Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918555
Identifier: 187918555
GI number: 187918555
Start: 745043
End: 745873
Strand: Direct
Name: 187918555
Synonym: BH0699A
Alternate gene names: NA
Gene position: 745043-745873 (Clockwise)
Preceding gene: 187918554
Following gene: 187918556
Centisome position: 80.78
GC content: 25.87
Gene sequence:
>831_bases TTGATATTAAGAAGCTTAAATAACACTCAAGTATCCAAAGTTACTTTAAATAAAAATGTTCCTTTGAATGGGAGATTGGA AATTGTTAAGTCCCTTGGTCTTAATAAGTGGCTTGTATCCTTTTTAGGCAACTGTTTTGAAGTAAAGAGTAGTTTGCCTT TAAAAGTTGGATTTACGTATTTTGCCAAGATGATTAGTACTTCAGGTAATTTTTTGATTCATGTTAATTATGCATCTTTA TTTAGGGATTTAGATTTATTTGAAAGTAATAATAAGGTTATACTTAAACTAAGAGGTGAACCCTTGGAGCAAAATACTTG GAAGTTATTTAAGAATGTTTTTGATAATATAAAAGATGAATTTATTTTAAAGTTTCTTTTAGCTTTGCATGAACAAGGCA TAAGAGAACAGGATTTTATGCAAATTTATGATTATTTTGGTAGTAAAGTAAGGGAAAGAGAACAGTATAATAAGCTTCCA GTTTTTATTGAAAGCAATAATAATTTTATTATTGCAATTCCCTTTAGATTTATGGAAGGAAATGGTTTATTATTTTTATT TTCTTATAAAGATTTAGAGATGGTTTATAAGTGGAGTTTTGTTTATTTTTTGAATGAACAAGAAAAAATAATTTGTGAGA TTAATAATTCCGGTTCTAATTTTAAATTAAGAATATATGCAGATTTTAGTTTAAGTAAGATCATTAGAGAGCTTAAGAGT TCTCTTTTTTGCTATAATGTGACTGATATAGAAATATTAGATTCAATTCAAGAGTTTGAAGATTTTGATTGTGAAGTAAT AGTGGTTAAGGGTATTAATTATAAAATATGA
Upstream 100 bases:
>100_bases GAAAAAGTTCAGGTTTTAAAGCGAGGAAAGGTAAGACGGGCTAAACTTTATTATATGAGAAATAGAATTGGTAAAGCTGC TATGAAGGTGAAAGAGCGTC
Downstream 100 bases:
>100_bases GTGGAGAAAAATTAGCTTTATTGATTAAATATGATACTAAATTTCCAGCGCCTTTTATTTTAGCTAAGGCCAGAGGAGAG AAGGCTTTGCGCATTAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MILRSLNNTQVSKVTLNKNVPLNGRLEIVKSLGLNKWLVSFLGNCFEVKSSLPLKVGFTYFAKMISTSGNFLIHVNYASL FRDLDLFESNNKVILKLRGEPLEQNTWKLFKNVFDNIKDEFILKFLLALHEQGIREQDFMQIYDYFGSKVREREQYNKLP VFIESNNNFIIAIPFRFMEGNGLLFLFSYKDLEMVYKWSFVYFLNEQEKIICEINNSGSNFKLRIYADFSLSKIIRELKS SLFCYNVTDIEILDSIQEFEDFDCEVIVVKGINYKI
Sequences:
>Translated_276_residues MILRSLNNTQVSKVTLNKNVPLNGRLEIVKSLGLNKWLVSFLGNCFEVKSSLPLKVGFTYFAKMISTSGNFLIHVNYASL FRDLDLFESNNKVILKLRGEPLEQNTWKLFKNVFDNIKDEFILKFLLALHEQGIREQDFMQIYDYFGSKVREREQYNKLP VFIESNNNFIIAIPFRFMEGNGLLFLFSYKDLEMVYKWSFVYFLNEQEKIICEINNSGSNFKLRIYADFSLSKIIRELKS SLFCYNVTDIEILDSIQEFEDFDCEVIVVKGINYKI >Mature_276_residues MILRSLNNTQVSKVTLNKNVPLNGRLEIVKSLGLNKWLVSFLGNCFEVKSSLPLKVGFTYFAKMISTSGNFLIHVNYASL FRDLDLFESNNKVILKLRGEPLEQNTWKLFKNVFDNIKDEFILKFLLALHEQGIREQDFMQIYDYFGSKVREREQYNKLP VFIESNNNFIIAIPFRFMEGNGLLFLFSYKDLEMVYKWSFVYFLNEQEKIICEINNSGSNFKLRIYADFSLSKIIRELKS SLFCYNVTDIEILDSIQEFEDFDCEVIVVKGINYKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32443; Mature: 32443
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRSLNNTQVSKVTLNKNVPLNGRLEIVKSLGLNKWLVSFLGNCFEVKSSLPLKVGFTY CEEECCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHH FAKMISTSGNFLIHVNYASLFRDLDLFESNNKVILKLRGEPLEQNTWKLFKNVFDNIKDE HHHHHHCCCCEEEEEEHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH FILKFLLALHEQGIREQDFMQIYDYFGSKVREREQYNKLPVFIESNNNFIIAIPFRFMEG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEEECC NGLLFLFSYKDLEMVYKWSFVYFLNEQEKIICEINNSGSNFKLRIYADFSLSKIIRELKS CCEEEEEECCCEEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHH SLFCYNVTDIEILDSIQEFEDFDCEVIVVKGINYKI CEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MILRSLNNTQVSKVTLNKNVPLNGRLEIVKSLGLNKWLVSFLGNCFEVKSSLPLKVGFTY CEEECCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHH FAKMISTSGNFLIHVNYASLFRDLDLFESNNKVILKLRGEPLEQNTWKLFKNVFDNIKDE HHHHHHCCCCEEEEEEHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH FILKFLLALHEQGIREQDFMQIYDYFGSKVREREQYNKLPVFIESNNNFIIAIPFRFMEG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEEECC NGLLFLFSYKDLEMVYKWSFVYFLNEQEKIICEINNSGSNFKLRIYADFSLSKIIRELKS CCEEEEEECCCEEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHH SLFCYNVTDIEILDSIQEFEDFDCEVIVVKGINYKI CEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA