| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932672
Identifier: 187932672
GI number: 187932672
Start: 2296737
End: 2297477
Strand: Reverse
Name: 187932672
Synonym: CLL_A2212
Alternate gene names: NA
Gene position: 2297477-2296737 (Counterclockwise)
Preceding gene: 187935478
Following gene: 187933442
Centisome position: 60.45
GC content: 26.32
Gene sequence:
>741_bases ATGAATTTTGAATACAAAGGTGAAATTATTGAGTTTCAGATTATAAGAAGAAAAAGAAAATCTATTTGTATAAAAATAGA TATAAATGGAAAAATACAAGTTGTAGCTCCTATGAGGACTTCAAAAGAACATATATTAAATTTTGTTAATTCAAAACATG ACTGGATTGTTGAAAAGAGGAGAGAGTTAAAAAGTGTTTTAAATAAGAAAGTGAAGAGAGAATTTATAGATGACGGTACT TTTATGTATTTAGGAAAAGAATATCCCATTCGATTGATTTTCAATGATAAAGTTAAGAAGATATCTATAGATTTTATTGA TGAAAGTTTAAATTCAAATATAGATAGTGACTTTCGATTTATTATAAAAACTAATACATATGAGAATGAAAAGTTGAAAA AGGCTTTAGAAAGGTGGTACAGGGGTAAGACTTTAGATATAGTTAAAAAGAGAGTAAAAGTACACGAATGGGAGTTTAAA GATAAAATAATTAAAATAACAGTTAAAGAGCAAAAAAGAAGATATGCAAGCATAAACATAAAGAATGAAGTTTACTTTAA TTGGAGAATAAGCATGGCTCCAATTGAAGTAATCGATTATATTGTTGTACATGAAATGTGCCATATGGATTTTAGAAATC ATTCAAAGCAATTTTGGAACAGGGTAGAAGAAGTCATGCCAAATTATAAGAAGCATCATGAGTATTTAAAAGAAAATGGA ATTAATATGACGATAGATTAA
Upstream 100 bases:
>100_bases TAGGAACAAAAAGTCAGTAATTGAAAATTATTACTGACTTTTTAGTTATAATTGTTAAATGATTTTGTTTAATAAAAGCT TACAATGTTGGAGGAAGTTA
Downstream 100 bases:
>100_bases TCATAGGAAAATAATAAGATTCATCAATTTTTAGTGATGAATCTTTTTTTATTTCCTTATAGTTTCCTTATAATTAGAGT TTATTCTTTTATTGTAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNFEYKGEIIEFQIIRRKRKSICIKIDINGKIQVVAPMRTSKEHILNFVNSKHDWIVEKRRELKSVLNKKVKREFIDDGT FMYLGKEYPIRLIFNDKVKKISIDFIDESLNSNIDSDFRFIIKTNTYENEKLKKALERWYRGKTLDIVKKRVKVHEWEFK DKIIKITVKEQKRRYASINIKNEVYFNWRISMAPIEVIDYIVVHEMCHMDFRNHSKQFWNRVEEVMPNYKKHHEYLKENG INMTID
Sequences:
>Translated_246_residues MNFEYKGEIIEFQIIRRKRKSICIKIDINGKIQVVAPMRTSKEHILNFVNSKHDWIVEKRRELKSVLNKKVKREFIDDGT FMYLGKEYPIRLIFNDKVKKISIDFIDESLNSNIDSDFRFIIKTNTYENEKLKKALERWYRGKTLDIVKKRVKVHEWEFK DKIIKITVKEQKRRYASINIKNEVYFNWRISMAPIEVIDYIVVHEMCHMDFRNHSKQFWNRVEEVMPNYKKHHEYLKENG INMTID >Mature_246_residues MNFEYKGEIIEFQIIRRKRKSICIKIDINGKIQVVAPMRTSKEHILNFVNSKHDWIVEKRRELKSVLNKKVKREFIDDGT FMYLGKEYPIRLIFNDKVKKISIDFIDESLNSNIDSDFRFIIKTNTYENEKLKKALERWYRGKTLDIVKKRVKVHEWEFK DKIIKITVKEQKRRYASINIKNEVYFNWRISMAPIEVIDYIVVHEMCHMDFRNHSKQFWNRVEEVMPNYKKHHEYLKENG INMTID
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29997; Mature: 29997
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEYKGEIIEFQIIRRKRKSICIKIDINGKIQVVAPMRTSKEHILNFVNSKHDWIVEKR CCCCCCCCEEHHHHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHH RELKSVLNKKVKREFIDDGTFMYLGKEYPIRLIFNDKVKKISIDFIDESLNSNIDSDFRF HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCEEEEEEEHHHHHCCCCCCCEEE IIKTNTYENEKLKKALERWYRGKTLDIVKKRVKVHEWEFKDKIIKITVKEQKRRYASINI EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCEECCCEEEEEEEEHHCCCEEEEEE KNEVYFNWRISMAPIEVIDYIVVHEMCHMDFRNHSKQFWNRVEEVMPNYKKHHEYLKENG CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC INMTID CEEEEC >Mature Secondary Structure MNFEYKGEIIEFQIIRRKRKSICIKIDINGKIQVVAPMRTSKEHILNFVNSKHDWIVEKR CCCCCCCCEEHHHHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHH RELKSVLNKKVKREFIDDGTFMYLGKEYPIRLIFNDKVKKISIDFIDESLNSNIDSDFRF HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCEEEEEEEHHHHHCCCCCCCEEE IIKTNTYENEKLKKALERWYRGKTLDIVKKRVKVHEWEFKDKIIKITVKEQKRRYASINI EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCEECCCEEEEEEEEHHCCCEEEEEE KNEVYFNWRISMAPIEVIDYIVVHEMCHMDFRNHSKQFWNRVEEVMPNYKKHHEYLKENG CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC INMTID CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA