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The map label for this gene is tdcR

Identifier: 187730417

GI number: 187730417

Start: 3019536

End: 3019754

Strand: Reverse

Name: tdcR

Synonym: SbBS512_E3238

Alternate gene names: 187730417

Gene position: 3019754-3019536 (Counterclockwise)

Preceding gene: 187731574

Following gene: 187733778

Centisome position: 65.42

GC content: 30.59

Gene sequence:

>219_bases
ATGAGCAAGTTCTCAAATTTTATTATAAATAAACCATTTTCAGCGATAAATACTGCGGCACGTCACATTTTTTCACGCTA
TTTGTTGGAGAACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACAGGTATTGATCATCTCGAACAATTGATTA
ACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAA

Upstream 100 bases:

>100_bases
CGATAACATCATTCGTTATGTGGTTAATACAAAAAAGGGGCTGAGACCATATTTCAAGCAATTACCGGATAATTACCAGG
CAAAATTTGAGTTAAATTTA

Downstream 100 bases:

>100_bases
ATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGGTCGCCGCGATAAG
GTCAGACGAAGTCAGCAAGG

Product: DNA-binding transcriptional activator TdcR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

Sequences:

>Translated_72_residues
MSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
>Mature_71_residues
SKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

Specific function: Probable trans-acting positive activator for the tdc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082214, Length=72, Percent_Identity=94.4444444444444, Blast_Score=137, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8574; Mature: 8443

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHCCCCCCC
DRTSFCECNRFP
CCCCCCCCCCCC
>Mature Secondary Structure 
SKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
CCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHCCCCCCC
DRTSFCECNRFP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2660107; 2573820; 9278503; 7928991 [H]