Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918078
Identifier: 187918078
GI number: 187918078
Start: 205590
End: 207134
Strand: Direct
Name: 187918078
Synonym: BH0205
Alternate gene names: NA
Gene position: 205590-207134 (Clockwise)
Preceding gene: 187918077
Following gene: 187918080
Centisome position: 22.29
GC content: 27.31
Gene sequence:
>1545_bases ATGATTCTCAAAGAAATAAAAAAAGTAGAAGATTTAACAGAAAAGGATATCATTTTTTCAAAGATTGGAAATTTAGCTAA GCTCAGTACAAGAGTAAATGAAAAAATAATCGAGCTCTTAAATAAAGGCAATGTTTCACATATCCCAGTAATAAATAATC ACGAAAATATTCCACATGAAAAGCTAATAAATACAGTTAATGAAGAGCTTCTAAACAATGAAATAAATTTTTTAAAAGAA GAACTAATAGAAGCTTTAAAAGATATCTATAAACCATTTTCAGAAAAAGATAAAATGTTTATAATAGCTGGAAGGAAAAC ATTAATTAATTTAAATACGCTAATGGAAAGAGAACCTGATCTTATTTACTTCAAGGAAATAATTGAGGGCAGTTTCAAGA TTTTACCAAAACATAAAATAATATCTATTCAAAAAATATTACTCAAAATATATGATTATTTTAATTTCCAAAAAATTATA GACAAAGACAATATTAATAACATAAAAACAATACAAAAACTATATCTACACTCAATCAGAAGAGATTATGAATTTTTCAG GGAGCAAGTCAAAACAGAAGGCGACTCTATATTACTACATGCAATTGATACTACGATTTACTTTTTAATAACTATTGCCC AGTTAAATAAAGAAAGGGCAGCAAAAGATGCTCCACGATCAACATTAAAATTTTTCATTGACAAATCGAACTACACAGAA TTCACAGAATTCTTCTACGATAATGACATAATACTACAAGCTGCACTTGGAGTATTATTACACCCAATTGGACTCATGCA TACCACAATATTACAAAAATTAAGAGAAAAGATTAGTCTTAAAAACAAAGACACAAAAGAACAATATATGTCTAAAATAG AGATTTTAGAGAAAAGTATTAATGTTTCTAAAAATCTATTCAGATTAAGAGAGGATATTTCTGCTATTACAAAAATGATA ATAAATGGACAAAAAAGCTATCTTAACATCAAAAATCGTGCAGAGACAACAACAAAAAAATTTACCCATGAACTCATTAG GATTTTTTGCATAATAGATATTTATGATGAAATGGTTAATCCAATAATAATCAAAGAACCCGTTAATCCCCTAGAGGCCA TTGAATTTTTAATTAAAAACAGTGAAAAATACTATTGGGCAAAAGACAAACCAGAAGAATATTTAAAAAACAAAAAATTT GACATAGAAATGCTAAAAAATTTTTTAAAAATACTTGCACCATTTGATTGTGGAACAATAGTAGATGCATATACAAAGGA TTACGAGGGACCTCTATTTAAAGCAGTCGTTATGAAGTACACAACAGGTATTTTGCCTATTGTGTCCATCATAAAACAAA AGGACAGATCCTATAAAATTGGAGATATACTACTAAACCTTGAATCTAGAGAAATCATCATAAAGGGGCAAAATGGAGAC ATTAAGAAGAGTCCATTTAAAAACACTGATAAATTTGAATTAAGACACAACATTGAAGAACTTAAAAGTGATGAATTTCA ACTCTTAACTTCTATGCAAGATTAA
Upstream 100 bases:
>100_bases GTATAGCTGCATCTCAATTGGTAAAGCATGGGATAAAATCTTTGTCTCACAAATCCAATTATCTTAGACAACAATACTTA AAGCGTTAAGAGGACTCCTA
Downstream 100 bases:
>100_bases TAATCCTACACATAGGGACTAACTTTAAAAAAATCAAGCCTTGAGCCTCCATATTTTCTAGAATCATATTTAGAAAGTCT TAAAATATTGCTGTCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MILKEIKKVEDLTEKDIIFSKIGNLAKLSTRVNEKIIELLNKGNVSHIPVINNHENIPHEKLINTVNEELLNNEINFLKE ELIEALKDIYKPFSEKDKMFIIAGRKTLINLNTLMEREPDLIYFKEIIEGSFKILPKHKIISIQKILLKIYDYFNFQKII DKDNINNIKTIQKLYLHSIRRDYEFFREQVKTEGDSILLHAIDTTIYFLITIAQLNKERAAKDAPRSTLKFFIDKSNYTE FTEFFYDNDIILQAALGVLLHPIGLMHTTILQKLREKISLKNKDTKEQYMSKIEILEKSINVSKNLFRLREDISAITKMI INGQKSYLNIKNRAETTTKKFTHELIRIFCIIDIYDEMVNPIIIKEPVNPLEAIEFLIKNSEKYYWAKDKPEEYLKNKKF DIEMLKNFLKILAPFDCGTIVDAYTKDYEGPLFKAVVMKYTTGILPIVSIIKQKDRSYKIGDILLNLESREIIIKGQNGD IKKSPFKNTDKFELRHNIEELKSDEFQLLTSMQD
Sequences:
>Translated_514_residues MILKEIKKVEDLTEKDIIFSKIGNLAKLSTRVNEKIIELLNKGNVSHIPVINNHENIPHEKLINTVNEELLNNEINFLKE ELIEALKDIYKPFSEKDKMFIIAGRKTLINLNTLMEREPDLIYFKEIIEGSFKILPKHKIISIQKILLKIYDYFNFQKII DKDNINNIKTIQKLYLHSIRRDYEFFREQVKTEGDSILLHAIDTTIYFLITIAQLNKERAAKDAPRSTLKFFIDKSNYTE FTEFFYDNDIILQAALGVLLHPIGLMHTTILQKLREKISLKNKDTKEQYMSKIEILEKSINVSKNLFRLREDISAITKMI INGQKSYLNIKNRAETTTKKFTHELIRIFCIIDIYDEMVNPIIIKEPVNPLEAIEFLIKNSEKYYWAKDKPEEYLKNKKF DIEMLKNFLKILAPFDCGTIVDAYTKDYEGPLFKAVVMKYTTGILPIVSIIKQKDRSYKIGDILLNLESREIIIKGQNGD IKKSPFKNTDKFELRHNIEELKSDEFQLLTSMQD >Mature_514_residues MILKEIKKVEDLTEKDIIFSKIGNLAKLSTRVNEKIIELLNKGNVSHIPVINNHENIPHEKLINTVNEELLNNEINFLKE ELIEALKDIYKPFSEKDKMFIIAGRKTLINLNTLMEREPDLIYFKEIIEGSFKILPKHKIISIQKILLKIYDYFNFQKII DKDNINNIKTIQKLYLHSIRRDYEFFREQVKTEGDSILLHAIDTTIYFLITIAQLNKERAAKDAPRSTLKFFIDKSNYTE FTEFFYDNDIILQAALGVLLHPIGLMHTTILQKLREKISLKNKDTKEQYMSKIEILEKSINVSKNLFRLREDISAITKMI INGQKSYLNIKNRAETTTKKFTHELIRIFCIIDIYDEMVNPIIIKEPVNPLEAIEFLIKNSEKYYWAKDKPEEYLKNKKF DIEMLKNFLKILAPFDCGTIVDAYTKDYEGPLFKAVVMKYTTGILPIVSIIKQKDRSYKIGDILLNLESREIIIKGQNGD IKKSPFKNTDKFELRHNIEELKSDEFQLLTSMQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60346; Mature: 60346
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKEIKKVEDLTEKDIIFSKIGNLAKLSTRVNEKIIELLNKGNVSHIPVINNHENIPHE CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHH KLINTVNEELLNNEINFLKEELIEALKDIYKPFSEKDKMFIIAGRKTLINLNTLMEREPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHCCCCC LIYFKEIIEGSFKILPKHKIISIQKILLKIYDYFNFQKIIDKDNINNIKTIQKLYLHSIR HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RDYEFFREQVKTEGDSILLHAIDTTIYFLITIAQLNKERAAKDAPRSTLKFFIDKSNYTE HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHH FTEFFYDNDIILQAALGVLLHPIGLMHTTILQKLREKISLKNKDTKEQYMSKIEILEKSI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH NVSKNLFRLREDISAITKMIINGQKSYLNIKNRAETTTKKFTHELIRIFCIIDIYDEMVN HHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PIIIKEPVNPLEAIEFLIKNSEKYYWAKDKPEEYLKNKKFDIEMLKNFLKILAPFDCGTI CEEEECCCCHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH VDAYTKDYEGPLFKAVVMKYTTGILPIVSIIKQKDRSYKIGDILLNLESREIIIKGQNGD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHEEEEECCCEEEEECCCCC IKKSPFKNTDKFELRHNIEELKSDEFQLLTSMQD CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure MILKEIKKVEDLTEKDIIFSKIGNLAKLSTRVNEKIIELLNKGNVSHIPVINNHENIPHE CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHH KLINTVNEELLNNEINFLKEELIEALKDIYKPFSEKDKMFIIAGRKTLINLNTLMEREPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHCCCCC LIYFKEIIEGSFKILPKHKIISIQKILLKIYDYFNFQKIIDKDNINNIKTIQKLYLHSIR HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RDYEFFREQVKTEGDSILLHAIDTTIYFLITIAQLNKERAAKDAPRSTLKFFIDKSNYTE HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHH FTEFFYDNDIILQAALGVLLHPIGLMHTTILQKLREKISLKNKDTKEQYMSKIEILEKSI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH NVSKNLFRLREDISAITKMIINGQKSYLNIKNRAETTTKKFTHELIRIFCIIDIYDEMVN HHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PIIIKEPVNPLEAIEFLIKNSEKYYWAKDKPEEYLKNKKFDIEMLKNFLKILAPFDCGTI CEEEECCCCHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH VDAYTKDYEGPLFKAVVMKYTTGILPIVSIIKQKDRSYKIGDILLNLESREIIIKGQNGD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHEEEEECCCEEEEECCCCC IKKSPFKNTDKFELRHNIEELKSDEFQLLTSMQD CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA