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The map label for this gene is gidA [H]

Identifier: 187932748

GI number: 187932748

Start: 2642976

End: 2643833

Strand: Reverse

Name: gidA [H]

Synonym: CLL_A2535

Alternate gene names: 187932748

Gene position: 2643833-2642976 (Counterclockwise)

Preceding gene: 187933486

Following gene: 187934066

Centisome position: 69.57

GC content: 27.27

Gene sequence:

>858_bases
ATGCAAGAACGATATGATATTGCAATAATAGGAAGTGGACCGGCAGGTCTTTCAGCAGCACTAAATGCCAAAATAAGAAA
TAAAAAATTTATTATTTTTGGATCTAGTAATTTAAGCTCAAAGTTAGAAAGAGCCCCTAAAATTAATAATTATTTAGGCT
TTTATGGTATAAGTGGTGAAGATTTAAAAGAAAAATTTTTAAATCATATAAATGCTATGGAAATAGATATAAAAAATGAA
CGAATAAATAACATTTATGCTATGGGAGAATATTTTACTTTAATGGGGAATGAGCAAATATATGAATCTAATACTGTAAT
AATAGCAACAGGAGTAGAATATACTAAGGCATTAGATGGAGAAGAAAAATTTTTAGGAAAAGGTGTAGGATATTGTGCTA
CATGTGATGCACCATTATATAAAGATAAAATAGTATCTATAATATCATATAATAAGGATGGAGAAAAAGATGCTAACTAT
GTTAGTGAGTTAGCAAAAACAGTCTATTATATACCTATGTATAGAGGAGAATATGATATAAATGATAAAATTACTATAAT
AGAAGATAAGCCAGTAAAAATTATAGGAGAGGAAAAGGTAGAAAAATTAATATTAAAAGAAAATAATTTAATAACTGAGG
GAGTTTTTTTGCTTAAAAACTCTATATCTCCTAAAGAATTAGTACCTGGTTTAAAAATAATAAATGGTCATGTTGAGGTT
AAAAGAAATATGGAAACTAATATAAAAGGATGTTTTGCAGCAGGAGATTGTACTGGAAAGCCATATCAATATATTAAAGC
AGCTGGAGAAGGGAATATTGCAGTGTTAAGTTCTGTTGCATATTTAGATTCAAAATAA

Upstream 100 bases:

>100_bases
TTAAAAATGGCAAACCAATAGAAACATCAATAGGATTTTTACCTAAAGAAGCTTTATCAGACTTAATTAAAGATAATTTA
TAATTTAGGAGTTTAAATTT

Downstream 100 bases:

>100_bases
ATTAATATATATTTAATACAGAGTTTATATGAAAGGAAGCATTTTAAAATGTTTAAAACATTTTAAAATGCTTTTTAATT
ATATTGGGATTTATAAATAT

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: TRXR [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQERYDIAIIGSGPAGLSAALNAKIRNKKFIIFGSSNLSSKLERAPKINNYLGFYGISGEDLKEKFLNHINAMEIDIKNE
RINNIYAMGEYFTLMGNEQIYESNTVIIATGVEYTKALDGEEKFLGKGVGYCATCDAPLYKDKIVSIISYNKDGEKDANY
VSELAKTVYYIPMYRGEYDINDKITIIEDKPVKIIGEEKVEKLILKENNLITEGVFLLKNSISPKELVPGLKIINGHVEV
KRNMETNIKGCFAAGDCTGKPYQYIKAAGEGNIAVLSSVAYLDSK

Sequences:

>Translated_285_residues
MQERYDIAIIGSGPAGLSAALNAKIRNKKFIIFGSSNLSSKLERAPKINNYLGFYGISGEDLKEKFLNHINAMEIDIKNE
RINNIYAMGEYFTLMGNEQIYESNTVIIATGVEYTKALDGEEKFLGKGVGYCATCDAPLYKDKIVSIISYNKDGEKDANY
VSELAKTVYYIPMYRGEYDINDKITIIEDKPVKIIGEEKVEKLILKENNLITEGVFLLKNSISPKELVPGLKIINGHVEV
KRNMETNIKGCFAAGDCTGKPYQYIKAAGEGNIAVLSSVAYLDSK
>Mature_285_residues
MQERYDIAIIGSGPAGLSAALNAKIRNKKFIIFGSSNLSSKLERAPKINNYLGFYGISGEDLKEKFLNHINAMEIDIKNE
RINNIYAMGEYFTLMGNEQIYESNTVIIATGVEYTKALDGEEKFLGKGVGYCATCDAPLYKDKIVSIISYNKDGEKDANY
VSELAKTVYYIPMYRGEYDINDKITIIEDKPVKIIGEEKVEKLILKENNLITEGVFLLKNSISPKELVPGLKIINGHVEV
KRNMETNIKGCFAAGDCTGKPYQYIKAAGEGNIAVLSSVAYLDSK

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787114, Length=307, Percent_Identity=28.0130293159609, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081763, Length=267, Percent_Identity=26.5917602996255, Blast_Score=88, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6320560, Length=318, Percent_Identity=23.8993710691824, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR005982 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.8.1.9 [H]

Molecular weight: Translated: 31649; Mature: 31649

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERYDIAIIGSGPAGLSAALNAKIRNKKFIIFGSSNLSSKLERAPKINNYLGFYGISGE
CCCCEEEEEEECCCCCCHHHEEEEECCCEEEEEECCCHHHHHHHCCCCCCCEEEEECCCH
DLKEKFLNHINAMEIDIKNERINNIYAMGEYFTLMGNEQIYESNTVIIATGVEYTKALDG
HHHHHHHHHCCEEEEEECCCCCCEEEEECCEEEEECCCEEEECCEEEEEECCHHHHHCCC
EEKFLGKGVGYCATCDAPLYKDKIVSIISYNKDGEKDANYVSELAKTVYYIPMYRGEYDI
CHHHHHCCCCEEEECCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHEEEEEEECCCCCC
NDKITIIEDKPVKIIGEEKVEKLILKENNLITEGVFLLKNSISPKELVPGLKIINGHVEV
CCCEEEEECCCEEEECHHHHHHHHHHCCCEEEHHHHEEECCCCHHHHCCCEEEEECEEEE
KRNMETNIKGCFAAGDCTGKPYQYIKAAGEGNIAVLSSVAYLDSK
EECCCCCCCEEEEECCCCCCCHHHEEECCCCCEEEEEEEEHHCCC
>Mature Secondary Structure
MQERYDIAIIGSGPAGLSAALNAKIRNKKFIIFGSSNLSSKLERAPKINNYLGFYGISGE
CCCCEEEEEEECCCCCCHHHEEEEECCCEEEEEECCCHHHHHHHCCCCCCCEEEEECCCH
DLKEKFLNHINAMEIDIKNERINNIYAMGEYFTLMGNEQIYESNTVIIATGVEYTKALDG
HHHHHHHHHCCEEEEEECCCCCCEEEEECCEEEEECCCEEEECCEEEEEECCHHHHHCCC
EEKFLGKGVGYCATCDAPLYKDKIVSIISYNKDGEKDANYVSELAKTVYYIPMYRGEYDI
CHHHHHCCCCEEEECCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHEEEEEEECCCCCC
NDKITIIEDKPVKIIGEEKVEKLILKENNLITEGVFLLKNSISPKELVPGLKIINGHVEV
CCCEEEEECCCEEEECHHHHHHHHHHCCCEEEHHHHEEECCCCHHHHCCCEEEEECEEEE
KRNMETNIKGCFAAGDCTGKPYQYIKAAGEGNIAVLSSVAYLDSK
EECCCCCCCEEEEECCCCCCCHHHEEECCCCCEEEEEEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]