Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is leuS
Identifier: 187918124
GI number: 187918124
Start: 258405
End: 260933
Strand: Direct
Name: leuS
Synonym: BH0251
Alternate gene names: 187918124
Gene position: 258405-260933 (Clockwise)
Preceding gene: 187918123
Following gene: 187918125
Centisome position: 28.02
GC content: 31.36
Gene sequence:
>2529_bases ATGTCTGAATATAATTTCACTAAGATAGAAAAAAAATGGCAGGATTATTGGGATAAACACAAAACATACAAAGTTAATGA AGATCCAAATATTCCTAAAGAAAAACGAATTTACATTCTTGATATGTTTCCCTACCCTTCAGCTAATGGACTCCATGTTG GGCATCCTGAAGGTTATACAGCAACTGACATATTAACAAGATATAAACTCTTAAATGGATTTAATGTACTTCACCCAATA GGATTTGATAGTTTTGGATTGCCTGCAGAAAATTACGCAATACAAACAGGAGAGCATCCAAAAAAAATAACAGAAAAAAA TATTAAAAAATTTAAAGAACAAATTAAAGCATTAGGATTTGCCTATGATTGGGATAGAGAAATCAGAACCCACGATGAAA ATTACTACAAATGGACACAATGGATTTTCCTAAAATTATATAAAAAAGGTTTAGCTTACACAAAAGAAATGCCCGTATGG TACTGCCCTGACCTTGGAACAGTACTCTCAAATGAAGAAGTGATACAAACACCTGATGGACCTAGATCTGAGCGGGGATT TCACAAAGTAAAAAGAAAACCTTTAAGACAATGGATACTCAAAATCACAGAATATGCAGAAAGACTAATTAAAGATCTCG AAGAGATAGATTGGCCTGAATCTGTTAAAGAAATGCAAAAAAATTGGATTGGAAAGTCAACAGGCGCCGAGATCGAATTT TCAGTAAAGGCAAGTAAAGAAAAGATAAAAGTGTTTACAACAAGACCAGACACAATTTTTGGAGTAACATATTTAGTGCT TGCACCAGAGCATAGCATAGTAGATAAAATTACAAAAGATGAATTTAAACCTATGATCGTAGAGTATAGAGAAAGAGAAA CTCTTAAAAGCGATCTTGAAAGAACTTCTCTTGAAAAAGATAAAACGGGAGTATTTACAGGCGCATATGCTATTAATCCA ATAACTGGAGAAGAAATACCAATCTGGATAGGCAGCTATATACTTGGAACCTACGGCACTGGAGCTGTAATGAGTGTCCC AGCACATGATGCTAGAGATTTTGAATTTGCAAAAAAATATAATCTACCAATCAAACAAGTAGTCTCTCAAACAGGAAACA ATGAAATACTAACACAACCATTTACTGAAAATGGCATTTCAATTAATACCCCTGAAGAATTTAATAATCTTAAAACTGAT GAAATCAAAGAAAGAGTAATTAAATGGCTTACTGAAAACAAGAAGGGTCAAAAAAAGGTTAATTATAAACTTAGAGATTG GATTTTTTCAAGACAAAGATATTGGGGAGAACCCATTCCTATTATACTTGATGATGATTTAAATGAAATACCACTAGAAG AAGATGAATTACCTCTAAGGCTTCCAGAAATAGAAAATTATAAACCATCAGGTACAGGCGAATCTCCTCTATCAAGAATC CAAGATTGGGTCAATATTAAACGTAATGGAAAAACATATAAAAGAGAAACGAACACAATGCCTCAATGGGCAGGTTCCTG CTGGTATTACATACGTTACCTTGATCCAAATAATGACAATGAATTTGCAAGTAAAGAAAAAATTAATTACTGGATGCCAG TTGATCTTTATATTGGAGGTGCTGAGCACTCGGTATTACACTTACTATATGCAAGATTTTGGCATAAAGTTCTTTATGAT TTAGGATATGTCAATACAAAAGAACCCTTTAAAAAACTAATAAATCAGGGAATGATAACATCATTTGCATATCAAGACGA AAATGGTATTTTAATTCCCAATGACGAGGTTGAAAAGAAAGATAATAAGTTTTTTTCCAAAAAAAATAATAAGGAACTCA AACAAATAGTTGCAAAAATGTCAAAATCACTCAAAAATATAATAAATCCAGACGATATTATTAAAGAATACGGTGCAGAT TCAATGAGAATCTACGAAATGTTCATGGGCCCTTTAACTGATTCAAAACCTTGGAATACACAAGGACTAATTGGAATTTT TAGATTCTTAAACAAAATATGGACTATTAAGAACAAAGAACTAACAAAAGAATCAGCATCAAAAGAAATAATATCTGAAC TTCACAAAACAATCAAAAAAGTAACAGAAGACATAGAAAATTTAAATTTTAATACTGCAATTTCATCATTGATGATATTT ATAAATGAACTTTTAAAACATGATAAAAATTACTTAGAAATCTTCAAGCCTCTAACCATTATCCTTTCACCATTTGCGCC TCATCTAGGAGAAGAATTATGGGAATATATGGGAGAAACCCCCAGCATATTCAAAAGTGCAAAGTGGCCAGAATACGATC CAAATCTAATTATTGATAATACAAGAGAGATTGTACTGCAAATTAATGGCAAAATAAAAGATAAAATTATCTTAAACAAA GGCACAAATGAGGAAGCTCTTAAAAGTATTGCACTTAAAAATCACAAAATCATGCAAAATATACAAAATAAACAAATAAT AAAGATCATTACGGTCAAAGATAAGCTTATAAATATAGTAACAAGATAA
Upstream 100 bases:
>100_bases AAGTTAATAACAATATAAATATTAATTTACTTTTCAATGAAGTAACTATGAATATAAAAATGCTATTATAAACCTTAAAC AATTATTTGCTGAGGGACAG
Downstream 100 bases:
>100_bases CGAGGCAAAAATGGATTTGGAAACCTTAAGCATTAAATACAGAGTTTTTATATTAATAATATTCACATTAATAACAATTT TTTTAGGATTTTTCTTAAAA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS
Number of amino acids: Translated: 842; Mature: 841
Protein sequence:
>842_residues MSEYNFTKIEKKWQDYWDKHKTYKVNEDPNIPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPI GFDSFGLPAENYAIQTGEHPKKITEKNIKKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLAYTKEMPVW YCPDLGTVLSNEEVIQTPDGPRSERGFHKVKRKPLRQWILKITEYAERLIKDLEEIDWPESVKEMQKNWIGKSTGAEIEF SVKASKEKIKVFTTRPDTIFGVTYLVLAPEHSIVDKITKDEFKPMIVEYRERETLKSDLERTSLEKDKTGVFTGAYAINP ITGEEIPIWIGSYILGTYGTGAVMSVPAHDARDFEFAKKYNLPIKQVVSQTGNNEILTQPFTENGISINTPEEFNNLKTD EIKERVIKWLTENKKGQKKVNYKLRDWIFSRQRYWGEPIPIILDDDLNEIPLEEDELPLRLPEIENYKPSGTGESPLSRI QDWVNIKRNGKTYKRETNTMPQWAGSCWYYIRYLDPNNDNEFASKEKINYWMPVDLYIGGAEHSVLHLLYARFWHKVLYD LGYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVEKKDNKFFSKKNNKELKQIVAKMSKSLKNIINPDDIIKEYGAD SMRIYEMFMGPLTDSKPWNTQGLIGIFRFLNKIWTIKNKELTKESASKEIISELHKTIKKVTEDIENLNFNTAISSLMIF INELLKHDKNYLEIFKPLTIILSPFAPHLGEELWEYMGETPSIFKSAKWPEYDPNLIIDNTREIVLQINGKIKDKIILNK GTNEEALKSIALKNHKIMQNIQNKQIIKIITVKDKLINIVTR
Sequences:
>Translated_842_residues MSEYNFTKIEKKWQDYWDKHKTYKVNEDPNIPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPI GFDSFGLPAENYAIQTGEHPKKITEKNIKKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLAYTKEMPVW YCPDLGTVLSNEEVIQTPDGPRSERGFHKVKRKPLRQWILKITEYAERLIKDLEEIDWPESVKEMQKNWIGKSTGAEIEF SVKASKEKIKVFTTRPDTIFGVTYLVLAPEHSIVDKITKDEFKPMIVEYRERETLKSDLERTSLEKDKTGVFTGAYAINP ITGEEIPIWIGSYILGTYGTGAVMSVPAHDARDFEFAKKYNLPIKQVVSQTGNNEILTQPFTENGISINTPEEFNNLKTD EIKERVIKWLTENKKGQKKVNYKLRDWIFSRQRYWGEPIPIILDDDLNEIPLEEDELPLRLPEIENYKPSGTGESPLSRI QDWVNIKRNGKTYKRETNTMPQWAGSCWYYIRYLDPNNDNEFASKEKINYWMPVDLYIGGAEHSVLHLLYARFWHKVLYD LGYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVEKKDNKFFSKKNNKELKQIVAKMSKSLKNIINPDDIIKEYGAD SMRIYEMFMGPLTDSKPWNTQGLIGIFRFLNKIWTIKNKELTKESASKEIISELHKTIKKVTEDIENLNFNTAISSLMIF INELLKHDKNYLEIFKPLTIILSPFAPHLGEELWEYMGETPSIFKSAKWPEYDPNLIIDNTREIVLQINGKIKDKIILNK GTNEEALKSIALKNHKIMQNIQNKQIIKIITVKDKLINIVTR >Mature_841_residues SEYNFTKIEKKWQDYWDKHKTYKVNEDPNIPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPIG FDSFGLPAENYAIQTGEHPKKITEKNIKKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLAYTKEMPVWY CPDLGTVLSNEEVIQTPDGPRSERGFHKVKRKPLRQWILKITEYAERLIKDLEEIDWPESVKEMQKNWIGKSTGAEIEFS VKASKEKIKVFTTRPDTIFGVTYLVLAPEHSIVDKITKDEFKPMIVEYRERETLKSDLERTSLEKDKTGVFTGAYAINPI TGEEIPIWIGSYILGTYGTGAVMSVPAHDARDFEFAKKYNLPIKQVVSQTGNNEILTQPFTENGISINTPEEFNNLKTDE IKERVIKWLTENKKGQKKVNYKLRDWIFSRQRYWGEPIPIILDDDLNEIPLEEDELPLRLPEIENYKPSGTGESPLSRIQ DWVNIKRNGKTYKRETNTMPQWAGSCWYYIRYLDPNNDNEFASKEKINYWMPVDLYIGGAEHSVLHLLYARFWHKVLYDL GYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVEKKDNKFFSKKNNKELKQIVAKMSKSLKNIINPDDIIKEYGADS MRIYEMFMGPLTDSKPWNTQGLIGIFRFLNKIWTIKNKELTKESASKEIISELHKTIKKVTEDIENLNFNTAISSLMIFI NELLKHDKNYLEIFKPLTIILSPFAPHLGEELWEYMGETPSIFKSAKWPEYDPNLIIDNTREIVLQINGKIKDKIILNKG TNEEALKSIALKNHKIMQNIQNKQIIKIITVKDKLINIVTR
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI7661872, Length=884, Percent_Identity=30.9954751131222, Blast_Score=437, Evalue=1e-122, Organism=Escherichia coli, GI1786861, Length=873, Percent_Identity=39.7479954180985, Blast_Score=610, Evalue=1e-175, Organism=Escherichia coli, GI1790708, Length=966, Percent_Identity=20.9109730848861, Blast_Score=103, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71997510, Length=830, Percent_Identity=30.3614457831325, Blast_Score=315, Evalue=6e-86, Organism=Caenorhabditis elegans, GI71997517, Length=781, Percent_Identity=30.729833546735, Blast_Score=315, Evalue=7e-86, Organism=Caenorhabditis elegans, GI212645227, Length=327, Percent_Identity=30.8868501529052, Blast_Score=145, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6323414, Length=813, Percent_Identity=37.3923739237392, Blast_Score=469, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321531, Length=512, Percent_Identity=21.6796875, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI21355409, Length=839, Percent_Identity=30.8700834326579, Blast_Score=374, Evalue=1e-103,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYL_BORHD (B2RZW1)
Other databases:
- EMBL: CP000048 - RefSeq: YP_001883687.1 - EnsemblBacteria: EBBORT00000006763 - GeneID: 6277013 - GenomeReviews: CP000048_GR - KEGG: bhr:BH0251 - GeneTree: EBGT00050000007023 - HOGENOM: HBG693845 - OMA: ERGNFPV - ProtClustDB: PRK00390 - BioCyc: BHER314723:BH0251-MONOMER - GO: GO:0005737 - HAMAP: MF_00049_B - InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11946:SF7 - PRINTS: PR00985 - TIGRFAMs: TIGR00396
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; SSF47323 tRNAsyn_1a_bind; SSF50677 ValRS_IleRS_edit
EC number: =6.1.1.4
Molecular weight: Translated: 98522; Mature: 98391
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 622-622
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYNFTKIEKKWQDYWDKHKTYKVNEDPNIPKEKRIYILDMFPYPSANGLHVGHPEGYT CCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCH ATDILTRYKLLNGFNVLHPIGFDSFGLPAENYAIQTGEHPKKITEKNIKKFKEQIKALGF HHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCC AYDWDREIRTHDENYYKWTQWIFLKLYKKGLAYTKEMPVWYCPDLGTVLSNEEVIQTPDG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCEEECCCC PRSERGFHKVKRKPLRQWILKITEYAERLIKDLEEIDWPESVKEMQKNWIGKSTGAEIEF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEE SVKASKEKIKVFTTRPDTIFGVTYLVLAPEHSIVDKITKDEFKPMIVEYRERETLKSDLE EEECCCCEEEEEECCCCHHHCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RTSLEKDKTGVFTGAYAINPITGEEIPIWIGSYILGTYGTGAVMSVPAHDARDFEFAKKY