Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918419
Identifier: 187918419
GI number: 187918419
Start: 577170
End: 578033
Strand: Direct
Name: 187918419
Synonym: BH0556
Alternate gene names: NA
Gene position: 577170-578033 (Clockwise)
Preceding gene: 187918418
Following gene: 187918420
Centisome position: 62.58
GC content: 23.73
Gene sequence:
>864_bases ATGAGTGGTGTTAAGGTATATTATCCAGAAAATTTTAATGCACTTGTTAGCTTGTTTAAGGAAGATTCAAACAGTTATAT AGTTTATAATGAGATTGATTTTCATAAAAATGCTGCAATTTTTATGAAAAATGATATTTCTGATAACTTTTTTATAATTA ATAATTTTGAAAGATTTAATAAAGTTTCTCTTAAGAGTAATTTTTTGGAAATGGGACCTTGTGTTACTTATGATGCGATA TTGCAATTTGGAGAGAGAAACATTCCAAGGTTATTTTATGAATTTATTTCAAGACTGAATGATAGGATATATCTAAATAG CATTAATATTGCTAATGGATTTTATTATAAGAACACAGTATTTGATTTATATCCTTTGTTATTAAGTCTTGATGCCCAGC TTGAATTTAAAAATATTTTGACTAAAAAAACTTATACTTATAATGCTTACAGTATTAACAGAGATGATTACATACAAAGT CGTCATACTTTGTTTTTAAATAAATTAAAATTTCCAATTACGAATTTATGGAATAAGAGTTTTTATAGCAAAATATTTGT TGATACTTTTTCATCTGATATTTTAGAAGAAGTAAACATTATTTTTATTTGCGTTCTTTTGAATGTTAAAAGAGATATTA TAAGTGATTTTCTGATGAAAATATTTTATAATGACAAAGTTATTACTTTAAGGGATTCTCAAGTTTTACTTCTTAATAAA TCTTTGCCTTTATCTCTAGTTGAAATTGAAGATTCTCTTAAGATGCTAGATAGGAATATGAGAGATGTTAAAAACTTTAA CTTCGGGGAGAGAAGTTTAAGACTTATAAAAAATTTTTATTTCGATATATTATTTAATTTTTAG
Upstream 100 bases:
>100_bases GGACTGATATTTTGGGATATTATAATACATTAAAATGTAATTGTCTTGATGTTAATACTTTTTTAGATCTTTATTTGCGA TTGGAAGAGTTAGAGAGAAA
Downstream 100 bases:
>100_bases TATTATCAATAGTATTATAAAAATTAGCATTATTAAATATTAAATAATTGCCGGTTTTTTGGCATAGTTTTAATATAAAA GCAATGGAATTGATGTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSGVKVYYPENFNALVSLFKEDSNSYIVYNEIDFHKNAAIFMKNDISDNFFIINNFERFNKVSLKSNFLEMGPCVTYDAI LQFGERNIPRLFYEFISRLNDRIYLNSINIANGFYYKNTVFDLYPLLLSLDAQLEFKNILTKKTYTYNAYSINRDDYIQS RHTLFLNKLKFPITNLWNKSFYSKIFVDTFSSDILEEVNIIFICVLLNVKRDIISDFLMKIFYNDKVITLRDSQVLLLNK SLPLSLVEIEDSLKMLDRNMRDVKNFNFGERSLRLIKNFYFDILFNF
Sequences:
>Translated_287_residues MSGVKVYYPENFNALVSLFKEDSNSYIVYNEIDFHKNAAIFMKNDISDNFFIINNFERFNKVSLKSNFLEMGPCVTYDAI LQFGERNIPRLFYEFISRLNDRIYLNSINIANGFYYKNTVFDLYPLLLSLDAQLEFKNILTKKTYTYNAYSINRDDYIQS RHTLFLNKLKFPITNLWNKSFYSKIFVDTFSSDILEEVNIIFICVLLNVKRDIISDFLMKIFYNDKVITLRDSQVLLLNK SLPLSLVEIEDSLKMLDRNMRDVKNFNFGERSLRLIKNFYFDILFNF >Mature_286_residues SGVKVYYPENFNALVSLFKEDSNSYIVYNEIDFHKNAAIFMKNDISDNFFIINNFERFNKVSLKSNFLEMGPCVTYDAIL QFGERNIPRLFYEFISRLNDRIYLNSINIANGFYYKNTVFDLYPLLLSLDAQLEFKNILTKKTYTYNAYSINRDDYIQSR HTLFLNKLKFPITNLWNKSFYSKIFVDTFSSDILEEVNIIFICVLLNVKRDIISDFLMKIFYNDKVITLRDSQVLLLNKS LPLSLVEIEDSLKMLDRNMRDVKNFNFGERSLRLIKNFYFDILFNF
Specific function: Unknown
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34188; Mature: 34057
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVKVYYPENFNALVSLFKEDSNSYIVYNEIDFHKNAAIFMKNDISDNFFIINNFERFN CCCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECHHHHC KVSLKSNFLEMGPCVTYDAILQFGERNIPRLFYEFISRLNDRIYLNSINIANGFYYKNTV CHHHHHCHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEHHHH FDLYPLLLSLDAQLEFKNILTKKTYTYNAYSINRDDYIQSRHTLFLNKLKFPITNLWNKS HHHHHHHHHCCCCCHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH FYSKIFVDTFSSDILEEVNIIFICVLLNVKRDIISDFLMKIFYNDKVITLRDSQVLLLNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEC SLPLSLVEIEDSLKMLDRNMRDVKNFNFGERSLRLIKNFYFDILFNF CCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECC >Mature Secondary Structure SGVKVYYPENFNALVSLFKEDSNSYIVYNEIDFHKNAAIFMKNDISDNFFIINNFERFN CCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECHHHHC KVSLKSNFLEMGPCVTYDAILQFGERNIPRLFYEFISRLNDRIYLNSINIANGFYYKNTV CHHHHHCHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEHHHH FDLYPLLLSLDAQLEFKNILTKKTYTYNAYSINRDDYIQSRHTLFLNKLKFPITNLWNKS HHHHHHHHHCCCCCHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH FYSKIFVDTFSSDILEEVNIIFICVLLNVKRDIISDFLMKIFYNDKVITLRDSQVLLLNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEC SLPLSLVEIEDSLKMLDRNMRDVKNFNFGERSLRLIKNFYFDILFNF CCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA