Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918135
Identifier: 187918135
GI number: 187918135
Start: 276511
End: 277893
Strand: Direct
Name: 187918135
Synonym: BH0261
Alternate gene names: NA
Gene position: 276511-277893 (Clockwise)
Preceding gene: 187918130
Following gene: 187918137
Centisome position: 29.98
GC content: 27.19
Gene sequence:
>1383_bases GTGTTACCATTATTTATAATACTGTCCTCAATTGCAATATCTGCTGTGGTATTTTTATTCTTTAAAATTGCAATATCAAA TAGCAAAACAAGAAAAAAAGGTAGACATAACAAAACATTAAACAAAACAAAAAAAATAACAGAACAAGCTGCAAATATGT TAAAAACAAACCCAAATGACATAAGTGCTTTGCAAACTCTAAACGATTATTATTATTCCAATAAAGACTTTGAAAACGGA ATTAAATATGCAAGAAAATTATGCCAACTTGCAGAAGAAAATCCTATAAATCAAGAAATAGACTCTTTTAAGGCTTTCTT AAGTTATGGTTTTTATAATCTTGAGAGAAATTTTAATGCAGAAGCATTAGAATTTCTTAAAAAAGCATATGTCATAAAAA AAAATGATATGGATGTGAATTACTATCTTGGAATAGCTTTCCTACGAAATGCACATTACAAAGAAGCACTCCATTATCTT ACAAAGATATATAAATGTGATAAAAATAATAAAGATGCTTTAAAATACATAGGAATAACTCTCTTTTATACAGGCAACTA TACTAAAGCTGTTGGAATATTTAGTGGTATAAGCAAATATATACAAAATGATATAAATGCTCTATTAGCATATGCCCAAT CCCTATCTCAATTAAATCAAGACCATCTTGCACTTGATATTGCAAACAAAATCAAAAATAAAGATGGAATGATATATGAA GCTCTCCTAATTGAATCTGATATTAATTCAAAAAATAACAACTTAGCAAAACTAGAAGATAACGTTAGAGAAATGATGAA AGTCAAACCTGATTTACCTACAAAAATATTTCTTAAACTCTTTTACAAACTAGGAGAACTATACATAGAATGTGAGAACT ACAAAAAAGCAACCGAGGCGTTTACTCAAGTTGAAAGAATTGACCCACACTATCAAAAAATAGCTGAAAAACTAGAATTT AGTAAAAGACTAAATGAAAACTTAGCATTAAGAATATATCTTAAAAGTCCAAAAGAAAAGTTTGATAATCTAGCCAGTGC AATTATCCTTAAAATCTATAAAAATAAGTTCCAAGTAAGAGATAAAAAGATAAATGAAATAACCTCACAATTTATAGACA TGAATTTCCAACTATCAAATAATCAATGGGAAGAAAATCTAATAGTCCGATTTGTCAGAACAGAACAAAAAAATTTTGGT GAATTATTTTTAAAAGACTTTATTTCAAAAACTAAAGAGAGCAAATTAAAAGGACTCTGTATTGCACCAGCCATATTTTC TGAGAAAGCCAAACAAATCATTGAAGGTAGGTTAATTGACCTTGTAGAAGGAAAAAAATTAATACAAATACTTAAAACAT TGGATATATCAAAGTATATATAG
Upstream 100 bases:
>100_bases CTTGTAAGTAAGCTTTTAGGTAAAAGAAAAAATACCCAAAGGCTATGCATTACTTGTTTTATATGATATTACTAAATATG ATTTTTTAGGAGAAGTTAGG
Downstream 100 bases:
>100_bases CCACTATCTGAGGTATTTCATAGGATTCCCTGTTTTTCCATCTTTAAAAATGGTGAAATGTAAATGATTGCCCGTACTAT ACCCTGTACTTCCCATACGT
Product: tetratricopeptide repeat family protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Restriction Endonuclease
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MLPLFIILSSIAISAVVFLFFKIAISNSKTRKKGRHNKTLNKTKKITEQAANMLKTNPNDISALQTLNDYYYSNKDFENG IKYARKLCQLAEENPINQEIDSFKAFLSYGFYNLERNFNAEALEFLKKAYVIKKNDMDVNYYLGIAFLRNAHYKEALHYL TKIYKCDKNNKDALKYIGITLFYTGNYTKAVGIFSGISKYIQNDINALLAYAQSLSQLNQDHLALDIANKIKNKDGMIYE ALLIESDINSKNNNLAKLEDNVREMMKVKPDLPTKIFLKLFYKLGELYIECENYKKATEAFTQVERIDPHYQKIAEKLEF SKRLNENLALRIYLKSPKEKFDNLASAIILKIYKNKFQVRDKKINEITSQFIDMNFQLSNNQWEENLIVRFVRTEQKNFG ELFLKDFISKTKESKLKGLCIAPAIFSEKAKQIIEGRLIDLVEGKKLIQILKTLDISKYI
Sequences:
>Translated_460_residues MLPLFIILSSIAISAVVFLFFKIAISNSKTRKKGRHNKTLNKTKKITEQAANMLKTNPNDISALQTLNDYYYSNKDFENG IKYARKLCQLAEENPINQEIDSFKAFLSYGFYNLERNFNAEALEFLKKAYVIKKNDMDVNYYLGIAFLRNAHYKEALHYL TKIYKCDKNNKDALKYIGITLFYTGNYTKAVGIFSGISKYIQNDINALLAYAQSLSQLNQDHLALDIANKIKNKDGMIYE ALLIESDINSKNNNLAKLEDNVREMMKVKPDLPTKIFLKLFYKLGELYIECENYKKATEAFTQVERIDPHYQKIAEKLEF SKRLNENLALRIYLKSPKEKFDNLASAIILKIYKNKFQVRDKKINEITSQFIDMNFQLSNNQWEENLIVRFVRTEQKNFG ELFLKDFISKTKESKLKGLCIAPAIFSEKAKQIIEGRLIDLVEGKKLIQILKTLDISKYI >Mature_460_residues MLPLFIILSSIAISAVVFLFFKIAISNSKTRKKGRHNKTLNKTKKITEQAANMLKTNPNDISALQTLNDYYYSNKDFENG IKYARKLCQLAEENPINQEIDSFKAFLSYGFYNLERNFNAEALEFLKKAYVIKKNDMDVNYYLGIAFLRNAHYKEALHYL TKIYKCDKNNKDALKYIGITLFYTGNYTKAVGIFSGISKYIQNDINALLAYAQSLSQLNQDHLALDIANKIKNKDGMIYE ALLIESDINSKNNNLAKLEDNVREMMKVKPDLPTKIFLKLFYKLGELYIECENYKKATEAFTQVERIDPHYQKIAEKLEF SKRLNENLALRIYLKSPKEKFDNLASAIILKIYKNKFQVRDKKINEITSQFIDMNFQLSNNQWEENLIVRFVRTEQKNFG ELFLKDFISKTKESKLKGLCIAPAIFSEKAKQIIEGRLIDLVEGKKLIQILKTLDISKYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53475; Mature: 53475
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLFIILSSIAISAVVFLFFKIAISNSKTRKKGRHNKTLNKTKKITEQAANMLKTNPND CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCH ISALQTLNDYYYSNKDFENGIKYARKLCQLAEENPINQEIDSFKAFLSYGFYNLERNFNA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH EALEFLKKAYVIKKNDMDVNYYLGIAFLRNAHYKEALHYLTKIYKCDKNNKDALKYIGIT HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEE LFYTGNYTKAVGIFSGISKYIQNDINALLAYAQSLSQLNQDHLALDIANKIKNKDGMIYE EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEE ALLIESDINSKNNNLAKLEDNVREMMKVKPDLPTKIFLKLFYKLGELYIECENYKKATEA HHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHH FTQVERIDPHYQKIAEKLEFSKRLNENLALRIYLKSPKEKFDNLASAIILKIYKNKFQVR HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH DKKINEITSQFIDMNFQLSNNQWEENLIVRFVRTEQKNFGELFLKDFISKTKESKLKGLC HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE IAPAIFSEKAKQIIEGRLIDLVEGKKLIQILKTLDISKYI ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPLFIILSSIAISAVVFLFFKIAISNSKTRKKGRHNKTLNKTKKITEQAANMLKTNPND CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCH ISALQTLNDYYYSNKDFENGIKYARKLCQLAEENPINQEIDSFKAFLSYGFYNLERNFNA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH EALEFLKKAYVIKKNDMDVNYYLGIAFLRNAHYKEALHYLTKIYKCDKNNKDALKYIGIT HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEE LFYTGNYTKAVGIFSGISKYIQNDINALLAYAQSLSQLNQDHLALDIANKIKNKDGMIYE EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEE ALLIESDINSKNNNLAKLEDNVREMMKVKPDLPTKIFLKLFYKLGELYIECENYKKATEA HHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHH FTQVERIDPHYQKIAEKLEFSKRLNENLALRIYLKSPKEKFDNLASAIILKIYKNKFQVR HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH DKKINEITSQFIDMNFQLSNNQWEENLIVRFVRTEQKNFGELFLKDFISKTKESKLKGLC HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE IAPAIFSEKAKQIIEGRLIDLVEGKKLIQILKTLDISKYI ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA