| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733461
Identifier: 187733461
GI number: 187733461
Start: 1014404
End: 1014682
Strand: Direct
Name: 187733461
Synonym: SbBS512_E1115
Alternate gene names: NA
Gene position: 1014404-1014682 (Clockwise)
Preceding gene: 187733397
Following gene: 187733822
Centisome position: 21.98
GC content: 53.05
Gene sequence:
>279_bases TTGTGCAACTTCAGTGATGATGGTCTGGCTGAGGCGGATAATAATGCCGCGGAAAGAGCGCTTCGTGCAGTCTGTCTCGG AAAGAAAAACTTTATGTTCTTCGGCAGCGATCACGGTGGAGAGCGTGGTGCGCTACTGTACGGGCTGATCGGCACCTGCC GACTGAACGGTATCGATCCGGAAGCGTATCTGCGCTATATCCTGAGCGTACTGCCGGAATGGCCTTCCAACCGTGTTGAC GAACTCCTGCCATGGAACGTAGCACTCACCAATAAATAA
Upstream 100 bases:
>100_bases AGACGGTTCTTGCTGCACGCTTACGGAGAAAGAACACACGTTATCGAAAAAATGCCGTCTGAGAGATGCGTTCCGGTATA TCAGGAAGCACTGGGTTGCG
Downstream 100 bases:
>100_bases GCGTCAATACGGTGCTCCGTTGACGCTGATATGACTTTCCGTGTCAAACCGGAATCTCGTAAGCGTACAGCCTGAACCGT CTGGTCAGAATCTGACGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVD ELLPWNVALTNK
Sequences:
>Translated_92_residues MCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVD ELLPWNVALTNK >Mature_92_residues MCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVD ELLPWNVALTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 10177; Mature: 10177
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEHHHHEEECCCCH EAYLRYILSVLPEWPSNRVDELLPWNVALTNK HHHHHHHHHHCCCCCCCCCHHHCCCCEEECCC >Mature Secondary Structure MCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEHHHHEEECCCCH EAYLRYILSVLPEWPSNRVDELLPWNVALTNK HHHHHHHHHHCCCCCCCCCHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]