| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ykuE [H]
Identifier: 187932566
GI number: 187932566
Start: 2242843
End: 2243715
Strand: Reverse
Name: ykuE [H]
Synonym: CLL_A2152
Alternate gene names: 187932566
Gene position: 2243715-2242843 (Counterclockwise)
Preceding gene: 187933317
Following gene: 187935299
Centisome position: 59.04
GC content: 28.06
Gene sequence:
>873_bases GTGAATATTATAAAAAAAATATCAAGAAGAATCGTTGTATTATTTTTTGCAATAATGTTTCTTATTGGATTTATATTTTT TTGTATCTGGCAAAACAATAGTATTATTATTTCGAAATTTGATTATGTAAGCTCTAAGATACCAGATGAATTTAATGATT TTACAATAGTTCATATTTCTGATTTACACAATAAAATGTTTGGCGAAAATCAAGTTAAGATATTAAATAAAGTTAAAAGT ATTTCCCCAGATGTAATTGTTATTACAGGTGATTTAATAGACAGACGTAAATATAATTTAGATACTGCAATGATGTTTGT TTCAGGAGCTACAAAAATAGCGCCTGTATATTATGTATCAGGTAATCACGAAGCTTGGTCTGGAAAATTTTCTATGATTA AAGAAAAATTGATAGATATAGGTGTTCACATTGTTGATAATACAGCATTTAAACTTTCAAGGGGGAACAGTTCAATACAC ATATTAGGATTATCGGATCCAGATTTTCTTACATCTGATTACATGGATGGTACAAACACCAATAAAATGAAAGAACAATT AAATAGATGGTCAACGAATGAAAATTTTAAAATACTACTTTCTCATAGGCCAGAACTATTTGACTTATATTATGAAAACA ATATGGATTTAATTTTTACAGGACATGCTCATGGAGGACAAGTCAGAATTCCTGGGATAGGTGGATTATTTGCTCCAGAT CAAGGAATATTTCCTAAGTATACAAGTGGAATATATAATAAAGATTTATCTACAATGTTTGTAAGTAGAGGATTGGGTAA TAGTATTTGTCCTTTAAGGATTTTTAATAGACCAGAAATCGTTGAAGTAACATTAAATAACAGTCAGCATTAA
Upstream 100 bases:
>100_bases GTTTTGATTGAAATAAGAGAATTACTTAAAAAGCAAGATAAAGGTTTATAATAATCACAATTATATATCTTATTAATGTA TAGAAAAATAGTGATAAGAG
Downstream 100 bases:
>100_bases TTGAAAAAATTGATTTTAGGAATGATTTTGGTGCTGATTTGTTTATGTATGCAGGACAAAGTTAAATAAGTTGATTAGAA ATATAAAGAGTTGTAATGAT
Product: phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHISDLHNKMFGENQVKILNKVKS ISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVSGNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIH ILGLSDPDFLTSDYMDGTNTNKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH
Sequences:
>Translated_290_residues MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHISDLHNKMFGENQVKILNKVKS ISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVSGNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIH ILGLSDPDFLTSDYMDGTNTNKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH >Mature_290_residues MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHISDLHNKMFGENQVKILNKVKS ISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVSGNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIH ILGLSDPDFLTSDYMDGTNTNKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=264, Percent_Identity=25, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI210031210, Length=261, Percent_Identity=24.904214559387, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081695, Length=245, Percent_Identity=26.1224489795918, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115535028, Length=290, Percent_Identity=25.1724137931034, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 33019; Mature: 33019
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHIS CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHCCCCCCCCEEEEEEE DLHNKMFGENQVKILNKVKSISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVS HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHEEEEECCCCEEEEEEEEC GNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIHILGLSDPDFLTSDYMDGTNT CCCCCCCCHHHHHHHHHHHHCEEEECCCEEEEECCCCEEEEEECCCCCCCHHCCCCCCCC NKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD HHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCC QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH CCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCC >Mature Secondary Structure MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHIS CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHCCCCCCCCEEEEEEE DLHNKMFGENQVKILNKVKSISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVS HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHEEEEECCCCEEEEEEEEC GNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIHILGLSDPDFLTSDYMDGTNT CCCCCCCCHHHHHHHHHHHHCEEEECCCEEEEECCCCEEEEEECCCCCCCHHCCCCCCCC NKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD HHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCC QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH CCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]