Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918453
Identifier: 187918453
GI number: 187918453
Start: 620066
End: 620773
Strand: Direct
Name: 187918453
Synonym: BH0592
Alternate gene names: NA
Gene position: 620066-620773 (Clockwise)
Preceding gene: 187918450
Following gene: 187918454
Centisome position: 67.23
GC content: 26.41
Gene sequence:
>708_bases ATGACATTATTAAATAAATACCCTTTAAGGTATGCTTGTTTGGAGATTTTATTATCTTATTTTATAGTTTCTCGTATTTC TCCTTTTGATTATGTTGGCGTTGATCTTTGGAATTTTAGTATAAACCATTATTATTATTGGTTATATAGTGCTTTTTTAA TTATTTTCATTATATATTTTGCTAAATTAACAAGTTCTTATGATTTTAGAGATGAGTTTTTTATTCCTGAATTTAAGCCC ATTTTTATTTGTCAAGCATTTTTAATTTTTGTCAAGTTGCTTATTTATATTTTTTTTCTATTGATTATTTTATGTTTATG TATTTTGTATTGTTTCCCAGAATCATTGCGATTGTGGGTTGAAGCGGGTAGCTCTGGTTTTATGTGGAATATAGGCAGTA AGCAATCACTTGCTTTAATGGTTATTACTTCTCTTTTTACAGGAGGAGTTGAAGAATTGTTTTACAGGGCTTTTATTATT ACTAAACTTAAACAGGTAGGGGTTGCTTCATTAATTGCAGCTTTTCTTGGTAGTATTATTTTTGCTTATGGACATTTTTA TTATGGATTTATTGGGTTTTTCTTTGCATTAATTTTTGGGGGGATTTTATCCTATATATATTTGACACATAAGAATATAT ATTATTCGGTTTTTGTTCATAGTTTTTATAATATCTTTGTTAGTGTGTTGCTTTTTTTGTTAAATTAG
Upstream 100 bases:
>100_bases TAAGAAGTATATTTTAAATATATCAAAAATATATCAGATCATTTTTAGATTAATTATTATAAAGTTTGACAATCTTATAT TTATGTATCTATAATTTATT
Downstream 100 bases:
>100_bases TTAAGGAGGATTTATGCTGGATACTATACCTAAGCGCTTTAGGGAGATTGTGGGATTTTATGGTGATCTTGATATTTTTA TTTATAAAGAGAATGAGTCT
Product: CAAX amino terminal protease family
Products: NA
Alternate protein names: Caax Amino Protease Family Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTLLNKYPLRYACLEILLSYFIVSRISPFDYVGVDLWNFSINHYYYWLYSAFLIIFIIYFAKLTSSYDFRDEFFIPEFKP IFICQAFLIFVKLLIYIFFLLIILCLCILYCFPESLRLWVEAGSSGFMWNIGSKQSLALMVITSLFTGGVEELFYRAFII TKLKQVGVASLIAAFLGSIIFAYGHFYYGFIGFFFALIFGGILSYIYLTHKNIYYSVFVHSFYNIFVSVLLFLLN
Sequences:
>Translated_235_residues MTLLNKYPLRYACLEILLSYFIVSRISPFDYVGVDLWNFSINHYYYWLYSAFLIIFIIYFAKLTSSYDFRDEFFIPEFKP IFICQAFLIFVKLLIYIFFLLIILCLCILYCFPESLRLWVEAGSSGFMWNIGSKQSLALMVITSLFTGGVEELFYRAFII TKLKQVGVASLIAAFLGSIIFAYGHFYYGFIGFFFALIFGGILSYIYLTHKNIYYSVFVHSFYNIFVSVLLFLLN >Mature_234_residues TLLNKYPLRYACLEILLSYFIVSRISPFDYVGVDLWNFSINHYYYWLYSAFLIIFIIYFAKLTSSYDFRDEFFIPEFKPI FICQAFLIFVKLLIYIFFLLIILCLCILYCFPESLRLWVEAGSSGFMWNIGSKQSLALMVITSLFTGGVEELFYRAFIIT KLKQVGVASLIAAFLGSIIFAYGHFYYGFIGFFFALIFGGILSYIYLTHKNIYYSVFVHSFYNIFVSVLLFLLN
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27583; Mature: 27452
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLNKYPLRYACLEILLSYFIVSRISPFDYVGVDLWNFSINHYYYWLYSAFLIIFIIYF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHH AKLTSSYDFRDEFFIPEFKPIFICQAFLIFVKLLIYIFFLLIILCLCILYCFPESLRLWV HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EAGSSGFMWNIGSKQSLALMVITSLFTGGVEELFYRAFIITKLKQVGVASLIAAFLGSII HCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAYGHFYYGFIGFFFALIFGGILSYIYLTHKNIYYSVFVHSFYNIFVSVLLFLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TLLNKYPLRYACLEILLSYFIVSRISPFDYVGVDLWNFSINHYYYWLYSAFLIIFIIYF CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHH AKLTSSYDFRDEFFIPEFKPIFICQAFLIFVKLLIYIFFLLIILCLCILYCFPESLRLWV HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EAGSSGFMWNIGSKQSLALMVITSLFTGGVEELFYRAFIITKLKQVGVASLIAAFLGSII HCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAYGHFYYGFIGFFFALIFGGILSYIYLTHKNIYYSVFVHSFYNIFVSVLLFLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA