| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is frcK
Identifier: 187730796
GI number: 187730796
Start: 3126419
End: 3127132
Strand: Reverse
Name: frcK
Synonym: SbBS512_E3357
Alternate gene names: 187730796
Gene position: 3127132-3126419 (Counterclockwise)
Preceding gene: 187731619
Following gene: 187730160
Centisome position: 67.75
GC content: 53.64
Gene sequence:
>714_bases GTGAAAATTGAATTAACGGTGAATGGGCTGAAGATACAGGCACAGTACCAGAACGAAGAGATTGAAAATGTACATAAACC GTTGCTGCGTATGCTGGCGGCCTTACAGACGGTAAATCCGCAGCGGCGTACGGTGGTTTTTCTTTGCGCTCCGCCGGGGA CGGGTAAATCTACCCTAACCACCTTCTGGGAATATCTCGCGCAACAAGCCCCGGAGCTGCCCGCTATTCAGACGCTCCCG ATGGATGGTTTTCACCATTACAATAGCTGGCTGGACGCGCATCAATTGCGCCCCTTCAAAGGCGCACCAGAGACATTTGA CGTTGCGAAACTGGCGGAAAATCTGCGCCAGGTGGTGGAAGGGGATTGTACGTGGCCGCAGTACGATCGACAAAAGCATG ATCCTGTTGAAGATGCGTTGCACGTTACCGCACCACTCGTCATCGTCGAAGGAAACTGGTTGTTGCTGGACGACGAGAAG TGGTGCCAGCTTGCGCAATTTTGTGATTTCTCGATCTTTATCAACGCGCCAGCTACTGCGTTGCGGGAGCGTCTGGTGGG GCGCAAGCTGGCGGGAGGGGTATCGCTGGCAGATGCAGAAGCCTTTTATGACCGTACCGACGGGCCGAATGTTCGCCGGG TGCTGGAAGAGAGTCTGCCTGCAAATTTGACCTTAATGATGACCGCTACGGGTGAATATCGTCTGGTGGATTAA
Upstream 100 bases:
>100_bases AGTTCGCCGATTTCGCCGTCTGGTCAGAGGCGCGTTTTAGCGGGATGGTCAAAACGGCGCTGACGCTGGCAGTAACGACA ATCTTAAAGGAATTAACGCC
Downstream 100 bases:
>100_bases CGTTCCTGATTACACCATCTTCCAGTCGCACCACACGAGAGAAATGACGCCGGGTAAATGCGGCGTCATGACTGATTGCT ACCACGCTCGTGCCTCGCTG
Product: putative fructose transport system kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQAPELPAIQTLP MDGFHHYNSWLDAHQLRPFKGAPETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD
Sequences:
>Translated_237_residues MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQAPELPAIQTLP MDGFHHYNSWLDAHQLRPFKGAPETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD >Mature_237_residues MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQAPELPAIQTLP MDGFHHYNSWLDAHQLRPFKGAPETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD
Specific function: Unknown
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789296, Length=237, Percent_Identity=86.0759493670886, Blast_Score=426, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004566 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26771; Mature: 26771
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRTVVFLCAPPGTGKSTLT CEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH TFWEYLAQQAPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLAENLRQVVE HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC GDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWCQLAQFCDFSIFINAPATA CCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCEEEECCHHHHHHHHHCCEEEEECCCHHH LRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD HHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECC >Mature Secondary Structure MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRTVVFLCAPPGTGKSTLT CEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH TFWEYLAQQAPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLAENLRQVVE HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC GDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWCQLAQFCDFSIFINAPATA CCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCEEEECCHHHHHHHHHCCEEEEECCCHHH LRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD HHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2546007; 9278503 [H]