The gene/protein map for NC_010673 is currently unavailable.
Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918281

Identifier: 187918281

GI number: 187918281

Start: 429914

End: 431122

Strand: Direct

Name: 187918281

Synonym: BH0416

Alternate gene names: NA

Gene position: 429914-431122 (Clockwise)

Preceding gene: 187918280

Following gene: 187918282

Centisome position: 46.61

GC content: 30.19

Gene sequence:

>1209_bases
TTGGACATCAAAAAAGAGAACACTGAGGATTGCTTTTCACATGTCAGCACTCTTGACGTAGACCATTACAAAATATACAT
ACTAGGAACAGCGCATGTATCAAAAAAGAGCTCACAAGATACAGCTACTTTAATTGAGACATTAAAGCCAAACTTTATTG
CCGTTGAACTTGATGAGGCTCGTTACCACGCAATTCTAAAAACAGATGAAAATGAAAAATGGCGCAATTTAGACATATAT
AAAGTAATAAAACAAGGAAAAGCATTTTTACTAATAGTACAGATCATTTTAAGTAATTTTCAAAAAAAATTAGCAAAAGA
ACAAGGGATTAATCCTGGCGAAGAGATGAAAACAGCCATTTTAAAAGCTAAAGAGCACAATATACCGTTAATACTTGTAG
ACAGAAAAGTTGAGACAACCCTAAAGAGGGCCTGGAATTGTGTCCCAATTTTTGAAAAAGTCAAAATAATATCAAGCTTG
TTTTCATTCTCAGACGTAAAAGTCACACAAGATGAAATTGAAAAACTCAAAGAACAAGATGTTCTATCAAATATGATGGG
AGAACTTGCAAAAGAAATTCCTACTGTAAAAAAAGTTTTAATTGATGAGAGAGATGAATTTATAGCAAGCAAGATACTTG
AAGGCTCAGGAACAATTCTTGCTGTTGTTGGTGCTGGTCATGTAAAGGGAATAATAGCAAATTTAAAAGAAATTAAAGAA
AATAAAAAAATTATTAACATCAATGAGCTAAATACCATACCTAAGAATACTTTTTCCATAAGCAAATTAATATCTTACTT
TATAGCAATCTCAATTGTTATACTAATGGCAAGCTCATTCTACTTTAAAGGCTTTGATTTAGCTTACAAAAATTTAAAGT
TTTGGATAATATGTAATTCTTTATTTGCAGGTCTTGCTGCTCTTTTACTAAGAGCCAATATTATAACGATACTAACAGCA
TCAATTGGAGCTCCAATATTTTCCTTAATTCCATTTATTGGAACGGGTATGGTTGCAGGTCTTGTTGAAGCTTATATAAA
TAAACCAAAAATAAAAGATTTTGAAAATCTACAAGAAGATTTGAATAACATAAAAGGATATTTTAAGAACAAAGTTACAA
AAATCTTATTAATAGTATTTTTCGTAAACATTGGGTCTGCAATTGGAACAATTGTTGGATTTCAATTCTTGTTAAATATT
TTTAGCTAA

Upstream 100 bases:

>100_bases
AAGAAAATAATGTAGACTATATAGTTTCAATAAGTCATGTGGTAAAATTATTAAAAGCCATCCTTATTGATGGTTAAATT
TTTAAAAACAAGGATAACCT

Downstream 100 bases:

>100_bases
ATACCAAAAAGAAAAATAAAAATATACAGGAGTCACATTATGAAGCTTGTTTTTTTAGGGCCCCCGGGTTCTGGAAAAGG
TACAATTGCCAAGATCCTCT

Product: pheromone shutdown protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDIKKENTEDCFSHVSTLDVDHYKIYILGTAHVSKKSSQDTATLIETLKPNFIAVELDEARYHAILKTDENEKWRNLDIY
KVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAILKAKEHNIPLILVDRKVETTLKRAWNCVPIFEKVKIISSL
FSFSDVKVTQDEIEKLKEQDVLSNMMGELAKEIPTVKKVLIDERDEFIASKILEGSGTILAVVGAGHVKGIIANLKEIKE
NKKIININELNTIPKNTFSISKLISYFIAISIVILMASSFYFKGFDLAYKNLKFWIICNSLFAGLAALLLRANIITILTA
SIGAPIFSLIPFIGTGMVAGLVEAYINKPKIKDFENLQEDLNNIKGYFKNKVTKILLIVFFVNIGSAIGTIVGFQFLLNI
FS

Sequences:

>Translated_402_residues
MDIKKENTEDCFSHVSTLDVDHYKIYILGTAHVSKKSSQDTATLIETLKPNFIAVELDEARYHAILKTDENEKWRNLDIY
KVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAILKAKEHNIPLILVDRKVETTLKRAWNCVPIFEKVKIISSL
FSFSDVKVTQDEIEKLKEQDVLSNMMGELAKEIPTVKKVLIDERDEFIASKILEGSGTILAVVGAGHVKGIIANLKEIKE
NKKIININELNTIPKNTFSISKLISYFIAISIVILMASSFYFKGFDLAYKNLKFWIICNSLFAGLAALLLRANIITILTA
SIGAPIFSLIPFIGTGMVAGLVEAYINKPKIKDFENLQEDLNNIKGYFKNKVTKILLIVFFVNIGSAIGTIVGFQFLLNI
FS
>Mature_402_residues
MDIKKENTEDCFSHVSTLDVDHYKIYILGTAHVSKKSSQDTATLIETLKPNFIAVELDEARYHAILKTDENEKWRNLDIY
KVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAILKAKEHNIPLILVDRKVETTLKRAWNCVPIFEKVKIISSL
FSFSDVKVTQDEIEKLKEQDVLSNMMGELAKEIPTVKKVLIDERDEFIASKILEGSGTILAVVGAGHVKGIIANLKEIKE
NKKIININELNTIPKNTFSISKLISYFIAISIVILMASSFYFKGFDLAYKNLKFWIICNSLFAGLAALLLRANIITILTA
SIGAPIFSLIPFIGTGMVAGLVEAYINKPKIKDFENLQEDLNNIKGYFKNKVTKILLIVFFVNIGSAIGTIVGFQFLLNI
FS

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33342278, Length=288, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71988206, Length=237, Percent_Identity=28.2700421940928, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71988217, Length=237, Percent_Identity=28.2700421940928, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646455, Length=203, Percent_Identity=31.5270935960591, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI21357445, Length=203, Percent_Identity=31.5270935960591, Blast_Score=95, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 45152; Mature: 45152

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKKENTEDCFSHVSTLDVDHYKIYILGTAHVSKKSSQDTATLIETLKPNFIAVELDEA
CCCCCCCHHHHHHHHHHCCCCCEEEEEEEECHHCCCCCCHHHHHHHHCCCCEEEEEECCC
RYHAILKTDENEKWRNLDIYKVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAI
CEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LKAKEHNIPLILVDRKVETTLKRAWNCVPIFEKVKIISSLFSFSDVKVTQDEIEKLKEQD
HHHHCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHH
VLSNMMGELAKEIPTVKKVLIDERDEFIASKILEGSGTILAVVGAGHVKGIIANLKEIKE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
NKKIININELNTIPKNTFSISKLISYFIAISIVILMASSFYFKGFDLAYKNLKFWIICNS
CCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEHHH
LFAGLAALLLRANIITILTASIGAPIFSLIPFIGTGMVAGLVEAYINKPKIKDFENLQED
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LNNIKGYFKNKVTKILLIVFFVNIGSAIGTIVGFQFLLNIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDIKKENTEDCFSHVSTLDVDHYKIYILGTAHVSKKSSQDTATLIETLKPNFIAVELDEA
CCCCCCCHHHHHHHHHHCCCCCEEEEEEEECHHCCCCCCHHHHHHHHCCCCEEEEEECCC
RYHAILKTDENEKWRNLDIYKVIKQGKAFLLIVQIILSNFQKKLAKEQGINPGEEMKTAI
CEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LKAKEHNIPLILVDRKVETTLKRAWNCVPIFEKVKIISSLFSFSDVKVTQDEIEKLKEQD
HHHHCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHH
VLSNMMGELAKEIPTVKKVLIDERDEFIASKILEGSGTILAVVGAGHVKGIIANLKEIKE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
NKKIININELNTIPKNTFSISKLISYFIAISIVILMASSFYFKGFDLAYKNLKFWIICNS
CCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEHHH
LFAGLAALLLRANIITILTASIGAPIFSLIPFIGTGMVAGLVEAYINKPKIKDFENLQED
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LNNIKGYFKNKVTKILLIVFFVNIGSAIGTIVGFQFLLNIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]