HHHCCCCCCCEEECCEEECCCCCCCCCEEHHHHHHHCCCCCCEEECCCCCCCCHHHHHHC NLPIKQVVSQTGNNEILTQPFTENGISINTPEEFNNLKTDEIKERVIKWLTENKKGQKKV CCCHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHH NYKLRDWIFSRQRYWGEPIPIILDDDLNEIPLEEDELPLRLPEIENYKPSGTGESPLSRI CHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH QDWVNIKRNGKTYKRETNTMPQWAGSCWYYIRYLDPNNDNEFASKEKINYWMPVDLYIGG HHHHHHHCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHCCCEEEEEEEEECC AEHSVLHLLYARFWHKVLYDLGYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVEKK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCEECCCCHHHHH DNKFFSKKNNKELKQIVAKMSKSLKNIINPDDIIKEYGADSMRIYEMFMGPLTDSKPWNT HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC QGLIGIFRFLNKIWTIKNKELTKESASKEIISELHKTIKKVTEDIENLNFNTAISSLMIF CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH INELLKHDKNYLEIFKPLTIILSPFAPHLGEELWEYMGETPSIFKSAKWPEYDPNLIIDN HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEC TREIVLQINGKIKDKIILNKGTNEEALKSIALKNHKIMQNIQNKQIIKIITVKDKLINIV CEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHH TR CC >Mature Secondary Structure SEYNFTKIEKKWQDYWDKHKTYKVNEDPNIPKEKRIYILDMFPYPSANGLHVGHPEGYT CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCH ATDILTRYKLLNGFNVLHPIGFDSFGLPAENYAIQTGEHPKKITEKNIKKFKEQIKALGF HHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCC AYDWDREIRTHDENYYKWTQWIFLKLYKKGLAYTKEMPVWYCPDLGTVLSNEEVIQTPDG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCEEECCCC PRSERGFHKVKRKPLRQWILKITEYAERLIKDLEEIDWPESVKEMQKNWIGKSTGAEIEF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEE SVKASKEKIKVFTTRPDTIFGVTYLVLAPEHSIVDKITKDEFKPMIVEYRERETLKSDLE EEECCCCEEEEEECCCCHHHCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RTSLEKDKTGVFTGAYAINPITGEEIPIWIGSYILGTYGTGAVMSVPAHDARDFEFAKKY HHHCCCCCCCEEECCEEECCCCCCCCCEEHHHHHHHCCCCCCEEECCCCCCCCHHHHHHC NLPIKQVVSQTGNNEILTQPFTENGISINTPEEFNNLKTDEIKERVIKWLTENKKGQKKV CCCHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHH NYKLRDWIFSRQRYWGEPIPIILDDDLNEIPLEEDELPLRLPEIENYKPSGTGESPLSRI CHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH QDWVNIKRNGKTYKRETNTMPQWAGSCWYYIRYLDPNNDNEFASKEKINYWMPVDLYIGG HHHHHHHCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHCCCEEEEEEEEECC AEHSVLHLLYARFWHKVLYDLGYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVEKK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCEECCCCHHHHH DNKFFSKKNNKELKQIVAKMSKSLKNIINPDDIIKEYGADSMRIYEMFMGPLTDSKPWNT HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC QGLIGIFRFLNKIWTIKNKELTKESASKEIISELHKTIKKVTEDIENLNFNTAISSLMIF CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH INELLKHDKNYLEIFKPLTIILSPFAPHLGEELWEYMGETPSIFKSAKWPEYDPNLIIDN HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEC TREIVLQINGKIKDKIILNKGTNEEALKSIALKNHKIMQNIQNKQIIKIITVKDKLINIV CEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHH TR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA