| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is wcaK
Identifier: 187731153
GI number: 187731153
Start: 1091858
End: 1093138
Strand: Direct
Name: wcaK
Synonym: SbBS512_E1187
Alternate gene names: 187731153
Gene position: 1091858-1093138 (Clockwise)
Preceding gene: 187732916
Following gene: 187730685
Centisome position: 23.65
GC content: 54.1
Gene sequence:
>1281_bases ATGAAATTACTTATTCTGGGCAACCACACTTGCGGCAATCGTGGCGACAGCGCCATCTTGCGTGGCTTACTTGATGCCAT CAATATCCTCAATCCACACGCCGAAGTGGACGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTGCTCAACCGCCCGG TAATGGGCGATCCGCTGTTCCTGCAAATGAAACAACACAATAGCGCGGCGGGCGTTGTCGGGCGCGTTAAAAAAGTCCTC CGTCGCCGCTATCAGCACCAGGTATTGCTCTCACGCGTCACCGACACTGGCAAGCTGCGCAATATCACCATCGCCCAGGG ATTCACCGACTTCGTGCGCCTGCTGTCAGGTTACGACGCCATTATCCAGGTCGGCGGATCGTTTTTTGTCGATCTCTATG GCGTGCCGCAGTTTGAACATGCACTTTGCACGTTTATGGCGAAAAAGCCGCTGTTTATGATTGGTCACAGTGTTGGCCCG TTCCAGGATGAGCAATTTAACCAACTGGCGAACTACGTTTTTGGTCACTGCGACGCGCTGATCCTGCGCGAATCGGTCAG CCTTGATCTGATGAAACGCAGCAATATCACCACCGCAAAAGTGGAACATGGCGTCGATACCGCGTGGCTGGTCGATCACC ACACCGAAGATTTCACCGCCAGCTATGCCGTCCAAAACTGGCTGGACGTTGCCGCACAACAGAAAACGGTGGCAATTACC CTGCGCGAACTGGCACCGTTCGACAAACGTCTCGGCACCACTCAACAAACGTATGAAAAAGCCTTTGCCGGGGTGGTCAA TCGCATTCTCGACGAAGGGTATCAGGTGATTGCGCTTTCCACCTGTACGGGCATCGACAGCTATAACAAAGACGACCGCA TGGTGGCGCTCAACCTGCGCCAGCATATCAGCGATCCTGCCCGTTACCACGTAGTGATGGATGAACTCAACGATCTGGAA ATGGGCAAAATTCTGGGGGCCTGTGAACTCACCGTCGGTACGCGCCTGCACTCTGCCATTATCTCGATGAACTTTGCCAC TCCGGCGATTGCCATCAACTATGAACATAAATCCGCCGGGATTATGCAACAACTGGGGCTACCAGAGATGGCAATTGATA TCCGTCATTTATTAGACGGCAGCCTGCAAGCGATGGTTGCTGATACCTTAGGCCAGCTTCCGGCGCTGAACACGCGACTT AACGAAGCCGTCAGTCGCGAACGCCAGGCAGGAATGCAGATGGTGCAATCTGTGCTTGAGCGCATCGGGGAGGCGAAATG A
Upstream 100 bases:
>100_bases CTTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAAAAGCGGCAACGAACAAAACAAACACAGCCTCACCTGGC ATCAAATTTATGAGGAAAAA
Downstream 100 bases:
>100_bases AGGTCGGCTTCTTTTTACTGAAATTTCCGCTGTCGTCGGAAACCTTCGTCCTCAATCAAATTACCGCGTTTATTGATATG GGCTTTGAGGTGGAGATTGT
Product: putative pyruvyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL RRRYQHQVLLSRVTDTGKLRNITIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQNWLDVAAQQKTVAIT LRELAPFDKRLGTTQQTYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLE MGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNTRL NEAVSRERQAGMQMVQSVLERIGEAK
Sequences:
>Translated_426_residues MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL RRRYQHQVLLSRVTDTGKLRNITIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQNWLDVAAQQKTVAIT LRELAPFDKRLGTTQQTYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLE MGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNTRL NEAVSRERQAGMQMVQSVLERIGEAK >Mature_426_residues MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL RRRYQHQVLLSRVTDTGKLRNITIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQNWLDVAAQQKTVAIT LRELAPFDKRLGTTQQTYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLE MGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNTRL NEAVSRERQAGMQMVQSVLERIGEAK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788358, Length=426, Percent_Identity=98.1220657276995, Blast_Score=870, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 47346; Mature: 47346
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLF CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCEECCCCCCCCEE LQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNITIAQGFTDFVRLLSGYDA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCHH IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDAL HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH ILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQNWLDVAAQQKTVAIT HHHHHCCHHHHHCCCCCEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE LRELAPFDKRLGTTQQTYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLR HHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEHH QHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAG HHCCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCHHHH IMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNTRLNEAVSRERQAGMQMVQSVLE HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RIGEAK HHCCCC >Mature Secondary Structure MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLF CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCEECCCCCCCCEE LQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNITIAQGFTDFVRLLSGYDA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCHH IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDAL HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH ILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQNWLDVAAQQKTVAIT HHHHHCCHHHHHCCCCCEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE LRELAPFDKRLGTTQQTYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLR HHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEHH QHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAG HHCCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCHHHH IMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNTRLNEAVSRERQAGMQMVQSVLE HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RIGEAK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759852; 9278503 [H]