Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is pstS1 [H]
Identifier: 187918088
GI number: 187918088
Start: 218838
End: 219743
Strand: Direct
Name: pstS1 [H]
Synonym: BH0215
Alternate gene names: 187918088
Gene position: 218838-219743 (Clockwise)
Preceding gene: 187918085
Following gene: 187918089
Centisome position: 23.73
GC content: 32.12
Gene sequence:
>906_bases TTGACTTATCTAGGATTAATGATATTATATATAGTTGTAAAAGGAGTTAATTTAATGCAAGCTATCAAAATACTCTTTGC TATTTCACTAGCTTTTCTATTTATCAACTGTACAAACAAAGGCAAAGAAAATGTCATTGCAATTGGCGGATCTACTTCAA CAACCTCTATTATGGACGAGATGATCCTACGATATCAAAAAATAAATGATCAAATTAAAGTAACTTATGATGCCCAAGGC AGCAGTGTTGGTATTAAAGGATTATTTGATGGTATTTATAAAATGGCAATTTCTTCAAGAAACGCAACTGAGGAAGAAAT AGCTCAGGGAGCAAAAATCACGGTCATTGCTTATGACGCTTTAATATTCATTACAAGTCCTGACGTCAAGATCACAAATA TTGCAGAAGAAGATTTAGTAAAAATACTTAACGGAAGTATTAGAAATTGGAAACAAGTCGGTGGACCTGATGCTAAAATT AACTTCATAAACCGAGATTCATCATCAGGCTCTTACTCATCTATTACAGAACTAGTTCTTGAAAAAATATTAAAAAATCC CGAAGAAGCTCAATTTAGAAAGGATAGTATTGTGGTAAAATCCAATGGTGAATCAATTGAAAAGATAAGCCTCACGCCCC ACTCGATTGGTTACATTAGTTTTGGATATGCAAGAGGTGCAATAGAAAAAGGTCTACATACACTCTCAATAAACAGCATA TATCCTACAAAAGAAACAATAATAAAGGATAAATATAATATAAAGAGAAGACTAATAGCAATCACAAGCAGTATTTCTGA GAATCAGAACACACTTGATTTTATCAACTTTATGCTAAGTCCAAATGGACAAGACATTGTTGAAGAACAAGGGTTCATAA AAGTTCATACAACTGAAAATAACTAA
Upstream 100 bases:
>100_bases CCTTTTTCAATCTCTCCCGATTTAATTGTACCCATCTAATACCTCAAATTTTTAATGTGCATAATAACTTATATCAAAAA ATCAAAATATTTACTATTCA
Downstream 100 bases:
>100_bases AATTGTGACAAACTTGACTAATAAGTTAATTTAAATATAAACTTAGCAAAGTTCGATTTCTATAGGGGAACTCTTTTAAA GAATGAAATTAACTTTAAAT
Product: phosphate-binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTYLGLMILYIVVKGVNLMQAIKILFAISLAFLFINCTNKGKENVIAIGGSTSTTSIMDEMILRYQKINDQIKVTYDAQG SSVGIKGLFDGIYKMAISSRNATEEEIAQGAKITVIAYDALIFITSPDVKITNIAEEDLVKILNGSIRNWKQVGGPDAKI NFINRDSSSGSYSSITELVLEKILKNPEEAQFRKDSIVVKSNGESIEKISLTPHSIGYISFGYARGAIEKGLHTLSINSI YPTKETIIKDKYNIKRRLIAITSSISENQNTLDFINFMLSPNGQDIVEEQGFIKVHTTENN
Sequences:
>Translated_301_residues MTYLGLMILYIVVKGVNLMQAIKILFAISLAFLFINCTNKGKENVIAIGGSTSTTSIMDEMILRYQKINDQIKVTYDAQG SSVGIKGLFDGIYKMAISSRNATEEEIAQGAKITVIAYDALIFITSPDVKITNIAEEDLVKILNGSIRNWKQVGGPDAKI NFINRDSSSGSYSSITELVLEKILKNPEEAQFRKDSIVVKSNGESIEKISLTPHSIGYISFGYARGAIEKGLHTLSINSI YPTKETIIKDKYNIKRRLIAITSSISENQNTLDFINFMLSPNGQDIVEEQGFIKVHTTENN >Mature_300_residues TYLGLMILYIVVKGVNLMQAIKILFAISLAFLFINCTNKGKENVIAIGGSTSTTSIMDEMILRYQKINDQIKVTYDAQGS SVGIKGLFDGIYKMAISSRNATEEEIAQGAKITVIAYDALIFITSPDVKITNIAEEDLVKILNGSIRNWKQVGGPDAKIN FINRDSSSGSYSSITELVLEKILKNPEEAQFRKDSIVVKSNGESIEKISLTPHSIGYISFGYARGAIEKGLHTLSINSIY PTKETIIKDKYNIKRRLIAITSSISENQNTLDFINFMLSPNGQDIVEEQGFIKVHTTENN
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33308; Mature: 33177
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLGLMILYIVVKGVNLMQAIKILFAISLAFLFINCTNKGKENVIAIGGSTSTTSIMDE CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCHHHHHHH MILRYQKINDQIKVTYDAQGSSVGIKGLFDGIYKMAISSRNATEEEIAQGAKITVIAYDA HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEEEE LIFITSPDVKITNIAEEDLVKILNGSIRNWKQVGGPDAKINFINRDSSSGSYSSITELVL EEEEECCCEEEECCCHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH EKILKNPEEAQFRKDSIVVKSNGESIEKISLTPHSIGYISFGYARGAIEKGLHTLSINSI HHHHCCCHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCEEEEECCC YPTKETIIKDKYNIKRRLIAITSSISENQNTLDFINFMLSPNGQDIVEEQGFIKVHTTEN CCCHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHHCCCEEEEEECCC N C >Mature Secondary Structure TYLGLMILYIVVKGVNLMQAIKILFAISLAFLFINCTNKGKENVIAIGGSTSTTSIMDE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCHHHHHHH MILRYQKINDQIKVTYDAQGSSVGIKGLFDGIYKMAISSRNATEEEIAQGAKITVIAYDA HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEEEE LIFITSPDVKITNIAEEDLVKILNGSIRNWKQVGGPDAKINFINRDSSSGSYSSITELVL EEEEECCCEEEECCCHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH EKILKNPEEAQFRKDSIVVKSNGESIEKISLTPHSIGYISFGYARGAIEKGLHTLSINSI HHHHCCCHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCEEEEECCC YPTKETIIKDKYNIKRRLIAITSSISENQNTLDFINFMLSPNGQDIVEEQGFIKVHTTEN CCCHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHHCCCEEEEEECCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]