Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is yqgI [H]
Identifier: 187918090
GI number: 187918090
Start: 220731
End: 222272
Strand: Direct
Name: yqgI [H]
Synonym: BH0217
Alternate gene names: 187918090
Gene position: 220731-222272 (Clockwise)
Preceding gene: 187918089
Following gene: 187918091
Centisome position: 23.93
GC content: 28.21
Gene sequence:
>1542_bases GTGAATACAATTCAAATAAATAAATTGTTCAATAAAATTTCATTCTGCATAATCAAGTTCATTGCTTATTCTTTAATAAC ATTATTATTTTTTCTAATATCTTACATAGTATACAATTCACTATTCTTTACCAGTAAAAAACAAACACTATTTTTAGATG AAACAAAACATTTCCTACCATTCACATTAAAGAATAAAATAATTAAGATTGCCTTTATTATTAATAAGAGCATAAAAGCA GAAGAAATTACTACTCAAGATATCTATAATATATACAACAACAAAATTTCACATTGGGGAAGCATATCAGATCAAAGTAT TGACATAATCCCACTTGCAAATTCACAATCAAATCTGGCAAGTAAAGTCATATTGCAAACTTTTACTAATGACAATAAAT TTAACAACAGGTATATAAAGATTATAGAATCTAATGAAGAGACGATAGAAACTGTCAACAAAACAACAGGTGCTATTGGT TACTTAACAAAAGAAGATCTTGAAAAATTAGATTTTAAAAAATATCCAAACATTAAATCCCTAAAAATTAAATCCATGTC TATTTTAATAGGGAAAAAAACACTACAAAAAAGTGAAAATGAAATTATTAACATACTAAGCCTTAATCAGATTCAAAAGT TACTCATAGGAAAGATGGATTGGAATGACTTAATATATAAAAATATTAAACCAAATATCATAAAATACTCAAGTTATGAT CAAAATGCAATAAAAGCAGTAGAAGAAAATGAAGGCACAATTGCAGTCGTACCTTGGCATTCTTTCTATAAAAGTGATGC ACCCTTTCTCAAATTATATTATATGAAAAAAAGCATGCCTTTAAACTTAAACTTCATATTATCTACTCCAAGAAATTCTG GCAAATATGGAGGTATTTCTTATTTAATCTTAAACACATTCTATGTCATACTATTAACAGCAATAATCTCAATTTCAACA GGAATTGGTACAGGAATAATGCTTGCAGAATACACTTCAAATAAAGTACTCTATAAAACAGTATCTATGAGTGTTGATAT CTTATCATCAATTCCTGCTATTATTTTTGGACTCTTTGGACTTATCTTTTTTGTTCCAATTTTTGGCATGGGAATACTCT CAGGAGCAATAACAAGTTCTTTAATGATATTACCAATGATTGTTAAAACAACCGAAGAATCACTAAAGTCAATTCCTAAA TCATACAAATACGCTTCATTTGCTCTTGGTGCCAATAAAACAGAAACTATAATTAAAATCCTACTACCCGCTTCTAGCCC AGGTATATTGACAGGAATAGTGCTTGCAATAGGACGTGCCCTTGGAGAAACCGCAGTACTCCTTTTTACAATGGGAACAA ATTTAGGTCTTGCAAGTGCTTTAAATGAGCCTTCAAGAAGTTTAACTGTACATCTACTATTATTATTTCAAGAAGGATAT TTAGACAAAGGTTTTGCAACAGCATCAATACTTATAATGATGATACTTTTAATAAATTTAACATCAAAATTTCTAATCAA CAGACTATATAGGATCAAGTAA
Upstream 100 bases:
>100_bases AAGCTTTATTCTCTACAGCCTTGGTCTTGCTATTATTAGTAATAATAATAAATTCAATTAAACATTTCATTTTATCCTCA TCTAAAAGGCTAAAAATCAA
Downstream 100 bases:
>100_bases ATGAGTCAAGACAAAGCAATTATTAAAACAGAAAATCTAAACTTATTTTATACAGATTTTAAAGCATTAAATAATATTAA TATATCAATACTAAGAAATA
Product: phosphate transport system permease protein PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MNTIQINKLFNKISFCIIKFIAYSLITLLFFLISYIVYNSLFFTSKKQTLFLDETKHFLPFTLKNKIIKIAFIINKSIKA EEITTQDIYNIYNNKISHWGSISDQSIDIIPLANSQSNLASKVILQTFTNDNKFNNRYIKIIESNEETIETVNKTTGAIG YLTKEDLEKLDFKKYPNIKSLKIKSMSILIGKKTLQKSENEIINILSLNQIQKLLIGKMDWNDLIYKNIKPNIIKYSSYD QNAIKAVEENEGTIAVVPWHSFYKSDAPFLKLYYMKKSMPLNLNFILSTPRNSGKYGGISYLILNTFYVILLTAIISIST GIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPMIVKTTEESLKSIPK SYKYASFALGANKTETIIKILLPASSPGILTGIVLAIGRALGETAVLLFTMGTNLGLASALNEPSRSLTVHLLLLFQEGY LDKGFATASILIMMILLINLTSKFLINRLYRIK
Sequences:
>Translated_513_residues MNTIQINKLFNKISFCIIKFIAYSLITLLFFLISYIVYNSLFFTSKKQTLFLDETKHFLPFTLKNKIIKIAFIINKSIKA EEITTQDIYNIYNNKISHWGSISDQSIDIIPLANSQSNLASKVILQTFTNDNKFNNRYIKIIESNEETIETVNKTTGAIG YLTKEDLEKLDFKKYPNIKSLKIKSMSILIGKKTLQKSENEIINILSLNQIQKLLIGKMDWNDLIYKNIKPNIIKYSSYD QNAIKAVEENEGTIAVVPWHSFYKSDAPFLKLYYMKKSMPLNLNFILSTPRNSGKYGGISYLILNTFYVILLTAIISIST GIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPMIVKTTEESLKSIPK SYKYASFALGANKTETIIKILLPASSPGILTGIVLAIGRALGETAVLLFTMGTNLGLASALNEPSRSLTVHLLLLFQEGY LDKGFATASILIMMILLINLTSKFLINRLYRIK >Mature_513_residues MNTIQINKLFNKISFCIIKFIAYSLITLLFFLISYIVYNSLFFTSKKQTLFLDETKHFLPFTLKNKIIKIAFIINKSIKA EEITTQDIYNIYNNKISHWGSISDQSIDIIPLANSQSNLASKVILQTFTNDNKFNNRYIKIIESNEETIETVNKTTGAIG YLTKEDLEKLDFKKYPNIKSLKIKSMSILIGKKTLQKSENEIINILSLNQIQKLLIGKMDWNDLIYKNIKPNIIKYSSYD QNAIKAVEENEGTIAVVPWHSFYKSDAPFLKLYYMKKSMPLNLNFILSTPRNSGKYGGISYLILNTFYVILLTAIISIST GIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIFGLFGLIFFVPIFGMGILSGAITSSLMILPMIVKTTEESLKSIPK SYKYASFALGANKTETIIKILLPASSPGILTGIVLAIGRALGETAVLLFTMGTNLGLASALNEPSRSLTVHLLLLFQEGY LDKGFATASILIMMILLINLTSKFLINRLYRIK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=221, Percent_Identity=33.9366515837104, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790164, Length=245, Percent_Identity=28.1632653061224, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 57602; Mature: 57602
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIQINKLFNKISFCIIKFIAYSLITLLFFLISYIVYNSLFFTSKKQTLFLDETKHFLP CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCC FTLKNKIIKIAFIINKSIKAEEITTQDIYNIYNNKISHWGSISDQSIDIIPLANSQSNLA EECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCCCHHHH SKVILQTFTNDNKFNNRYIKIIESNEETIETVNKTTGAIGYLTKEDLEKLDFKKYPNIKS HHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCEECCCHHHHHHCCHHHCCCCCE LKIKSMSILIGKKTLQKSENEIINILSLNQIQKLLIGKMDWNDLIYKNIKPNIIKYSSYD EEEEEEEEEEEHHHHHCCCCHHEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCC QNAIKAVEENEGTIAVVPWHSFYKSDAPFLKLYYMKKSMPLNLNFILSTPRNSGKYGGIS CHHHHHHHCCCCEEEEEECHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCH YLILNTFYVILLTAIISISTGIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIFGLFG HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH LIFFVPIFGMGILSGAITSSLMILPMIVKTTEESLKSIPKSYKYASFALGANKTETIIKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEECCCCCHHEEEEE LLPASSPGILTGIVLAIGRALGETAVLLFTMGTNLGLASALNEPSRSLTVHLLLLFQEGY EECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCCHHHEEEEEEEECCCC LDKGFATASILIMMILLINLTSKFLINRLYRIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTIQINKLFNKISFCIIKFIAYSLITLLFFLISYIVYNSLFFTSKKQTLFLDETKHFLP CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCC FTLKNKIIKIAFIINKSIKAEEITTQDIYNIYNNKISHWGSISDQSIDIIPLANSQSNLA EECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCCCHHHH SKVILQTFTNDNKFNNRYIKIIESNEETIETVNKTTGAIGYLTKEDLEKLDFKKYPNIKS HHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCEECCCHHHHHHCCHHHCCCCCE LKIKSMSILIGKKTLQKSENEIINILSLNQIQKLLIGKMDWNDLIYKNIKPNIIKYSSYD EEEEEEEEEEEHHHHHCCCCHHEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCC QNAIKAVEENEGTIAVVPWHSFYKSDAPFLKLYYMKKSMPLNLNFILSTPRNSGKYGGIS CHHHHHHHCCCCEEEEEECHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCH YLILNTFYVILLTAIISISTGIGTGIMLAEYTSNKVLYKTVSMSVDILSSIPAIIFGLFG HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH LIFFVPIFGMGILSGAITSSLMILPMIVKTTEESLKSIPKSYKYASFALGANKTETIIKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEECCCCCHHEEEEE LLPASSPGILTGIVLAIGRALGETAVLLFTMGTNLGLASALNEPSRSLTVHLLLLFQEGY EECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCCHHHEEEEEEEECCCC LDKGFATASILIMMILLINLTSKFLINRLYRIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]