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The map label for this gene is mcp4 [H]

Identifier: 187932454

GI number: 187932454

Start: 3454347

End: 3455591

Strand: Reverse

Name: mcp4 [H]

Synonym: CLL_A3291

Alternate gene names: 187932454

Gene position: 3455591-3454347 (Counterclockwise)

Preceding gene: 187934443

Following gene: 187935356

Centisome position: 90.93

GC content: 28.84

Gene sequence:

>1245_bases
ATGATAAAAGCTGTTAGTATAAAAATAAAAATTCTTATACTGTATATACTTACCTTTTCAGTAGGGATAACTATAGGAGT
TATGTTTTCTACTGATTTTAAAATGGAATTTATATTTTTAATTTTATCAATAATAGTTATCGCACTTATCTTAATGATTT
CAATTAAGAATATTATAACTCCATTAAATGAAATTAAGTCTTTAGCTCAAAGAATGGGAGAGGGAGATTTATCAACTGAT
ATAACAAGCAAAAGACATGATGAATTTGGACAAATAGTGTTAGGATTAAATAAAGCACAAGGAAATATTAGAAAAATAAT
CAAAGAGACCATAAATAAATCTTCAAATACTTCTGCTTTAAGTCAACAAATATCTGCATCCATTCAAGAATTAACATCAA
ATATGGAAAATATGGACATGTCAACTGCTAAAATAGTAAGTGGAATAGAAGACAATAGTAGCACTATTGAAGAATTATCT
GCATCTGTACAAGAAATTAATGCAAGTATGGAAGAGTTAGCAGAAAAGGCACAGACATCAAATGAGAATTCAGAAAAAAT
AAAACAAAAAGCTGATGAAATAGAAATTCATAGTAAAACTATAATTGAAGATGCCAAAAATGTATGTGTTGAAAAAGAAC
AATGTATTTTAGAAGCAATTGAAGATGCAAAGGTTGTAGAAGAAATAAAAGTTATGGCTGATGCAATAAATGTTATAGCT
AAGCAAACTAATCTTTTAGCTTTAAATGCAGCAATTGAATCTGCTAGAGCTGGTGAAGCTGGAAAGGGATTTGCAGTAGT
TGCAGATGAAGTTAGAAAATTAGCTGAAGAATCTTCAAAGACAGTTATTACTATTCAAAACACAATTGATAAGGTAGAAG
ATGCCTTTAATAATCTTTCAGTTAACACTAAAGATATTTTATATTTTATTAAAAATGATATAAATGACATACTTTTAAAA
TATGAAGCTGTAGGAAAATCTTATGAAAAAGATGGATATTTTGTTAATGAAATGTCAACTCGGTTATCTTCAATGTCTCA
AGAAATAGGGGCATCAATGGAGCAAATTAGTGCAGCAATTGAAAGTACAGCAAAGAATGCAGAAGTGACAACAGAGCATT
CCCATAAGATAAAGGCTGGATTACATGGTACATCACAAGCTATGGATGAGGTTGCAATAGTAGTACAACAAGAAGCAGAA
CTTTCACAGGATTTAAGTGAATTAGTAAAAGAATTTAAATTATAA

Upstream 100 bases:

>100_bases
AATTACGCTACACATTATATAAATATATAATTTCAGAAAAAAAGTGATATAATTGAATTATTTACAAAATTAATATATTT
AGTGGGAGGTTTATTGTCAA

Downstream 100 bases:

>100_bases
TTAATTTTATACAATAGAAGTATAAATAAATATGGATAAGTATTTTAATCATTATTATATTAAAATACTTATCCATATTT
TTATTTTAAATTTTTAACAC

Product: membrane associated chemotaxis sensory transducer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MIKAVSIKIKILILYILTFSVGITIGVMFSTDFKMEFIFLILSIIVIALILMISIKNIITPLNEIKSLAQRMGEGDLSTD
ITSKRHDEFGQIVLGLNKAQGNIRKIIKETINKSSNTSALSQQISASIQELTSNMENMDMSTAKIVSGIEDNSSTIEELS
ASVQEINASMEELAEKAQTSNENSEKIKQKADEIEIHSKTIIEDAKNVCVEKEQCILEAIEDAKVVEEIKVMADAINVIA
KQTNLLALNAAIESARAGEAGKGFAVVADEVRKLAEESSKTVITIQNTIDKVEDAFNNLSVNTKDILYFIKNDINDILLK
YEAVGKSYEKDGYFVNEMSTRLSSMSQEIGASMEQISAAIESTAKNAEVTTEHSHKIKAGLHGTSQAMDEVAIVVQQEAE
LSQDLSELVKEFKL

Sequences:

>Translated_414_residues
MIKAVSIKIKILILYILTFSVGITIGVMFSTDFKMEFIFLILSIIVIALILMISIKNIITPLNEIKSLAQRMGEGDLSTD
ITSKRHDEFGQIVLGLNKAQGNIRKIIKETINKSSNTSALSQQISASIQELTSNMENMDMSTAKIVSGIEDNSSTIEELS
ASVQEINASMEELAEKAQTSNENSEKIKQKADEIEIHSKTIIEDAKNVCVEKEQCILEAIEDAKVVEEIKVMADAINVIA
KQTNLLALNAAIESARAGEAGKGFAVVADEVRKLAEESSKTVITIQNTIDKVEDAFNNLSVNTKDILYFIKNDINDILLK
YEAVGKSYEKDGYFVNEMSTRLSSMSQEIGASMEQISAAIESTAKNAEVTTEHSHKIKAGLHGTSQAMDEVAIVVQQEAE
LSQDLSELVKEFKL
>Mature_414_residues
MIKAVSIKIKILILYILTFSVGITIGVMFSTDFKMEFIFLILSIIVIALILMISIKNIITPLNEIKSLAQRMGEGDLSTD
ITSKRHDEFGQIVLGLNKAQGNIRKIIKETINKSSNTSALSQQISASIQELTSNMENMDMSTAKIVSGIEDNSSTIEELS
ASVQEINASMEELAEKAQTSNENSEKIKQKADEIEIHSKTIIEDAKNVCVEKEQCILEAIEDAKVVEEIKVMADAINVIA
KQTNLLALNAAIESARAGEAGKGFAVVADEVRKLAEESSKTVITIQNTIDKVEDAFNNLSVNTKDILYFIKNDINDILLK
YEAVGKSYEKDGYFVNEMSTRLSSMSQEIGASMEQISAAIESTAKNAEVTTEHSHKIKAGLHGTSQAMDEVAIVVQQEAE
LSQDLSELVKEFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=340, Percent_Identity=28.5294117647059, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI2367378, Length=271, Percent_Identity=29.520295202952, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787690, Length=257, Percent_Identity=27.6264591439689, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788195, Length=226, Percent_Identity=29.2035398230088, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789453, Length=265, Percent_Identity=27.1698113207547, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 45449; Mature: 45449

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAVSIKIKILILYILTFSVGITIGVMFSTDFKMEFIFLILSIIVIALILMISIKNIIT
CCCEEEHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLNEIKSLAQRMGEGDLSTDITSKRHDEFGQIVLGLNKAQGNIRKIIKETINKSSNTSAL
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCHHHH
SQQISASIQELTSNMENMDMSTAKIVSGIEDNSSTIEELSASVQEINASMEELAEKAQTS
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NENSEKIKQKADEIEIHSKTIIEDAKNVCVEKEQCILEAIEDAKVVEEIKVMADAINVIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTNLLALNAAIESARAGEAGKGFAVVADEVRKLAEESSKTVITIQNTIDKVEDAFNNLS
HHCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCC
VNTKDILYFIKNDINDILLKYEAVGKSYEKDGYFVNEMSTRLSSMSQEIGASMEQISAAI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
ESTAKNAEVTTEHSHKIKAGLHGTSQAMDEVAIVVQQEAELSQDLSELVKEFKL
HHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKAVSIKIKILILYILTFSVGITIGVMFSTDFKMEFIFLILSIIVIALILMISIKNIIT
CCCEEEHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLNEIKSLAQRMGEGDLSTDITSKRHDEFGQIVLGLNKAQGNIRKIIKETINKSSNTSAL
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCHHHH
SQQISASIQELTSNMENMDMSTAKIVSGIEDNSSTIEELSASVQEINASMEELAEKAQTS
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NENSEKIKQKADEIEIHSKTIIEDAKNVCVEKEQCILEAIEDAKVVEEIKVMADAINVIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTNLLALNAAIESARAGEAGKGFAVVADEVRKLAEESSKTVITIQNTIDKVEDAFNNLS
HHCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCC
VNTKDILYFIKNDINDILLKYEAVGKSYEKDGYFVNEMSTRLSSMSQEIGASMEQISAAI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
ESTAKNAEVTTEHSHKIKAGLHGTSQAMDEVAIVVQQEAELSQDLSELVKEFKL
HHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]