAGTTATGCAAATAGAGTTAAAGATAGCAATATATGGTCAGAAACAAA
AGATATAGGGCCATATGATTTATCAACTTATGGAGCTAAAGAATTAAATAAATGGGTAAAAGCTCAACCAGATGTATATT
ATTTTTCATGGGTAACAAAGGCTACAAAAAAATTATTAATAACAGGTTATGCTGTACCACAAATAGGTCCTATGAATCCA
GCATTTTATCCAAGTGCAACTTTGATGGGAAATTATACACGTAGTTATAGGGGACCTGTTATAGATGAAGACTGGTTTGA
TAATGATGGTGTTGTGAATTCAATAAGTCAAGAAGGTCCTAGATTTGGTTCTAATGATGTAATTAAAAAATTTAATGGAC
AACCTAAAGTAGGACAATGGAATGTTATGCCAACACTTATAAATACAGATCATATGGATATAGTTGGAACATTTGGAGAT
GTAGAGGATTGGTATATTGATTATGCTGAACAATTAAGTAATTTACCTAGATAG

Upstream 100 bases:

>100_bases
CAATAATTAAAGTTTTAGGAATTTAGTAGAATATTAAATTTCTAAATAAAATCTTTATTTTAAAACTATTTAAATTTATA
TTTTAATGAGGTGAAGTGTA

Downstream 100 bases:

>100_bases
GTTTATATTTTTTAATAGGTTAATTATACTTAAAAAGAAATTAATTAAATTTATTAATAAAAATATAACTTTTAAATTTT
ATAAAGCATCTAAATATCTA

Product: lipase

Products: NA

Alternate protein names: Glycerol ester hydrolase 1 [H]

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MRRSLVKILGITALAISITFTNFSVPVMAIEPTNSIIIEDSKSSNDFISNEIENNIKSETIIENNKDNLKDESNNKEEED
QLNEIKEMLKESKTENEAESEIIEQEPLQYPDIKGDVIEDGNKYPIVLVHGFLGFGRDELLGYKYWGGLVDVQESLRDQG
YKTYTATVGPVSSNWDRACELYAYIVGGTVDYGEAHSKKYGHERYGRTFEGLYKDVSDANKIHLIGHSMGGQTVRTLTQL
LSEGSEEEKNYNQENISPLFMGGKHWVRSVTTISTPNDGTTLSDLIPAKELISKSIGVLGSINGKDNLSNCLYDFKLDQF
GLKKQPGESYISYANRVKDSNIWSETKDIGPYDLSTYGAKELNKWVKAQPDVYYFSWVTKATKKLLITGYAVPQIGPMNP
AFYPSATLMGNYTRSYRGPVIDEDWFDNDGVVNSISQEGPRFGSNDVIKKFNGQPKVGQWNVMPTLINTDHMDIVGTFGD
VEDWYIDYAEQLSNLPR

Sequences:

>Translated_497_residues
MRRSLVKILGITALAISITFTNFSVPVMAIEPTNSIIIEDSKSSNDFISNEIENNIKSETIIENNKDNLKDESNNKEEED
QLNEIKEMLKESKTENEAESEIIEQEPLQYPDIKGDVIEDGNKYPIVLVHGFLGFGRDELLGYKYWGGLVDVQESLRDQG
YKTYTATVGPVSSNWDRACELYAYIVGGTVDYGEAHSKKYGHERYGRTFEGLYKDVSDANKIHLIGHSMGGQTVRTLTQL
LSEGSEEEKNYNQENISPLFMGGKHWVRSVTTISTPNDGTTLSDLIPAKELISKSIGVLGSINGKDNLSNCLYDFKLDQF
GLKKQPGESYISYANRVKDSNIWSETKDIGPYDLSTYGAKELNKWVKAQPDVYYFSWVTKATKKLLITGYAVPQIGPMNP
AFYPSATLMGNYTRSYRGPVIDEDWFDNDGVVNSISQEGPRFGSNDVIKKFNGQPKVGQWNVMPTLINTDHMDIVGTFGD
VEDWYIDYAEQLSNLPR
>Mature_497_residues
MRRSLVKILGITALAISITFTNFSVPVMAIEPTNSIIIEDSKSSNDFISNEIENNIKSETIIENNKDNLKDESNNKEEED
QLNEIKEMLKESKTENEAESEIIEQEPLQYPDIKGDVIEDGNKYPIVLVHGFLGFGRDELLGYKYWGGLVDVQESLRDQG
YKTYTATVGPVSSNWDRACELYAYIVGGTVDYGEAHSKKYGHERYGRTFEGLYKDVSDANKIHLIGHSMGGQTVRTLTQL
LSEGSEEEKNYNQENISPLFMGGKHWVRSVTTISTPNDGTTLSDLIPAKELISKSIGVLGSINGKDNLSNCLYDFKLDQF
GLKKQPGESYISYANRVKDSNIWSETKDIGPYDLSTYGAKELNKWVKAQPDVYYFSWVTKATKKLLITGYAVPQIGPMNP
AFYPSATLMGNYTRSYRGPVIDEDWFDNDGVVNSISQEGPRFGSNDVIKKFNGQPKVGQWNVMPTLINTDHMDIVGTFGD
VEDWYIDYAEQLSNLPR

Specific function: Unknown

COG id: COG1075

COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005877 [H]

Pfam domain/function: PF04650 YSIRK_signal [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 55876; Mature: 55876

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSLVKILGITALAISITFTNFSVPVMAIEPTNSIIIEDSKSSNDFISNEIENNIKSET
CCHHHHHHHHHHEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCC
IIENNKDNLKDESNNKEEEDQLNEIKEMLKESKTENEAESEIIEQEPLQYPDIKGDVIED
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHCC
GNKYPIVLVHGFLGFGRDELLGYKYWGGLVDVQESLRDQGYKTYTATVGPVSSNWDRACE
CCCCCEEEEECCCCCCHHHHCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
LYAYIVGGTVDYGEAHSKKYGHERYGRTFEGLYKDVSDANKIHLIGHSMGGQTVRTLTQL
EEEEEECCCCCCCCHHHHHCCHHHHCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
LSEGSEEEKNYNQENISPLFMGGKHWVRSVTTISTPNDGTTLSDLIPAKELISKSIGVLG
HHCCCHHHHCCCHHCCCEEEECCHHHHHHEEEECCCCCCCCHHHHCCHHHHHHHHHCCEE
SINGKDNLSNCLYDFKLDQFGLKKQPGESYISYANRVKDSNIWSETKDIGPYDLSTYGAK
CCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHH
ELNKWVKAQPDVYYFSWVTKATKKLLITGYAVPQIGPMNPAFYPSATLMGNYTRSYRGPV
HHHHHHCCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHCCCCC
IDEDWFDNDGVVNSISQEGPRFGSNDVIKKFNGQPKVGQWNVMPTLINTDHMDIVGTFGD
CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCEECEEEEECCCCCEEEECCCC
VEDWYIDYAEQLSNLPR
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRSLVKILGITALAISITFTNFSVPVMAIEPTNSIIIEDSKSSNDFISNEIENNIKSET
CCHHHHHHHHHHEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCC
IIENNKDNLKDESNNKEEEDQLNEIKEMLKESKTENEAESEIIEQEPLQYPDIKGDVIED
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHCC
GNKYPIVLVHGFLGFGRDELLGYKYWGGLVDVQESLRDQGYKTYTATVGPVSSNWDRACE
CCCCCEEEEECCCCCCHHHHCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
LYAYIVGGTVDYGEAHSKKYGHERYGRTFEGLYKDVSDANKIHLIGHSMGGQTVRTLTQL
EEEEEECCCCCCCCHHHHHCCHHHHCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
LSEGSEEEKNYNQENISPLFMGGKHWVRSVTTISTPNDGTTLSDLIPAKELISKSIGVLG
HHCCCHHHHCCCHHCCCEEEECCHHHHHHEEEECCCCCCCCHHHHCCHHHHHHHHHCCEE
SINGKDNLSNCLYDFKLDQFGLKKQPGESYISYANRVKDSNIWSETKDIGPYDLSTYGAK
CCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHH
ELNKWVKAQPDVYYFSWVTKATKKLLITGYAVPQIGPMNPAFYPSATLMGNYTRSYRGPV
HHHHHHCCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHCCCCC
IDEDWFDNDGVVNSISQEGPRFGSNDVIKKFNGQPKVGQWNVMPTLINTDHMDIVGTFGD
CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCEECEEEEECCCCCEEEECCCC
VEDWYIDYAEQLSNLPR
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA