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The map label for this gene is yccF [H]

Identifier: 187932431

GI number: 187932431

Start: 1854208

End: 1854570

Strand: Reverse

Name: yccF [H]

Synonym: CLL_A1770

Alternate gene names: 187932431

Gene position: 1854570-1854208 (Counterclockwise)

Preceding gene: 187934803

Following gene: 187934933

Centisome position: 48.8

GC content: 30.3

Gene sequence:

>363_bases
ATGAGCTGTTTAGGAAATATTATTTGGTTTATTTTTGGAGGATTTGTTAATGCAATTGGTTGGTTTTTTACAGGAATCTT
TTGGTGCATAACTATAATTGGTATTCCTATTGGTCTTCAATGTTTTAAAATGGCAGGATTACAACTTGCTCCTTTCGGAA
AAGAAGTTGTAGAGACTGATTCTAGTGGCACAAGCTTTCTTTTAAATATATTATGGATTATATTTGGTGGATTAGGGCTT
TGCATCTCTAACCTTTTAAGTGCATTATTATTATGCATTACTATAGTTGGAATACCTTTTGCAATTCAATCATTAAAACT
AGCAAAATTATCTTTAATGCCTTTTGGTAAGGAACTTATATAA

Upstream 100 bases:

>100_bases
CCTTAATTTAAGCTTAAATAATATGATTTACTACACTTTAATTTTAAAATTCTAGTATAATATATTAGTAAAAAATATTA
GTAGATTTGAGGTATTATTA

Downstream 100 bases:

>100_bases
GAAACAGACCTGCATAAAGGTAATATGATTTATGCAGGTCCTATTTTTTATTATTTACTTCTAACTTCTTTTAGTTTATC
CTCTATAAATTTTATTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSCLGNIIWFIFGGFVNAIGWFFTGIFWCITIIGIPIGLQCFKMAGLQLAPFGKEVVETDSSGTSFLLNILWIIFGGLGL
CISNLLSALLLCITIVGIPFAIQSLKLAKLSLMPFGKELI

Sequences:

>Translated_120_residues
MSCLGNIIWFIFGGFVNAIGWFFTGIFWCITIIGIPIGLQCFKMAGLQLAPFGKEVVETDSSGTSFLLNILWIIFGGLGL
CISNLLSALLLCITIVGIPFAIQSLKLAKLSLMPFGKELI
>Mature_119_residues
SCLGNIIWFIFGGFVNAIGWFFTGIFWCITIIGIPIGLQCFKMAGLQLAPFGKEVVETDSSGTSFLLNILWIIFGGLGLC
ISNLLSALLLCITIVGIPFAIQSLKLAKLSLMPFGKELI

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=130, Percent_Identity=31.5384615384615, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 12992; Mature: 12861

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCLGNIIWFIFGGFVNAIGWFFTGIFWCITIIGIPIGLQCFKMAGLQLAPFGKEVVETD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHCC
SSGTSFLLNILWIIFGGLGLCISNLLSALLLCITIVGIPFAIQSLKLAKLSLMPFGKELI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SCLGNIIWFIFGGFVNAIGWFFTGIFWCITIIGIPIGLQCFKMAGLQLAPFGKEVVETD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHCC
SSGTSFLLNILWIIFGGLGLCISNLLSALLLCITIVGIPFAIQSLKLAKLSLMPFGKELI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]