Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918332
Identifier: 187918332
GI number: 187918332
Start: 491849
End: 492559
Strand: Direct
Name: 187918332
Synonym: BH0465
Alternate gene names: NA
Gene position: 491849-492559 (Clockwise)
Preceding gene: 187918331
Following gene: 187918333
Centisome position: 53.33
GC content: 31.08
Gene sequence:
>711_bases ATGAGAAATTTGATTATCTGTTTAGTTTATATTACTTTTTTAAGTGGTTATGCACAAGATCAAAAGAGTTTTGATAAATC TGAAAAGTTGGCTGAGAAGTTAAAAACTGAAGATGGTACGCAGAAAAAGGGTGAATTTACTTTTAGAGCGGATTTTTCCT ATGGTATTATGTCACCTCTTTATAGGAGAATTATTTTAAAGGGAAATCCTGAGGTTATTTCTTCTGATTTTAAGCTTAGG GCTGATGAGATTGAAATTTATGGAGAAGGGAGTGCTTATATTGAGGCCCGTGGCAATGTTTATTATGAAGATTATGTTAA TAAAATGAATGTTAAGTCACAATTCTTATTTGTTAATAGGAAATTAGATAGTTTTTATCTTCAAAAAGGTGTTGAGCTTG AAGATTTGGAAAATGAACTTGTTGTTAAGGCTGAGAGAATTGAAGGTAGTCGTAAGACAAGTGTTTATATTATGCAGTAT TCTGTTAAGATATATAAAGGTGATATTTTTGCACGAGCTGAGAATGGAATTTATAATAAGGAAGAAAAAGAAATTGTTCT TGAAGGTGTTCCGGTGATTTATCAGGATGATAATTATTATTCTGCTTCAAGGATAGTTTTAAATACAGAAACCAAAAAAT ATAATCTTGAGGGTGATGTTGAAGGTAAATTTACTCAAGTGGAGGGAGATGTTCCCCAACAGAAAAAATAG
Upstream 100 bases:
>100_bases TTATTAGATTTGATGAGAGTAATATAACTGGAAAAGGATTTTCATATTTTTTAAAGAATAATAATTTTTATTTTTATTCT GGTATTGAAGGACTTGTAAA
Downstream 100 bases:
>100_bases AATAAAATCGATTAAAGAAAAGCTTAGCCTTGGTACTGTTACTGATATTGTTCTAAAGGCAGATAACATTGTTAAGAAAT ATGGAGAAAAATTAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRNLIICLVYITFLSGYAQDQKSFDKSEKLAEKLKTEDGTQKKGEFTFRADFSYGIMSPLYRRIILKGNPEVISSDFKLR ADEIEIYGEGSAYIEARGNVYYEDYVNKMNVKSQFLFVNRKLDSFYLQKGVELEDLENELVVKAERIEGSRKTSVYIMQY SVKIYKGDIFARAENGIYNKEEKEIVLEGVPVIYQDDNYYSASRIVLNTETKKYNLEGDVEGKFTQVEGDVPQQKK
Sequences:
>Translated_236_residues MRNLIICLVYITFLSGYAQDQKSFDKSEKLAEKLKTEDGTQKKGEFTFRADFSYGIMSPLYRRIILKGNPEVISSDFKLR ADEIEIYGEGSAYIEARGNVYYEDYVNKMNVKSQFLFVNRKLDSFYLQKGVELEDLENELVVKAERIEGSRKTSVYIMQY SVKIYKGDIFARAENGIYNKEEKEIVLEGVPVIYQDDNYYSASRIVLNTETKKYNLEGDVEGKFTQVEGDVPQQKK >Mature_236_residues MRNLIICLVYITFLSGYAQDQKSFDKSEKLAEKLKTEDGTQKKGEFTFRADFSYGIMSPLYRRIILKGNPEVISSDFKLR ADEIEIYGEGSAYIEARGNVYYEDYVNKMNVKSQFLFVNRKLDSFYLQKGVELEDLENELVVKAERIEGSRKTSVYIMQY SVKIYKGDIFARAENGIYNKEEKEIVLEGVPVIYQDDNYYSASRIVLNTETKKYNLEGDVEGKFTQVEGDVPQQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27358; Mature: 27358
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLIICLVYITFLSGYAQDQKSFDKSEKLAEKLKTEDGTQKKGEFTFRADFSYGIMSPL CCHHEEHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHH YRRIILKGNPEVISSDFKLRADEIEIYGEGSAYIEARGNVYYEDYVNKMNVKSQFLFVNR HHEEEECCCCCEECCCCEEEEEEEEEEECCCEEEEECCCEEEHHHHHHCCCCEEEEEEEC KLDSFYLQKGVELEDLENELVVKAERIEGSRKTSVYIMQYSVKIYKGDIFARAENGIYNK CHHHHHHHCCCCHHHCCCHHEEEEECCCCCCCEEEEEEEEEEEEEECEEEEEECCCCCCC EEKEIVLEGVPVIYQDDNYYSASRIVLNTETKKYNLEGDVEGKFTQVEGDVPQQKK CCCEEEEECCCEEEECCCEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MRNLIICLVYITFLSGYAQDQKSFDKSEKLAEKLKTEDGTQKKGEFTFRADFSYGIMSPL CCHHEEHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHH YRRIILKGNPEVISSDFKLRADEIEIYGEGSAYIEARGNVYYEDYVNKMNVKSQFLFVNR HHEEEECCCCCEECCCCEEEEEEEEEEECCCEEEEECCCEEEHHHHHHCCCCEEEEEEEC KLDSFYLQKGVELEDLENELVVKAERIEGSRKTSVYIMQYSVKIYKGDIFARAENGIYNK CHHHHHHHCCCCHHHCCCHHEEEEECCCCCCCEEEEEEEEEEEEEECEEEEEECCCCCCC EEKEIVLEGVPVIYQDDNYYSASRIVLNTETKKYNLEGDVEGKFTQVEGDVPQQKK CCCEEEEECCCEEEECCCEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA