| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is plsC
Identifier: 187730739
GI number: 187730739
Start: 3210374
End: 3211111
Strand: Reverse
Name: plsC
Synonym: SbBS512_E3455
Alternate gene names: 187730739
Gene position: 3211111-3210374 (Counterclockwise)
Preceding gene: 187731712
Following gene: 187733539
Centisome position: 69.56
GC content: 49.46
Gene sequence:
>738_bases ATGCTATATATCTTTCGTCTTATTATTACCGTGATTTACAGCATCTTAGTCTGTGTATTCGGCTCCATTTACTGCCTTTT CAGCCCGCGTAACCCGAAACATGTGGCCACCTTTGGGCATATGTTTGGCCGTCTTGCGCCGCTGTTCGGCCTGAAAGTTG AGTGCCGCAAACCTGCAGATGCTGAAAGCTACGGCAATGCTATCTATATCGCTAACCACCAGAACAACTATGACATGGTG ACAGCATCGAACATTGTGCAACCGCCGACGGTGACGGTAGGTAAAAAGAGCTTGCTGTGGATCCCCTTCTTCGGGCAATT GTACTGGTTAACCGGCAACTTATTGATCGACAGAAACAATCGCACTAAAGCTCACGGCACCATTGCGGAAGTCGTGAATC ATTTCAAAAAACGCCGTATTTCCATCTGGATGTTCCCGGAAGGAACCCGCAGCCGTGGTCGCGGCCTGCTACCGTTCAAG ACTGGAGCATTTCACGCGGCAATTGCGGCGGGCGTCCCGATTATTCCCGTGTGCGTCTCTACAACTTCGAATAAGATTAA TCTTAATCGACTGCACAACGGTCTGGTGATTGTCGAAATGCTGCCGCCAATTGACGTCAGTCAGTATGGCAAAGATCAGG TTCGTGAGCTGGCTGCCCATTGTCGTTCGATAATGGAACAAAAAATCGCCGAGCTCGATAAAGAAGTCGCAGAACGCGAA GCCGCCGGAAAAGTTTAA
Upstream 100 bases:
>100_bases CGATTAACAATACGCTTTTCCAGAGAGCGGCTTTTAACAATGCCCTAACCTGATTTCAGGTGACGTACAATGCCAGTCTC TCAGACCTTCAGAGGTTGTT
Downstream 100 bases:
>100_bases GTCGGCAATCTGTATTTTTGCGGGGAACACTTTCCTGCACGGTATTACTTTAGCCAGTTTTACATGGAGCAAATATGTCA CTCAGTCGGCGTCAGTTCAT
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMV TASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE AAGKV
Sequences:
>Translated_245_residues MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMV TASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE AAGKV >Mature_245_residues MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMV TASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE AAGKV
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the 2 position. This enzyme can utilize either acyl-CoA or acyl-ACP as the fatty acyl donor [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=235, Percent_Identity=28.0851063829787, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI15100175, Length=235, Percent_Identity=28.0851063829787, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI6041665, Length=231, Percent_Identity=27.7056277056277, Blast_Score=105, Evalue=5e-23, Organism=Escherichia coli, GI1789395, Length=245, Percent_Identity=99.5918367346939, Blast_Score=508, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17564032, Length=183, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17568319, Length=214, Percent_Identity=33.6448598130841, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6320151, Length=169, Percent_Identity=37.8698224852071, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI281364648, Length=236, Percent_Identity=29.2372881355932, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI24582856, Length=236, Percent_Identity=29.2372881355932, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI24582854, Length=236, Percent_Identity=29.2372881355932, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI24641614, Length=214, Percent_Identity=34.5794392523364, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24641612, Length=214, Percent_Identity=34.5794392523364, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27424; Mature: 27424
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPAD CHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCC AESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNN HHHHCCEEEEEECCCCCCEEEECCCCCCCCEEECCCEEEEEEHHCEEEEEECEEEEECCC RTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVS CCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEE TTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE CCCCEEEHEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGKV HCCCC >Mature Secondary Structure MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPAD CHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCC AESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNN HHHHCCEEEEEECCCCCCEEEECCCCCCCCEEECCCEEEEEEHHCEEEEEECEEEEECCC RTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVS CCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEE TTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE CCCCEEEHEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGKV HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1557036; 9278503 [H]