| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932327
Identifier: 187932327
GI number: 187932327
Start: 3361227
End: 3361778
Strand: Reverse
Name: 187932327
Synonym: CLL_A3221
Alternate gene names: NA
Gene position: 3361778-3361227 (Counterclockwise)
Preceding gene: 187935043
Following gene: 187934652
Centisome position: 88.46
GC content: 22.46
Gene sequence:
>552_bases TTGAAAAAGAAATCTTCATATTTAAAGAAAATATTAAGTAAAATATGTTTAGGAGATAAATGTTTAATTATATTTATGAT AATTATATTTTTTCATGTAACATTTGACCTATTTATAGGTGGTAATGGAATAAATTCTGAAGAAACAGTAAATGGGATAG ATATAATAGTGAGAACTACAATTGCATCTATATTCGGATATTTTATAAGTTCAAATTTTGTGAAGGATAAAAAAGAAGTT TTATATGAAAAAGAAAGTAATAAATACTGTTTAGAGAATAAAAACAGTAATAAAGCCTATTTGAATGATAATAATAAGGT AATTATAAATAATAATAATGAAAATTTAGAGGATGAAAATAAAAAGAGTCGTGCAAGTGAAGAACAAATTGTTATTGTTT TCATAATTGGATTAGTTTCATTAATATTATTACTTTTAGTAAGAGATTTCATACAAGTTTCTGATTTGGATATTCCTATA ATATCTCAATTAAGAGATATTGTTTGTGGATGTGTAGGGTTTTTATTAGGATGTCCTTCAAATCATAAGTAA
Upstream 100 bases:
>100_bases GTTAATAGTATCCGTAATAAATAAGATAGTTATATCACTTGTGATTTTTTTTCATATTATAAAATTAAAAAGTAGTTCTT TTTAATTGAGGTGCTTAATT
Downstream 100 bases:
>100_bases AGTTTGTTATGATTATATTATAAAATATTACTATTTAGTAATTTAGATATTAAATAGTGATATTTTACATAAAAAACTTA CATATGGAGGATAATAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKKKSSYLKKILSKICLGDKCLIIFMIIIFFHVTFDLFIGGNGINSEETVNGIDIIVRTTIASIFGYFISSNFVKDKKEV LYEKESNKYCLENKNSNKAYLNDNNKVIINNNNENLEDENKKSRASEEQIVIVFIIGLVSLILLLLVRDFIQVSDLDIPI ISQLRDIVCGCVGFLLGCPSNHK
Sequences:
>Translated_183_residues MKKKSSYLKKILSKICLGDKCLIIFMIIIFFHVTFDLFIGGNGINSEETVNGIDIIVRTTIASIFGYFISSNFVKDKKEV LYEKESNKYCLENKNSNKAYLNDNNKVIINNNNENLEDENKKSRASEEQIVIVFIIGLVSLILLLLVRDFIQVSDLDIPI ISQLRDIVCGCVGFLLGCPSNHK >Mature_183_residues MKKKSSYLKKILSKICLGDKCLIIFMIIIFFHVTFDLFIGGNGINSEETVNGIDIIVRTTIASIFGYFISSNFVKDKKEV LYEKESNKYCLENKNSNKAYLNDNNKVIINNNNENLEDENKKSRASEEQIVIVFIIGLVSLILLLLVRDFIQVSDLDIPI ISQLRDIVCGCVGFLLGCPSNHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20733; Mature: 20733
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSSYLKKILSKICLGDKCLIIFMIIIFFHVTFDLFIGGNGINSEETVNGIDIIVRTT CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IASIFGYFISSNFVKDKKEVLYEKESNKYCLENKNSNKAYLNDNNKVIINNNNENLEDEN HHHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCEEEEECCCCCCCCHH KKSRASEEQIVIVFIIGLVSLILLLLVRDFIQVSDLDIPIISQLRDIVCGCVGFLLGCPS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC NHK CCC >Mature Secondary Structure MKKKSSYLKKILSKICLGDKCLIIFMIIIFFHVTFDLFIGGNGINSEETVNGIDIIVRTT CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IASIFGYFISSNFVKDKKEVLYEKESNKYCLENKNSNKAYLNDNNKVIINNNNENLEDEN HHHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCEEEEECCCCCCCCHH KKSRASEEQIVIVFIIGLVSLILLLLVRDFIQVSDLDIPIISQLRDIVCGCVGFLLGCPS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC NHK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA