| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732907
Identifier: 187732907
GI number: 187732907
Start: 974699
End: 974890
Strand: Direct
Name: 187732907
Synonym: SbBS512_E1064
Alternate gene names: NA
Gene position: 974699-974890 (Clockwise)
Preceding gene: 187731415
Following gene: 187734105
Centisome position: 21.12
GC content: 52.6
Gene sequence:
>192_bases GTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACT GCCGGACATCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGG TACGCACCAGAAAATCATTGATATGGCCATGA
Upstream 100 bases:
>100_bases GGTGCGCCAATATCCGTCATCCGCCAATACATTGAACAACAGCAAACACCTGGGGTAATGCTGCCAACTTACTGATTTAG TGTATGATGGTGATTTTAAG
Downstream 100 bases:
>100_bases ATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGC CGCAGTCGGTAACCTCGCGC
Product: IS1 transposase orfA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
Sequences:
>Translated_63_residues MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP >Mature_63_residues MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6821; Mature: 6821
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC IWP CCC >Mature Secondary Structure MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC IWP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA