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The map label for this gene is ygiV [H]

Identifier: 187733085

GI number: 187733085

Start: 3214148

End: 3214630

Strand: Reverse

Name: ygiV [H]

Synonym: SbBS512_E3457

Alternate gene names: 187733085

Gene position: 3214630-3214148 (Counterclockwise)

Preceding gene: 187732013

Following gene: 187731712

Centisome position: 69.64

GC content: 52.38

Gene sequence:

>483_bases
ATGACAAACCTGACACTGGATGTAAACATTATCGATTTCCCATCAATCCCTGTGGCGATGTTGCCGCACCGCTGTAGCCC
TGAGTTGCTCAACTACAGTGTGGCGAAATTTATCATGTGGCGTAAAGAGACGGGGCTTTCTCCTGTTAACCAAAGCCAGA
CTTTTGGCGTCGCCTGGGACGACCCTGCCACCACCGCACCGAAAGCGTTTCGCTTTGATATCTGCGGCAGCGTTAGCGAA
CCGATTCCCGATAATCGTTATGGTGTGAGCAATGGTGAACTTACCGGTGGACGTTATGCCGTGGCCCGCCACGTTGGCGA
GCTGGACGATATTTCACACACGGTATGGGGCATCATTCGCCACTGGCTGCCTGCAAGCGGCGAGAAAATGCGTAAAGCAC
CGATTCTGTTTCACTACACCAATCTTGCCGAAGGTATGACAGAACAGCGACTGGAAACGGATGTTTATGTGCCGTTAGCG
TGA

Upstream 100 bases:

>100_bases
AATTCTGTTGAAATTGACGTCAAACAGATCCGCAAAGTAAATCCGTAATTGTTACCGCTCCCGGGACGCGTTCCCGGGAA
TAATTTCGCAGGGAGGCAAA

Downstream 100 bases:

>100_bases
TGGGGAATCTTTACCGGAGTGTGAGCCAAATCACTCGCGATAAGTTTGAGCGAACAATGCCACAGGCGTATTGTTGTTGG
GCTTATAATTTCTCCGGTAA

Product: transcription activator effector binding domain/DNA gyrase inhibitor domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSE
PIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA

Sequences:

>Translated_160_residues
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSE
PIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
>Mature_159_residues
TNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSEP
IPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=160, Percent_Identity=98.75, Blast_Score=332, Evalue=6e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 17859; Mature: 17727

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD
CCCEEEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
DPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIR
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
HWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
HHCCCCCCCHHCCCEEEEECCHHHCHHHHHHCCCEEEECC
>Mature Secondary Structure 
TNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD
CCEEEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
DPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIR
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
HWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
HHCCCCCCCHHCCCEEEEECCHHHCHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]