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The map label for this gene is rpmD [H]

Identifier: 187918362

GI number: 187918362

Start: 509999

End: 510310

Strand: Direct

Name: rpmD [H]

Synonym: BH0496

Alternate gene names: 187918362

Gene position: 509999-510310 (Clockwise)

Preceding gene: 187918361

Following gene: 187918363

Centisome position: 55.3

GC content: 29.81

Gene sequence:

>312_bases
ATGATTAAGAGAAAATTACGACTTCAGCTTAAAAAGATTAGATTTAAAGCATCAAGATCTAGAGCTAAGAATAGAGCTTT
TATTCAGAAGATGGCAATAAATAGAGAAATTCTTGCTAAGAGTGACATTAAGGTCGAAGTTGAGCTTAAGAGAAGTCTTA
TTGGAAAATTAGATAGTAAGGTTAAGACATTGAAAGCTTTGGGTCTTAAGAGAATAGGAGATAGAAAAATTCATGTTTTA
AATAAGTCTCTTCAAGGGATGCTTAATAGTGTAATTAGTATGGTTTTATTAAGTGAGGTAAAAAATGGTTAA

Upstream 100 bases:

>100_bases
TGTGGTAAAGGCGACTTTTAAAGCATTTGACTTAGTTTTGGATGCTAGAAAGGTAGCAGCGATAAGAGGTAAAACTTTAA
GGACTTTATGGAGTTAGTTT

Downstream 100 bases:

>100_bases
GCTAAGGAGACCTTCAGGGGCTAATAAGTCTCGAAAAATTGTTGGTAGGGGTCCAGGTTCTGGTCTTGGAAAAACCTCTG
GTAGAGGACAAAAGGGACAA

Product: 50S ribosomal protein L30

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MIKRKLRLQLKKIRFKASRSRAKNRAFIQKMAINREILAKSDIKVEVELKRSLIGKLDSKVKTLKALGLKRIGDRKIHVL
NKSLQGMLNSVISMVLLSEVKNG

Sequences:

>Translated_103_residues
MIKRKLRLQLKKIRFKASRSRAKNRAFIQKMAINREILAKSDIKVEVELKRSLIGKLDSKVKTLKALGLKRIGDRKIHVL
NKSLQGMLNSVISMVLLSEVKNG
>Mature_103_residues
MIKRKLRLQLKKIRFKASRSRAKNRAFIQKMAINREILAKSDIKVEVELKRSLIGKLDSKVKTLKALGLKRIGDRKIHVL
NKSLQGMLNSVISMVLLSEVKNG

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005996
- InterPro:   IPR016082 [H]

Pfam domain/function: PF00327 Ribosomal_L30 [H]

EC number: NA

Molecular weight: Translated: 11780; Mature: 11780

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRKLRLQLKKIRFKASRSRAKNRAFIQKMAINREILAKSDIKVEVELKRSLIGKLDSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
VKTLKALGLKRIGDRKIHVLNKSLQGMLNSVISMVLLSEVKNG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKRKLRLQLKKIRFKASRSRAKNRAFIQKMAINREILAKSDIKVEVELKRSLIGKLDSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
VKTLKALGLKRIGDRKIHVLNKSLQGMLNSVISMVLLSEVKNG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA