Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918234
Identifier: 187918234
GI number: 187918234
Start: 377923
End: 378186
Strand: Direct
Name: 187918234
Synonym: BH0367
Alternate gene names: NA
Gene position: 377923-378186 (Clockwise)
Preceding gene: 187918233
Following gene: 187918240
Centisome position: 40.98
GC content: 25.0
Gene sequence:
>264_bases ATGAATAAAGAAACAATAAAAACATCGGAACATATTTTAGAATGCTTTGGGGGCATTGCAAACATTAAACAAGTAAACAA AGATTTAACTAGAATAAAAATCTTAGTTGACAGCAACTCTTTAGTTAAAAGAGAAAATCTAACAGACGATCGAAATATAA TAGGAGCAATTAAATCAAATGAATTTACAGAAATTGTAATGAATTTTGAAATAATTGACGATGTTTATAGCAATATCATA TATATGATGAATAAACAAACATAA
Upstream 100 bases:
>100_bases CCTGGTGTTATTAGTATGCACTCACCATTTGAAATCACTTCTAAATTTGACATATATACTTCTTATATGGCTTATAAAGC GTTCTTTGAAGGATAACTAA
Downstream 100 bases:
>100_bases GTAGGACCCGTTTGGGTCCTAAAATTTAAAATTTCTTATATAATCAACAACAGCTTCAGGTTTTAATTCTTTATTTAAGA TTTTATACACTATATTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative PTS system EIIB component [H]
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MNKETIKTSEHILECFGGIANIKQVNKDLTRIKILVDSNSLVKRENLTDDRNIIGAIKSNEFTEIVMNFEIIDDVYSNII YMMNKQT
Sequences:
>Translated_87_residues MNKETIKTSEHILECFGGIANIKQVNKDLTRIKILVDSNSLVKRENLTDDRNIIGAIKSNEFTEIVMNFEIIDDVYSNII YMMNKQT >Mature_87_residues MNKETIKTSEHILECFGGIANIKQVNKDLTRIKILVDSNSLVKRENLTDDRNIIGAIKSNEFTEIVMNFEIIDDVYSNII YMMNKQT
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1264
COG function: function code G; Phosphotransferase system IIB components
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR001996 [H]
Pfam domain/function: PF00367 PTS_EIIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 10038; Mature: 10038
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS51098 PTS_EIIB_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKETIKTSEHILECFGGIANIKQVNKDLTRIKILVDSNSLVKRENLTDDRNIIGAIKSN CCCCHHHHHHHHHHHHCCHHHHHHHCCCHHEEEEEECCCCEEECCCCCCCCCEEEECCCC EFTEIVMNFEIIDDVYSNIIYMMNKQT CHHHHHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure MNKETIKTSEHILECFGGIANIKQVNKDLTRIKILVDSNSLVKRENLTDDRNIIGAIKSN CCCCHHHHHHHHHHHHCCHHHHHHHCCCHHEEEEEECCCCEEECCCCCCCCCEEEECCCC EFTEIVMNFEIIDDVYSNIIYMMNKQT CHHHHHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]