Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
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Accession | NC_010658 |
Length | 4,615,997 |
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The map label for this gene is yegL [H]
Identifier: 187730403
GI number: 187730403
Start: 1057677
End: 1058336
Strand: Direct
Name: yegL [H]
Synonym: SbBS512_E1160
Alternate gene names: 187730403
Gene position: 1057677-1058336 (Clockwise)
Preceding gene: 187732335
Following gene: 187730814
Centisome position: 22.91
GC content: 52.27
Gene sequence:
>660_bases ATGAGCGAACAAATCACGTTTGCCACCAGCGATTTTGCCAGTAACCCGGAACCACGTTGCCCCTGCATTTTGCTGCTGGA TGTTTCTGGTTCTATGAACGGTAGACCCATTAATGAACTTAACGCCGGATTGGTTACCTTTCGCGATGAGCTGCTTGCCG ATTCGCTGGCCTTAAAAAGAGTTGAACTCGGCATTGTGACGTTCGGCCCGGTGCATGTGGAACAACCCTTTACCAGCGCC GCTAATTTTTTCCCGCCCATCCTGTTTGCCCAGGGCGATACACCAATGGGCGCTGCCATTACCAAAGCCCTGGATATGGT AGAGGAGCGGAAACGTGAGTATCGTGCAAATGGTATTTCGTATTATCGCCCGTGGATTTTCCTGATCACCGATGGCGCTC CAACCGATGAGTGGCAGGCTGCCGCCAACAAAGTGTTTCAGGGGGAAGAAGATAAGAAGTTTGCCTTCTTTTCCATCGGT GTTCAGGGGGCGGATATGAAGACTCTGGCACAAATCAGCGTTCGTCAGCCTTTGCCACTGCAGGGATTACAATTCCGTGA ACTGTTTAGCTGGTTATCCAGTTCGCTGCGTTCGGTTTCCCGCTCCACGCCGGGAACGGAAGTTGTGCTGGAAGCGCCAA AAGGCTGGACGTCAGTGTGA
Upstream 100 bases:
>100_bases CCGCCGGGACTAATTCTGAAAGTTTCTTCGTTTGCTCTTATTTCATTATTGCAGTCGGTATGATACCGGACCTCAATAAT TCTCTAAGAAAGGATTTCTT
Downstream 100 bases:
>100_bases GCTGGCGTCTGGTTTATGCATCCGCTGTTGGAACGTCGCACATTAGCGCTGATTTACCTTGTCAGGATGCCTGCCAGATG CAGGTTGCCTGGCTAAATGA
Product: von Willebrand factor type A domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADSLALKRVELGIVTFGPVHVEQPFTSA ANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV
Sequences:
>Translated_219_residues MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADSLALKRVELGIVTFGPVHVEQPFTSA ANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV >Mature_218_residues SEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADSLALKRVELGIVTFGPVHVEQPFTSAA NFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIGV QGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV
Specific function: Unknown
COG id: COG4245
COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
Organism=Escherichia coli, GI1788388, Length=219, Percent_Identity=98.6301369863014, Blast_Score=444, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011392 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 24152; Mature: 24021
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADSLALKR CCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGIS EEEEEEEECCEECCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCE YYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIGVQGADMKTLAQISVRQPLPL EECCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCC QGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC >Mature Secondary Structure SEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADSLALKR CCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGIS EEEEEEEECCEECCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCE YYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIGVQGADMKTLAQISVRQPLPL EECCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCC QGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]