Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is amsA [H]
Identifier: 187736556
GI number: 187736556
Start: 2527629
End: 2530031
Strand: Direct
Name: amsA [H]
Synonym: Amuc_2078
Alternate gene names: 187736556
Gene position: 2527629-2530031 (Clockwise)
Preceding gene: 187736555
Following gene: 187736557
Centisome position: 94.88
GC content: 52.48
Gene sequence:
>2403_bases ATGACAAATAATACCGCTCCCACTCCGCCTGTTACGGAAAACACAGAAGAAACAGCTCTTTCCCTGGACACGGTGCTGAC GATCCTGCGCCGTTACTGGTTCATCATCATTCTGGCAGCTCTCGCCGGAGGCACGGCGGCCTATTACCTGGCCGGCAAAC AGAATTATATTTACCAAAAAACGGCCAGCGTCCTGATGCGCGATGCCAAAACAGGCAGCGACGCCTCTTCCGAACGCATC ATGGCGGAATTGAACATAGACCCCAACGCCGCTAATCTGGCCAATGAAAGCCTCGTTCTCAAATCCACCGCATTAATGAA CAAAGTGGTGGAAGACCTCAGCCTCAACACATCCTATTGGCAAAAAAAAGACTTCAGGGAGCTTGATCTTTACCATGCCA CCCCCTTATTGGTGCACTTTGAACAGATCGACAAACAACGAGCCTGCACCCTGAACATCACGCCGCTGGATGAAAAACGC TTCATGCTTGGCCATCCCAATGATCAGGGGGAACTCATCCTGCTGGAAGGTTTTTACGGAAAACCGCTTACGCTTCCCTT TGCCACCATTTCCGTCCATCCCACCTCCCTGATGACCGACGCATGGAACGGAAAAACCGTCATCGTAAGACACTCTCCCG TTCTTGAAACCGCCAACGCCCTGCTCCGTGGCCTGACAATTACCCGTCCAGACTCCAAGGAATCCAGCCTTCTGGAGATG ACTCTGACATCCAGCAATCCCCAGAAAGCCGAAGACACGCTCAACCACCTTATCCAGGTTTACAACCAAATTTCCAAGGA CGAACGGAACAAGGCGTCCCTTAAAACGAAAATCTTCATTAGGGATCGACTAAAAGAACTTGGAGCCTCCCTGAGCGACG TGGACAAAAAACTTACCGAATTTAAAACGAAGAGTGACATCGTCAAAGATGCGGACACAACCATGAGCGCGGACTTCAGC ACCTCCCAGGCGCTGGAAAAGGAAATCTTTGATCTTGAAACCCAAATCAAACTGGCGTCCACCCTTGCTGACAATCTCAA GGAAAGCGAACGCAAACATGGGCTGATCTCCGTAGAAACCGGTCTTCCCGATTCCGGCATCGCCCGGCAGATAGAACATT ACAATGAGGCTTATCTGGAATATCAGAAAATCGCCGGAAGCGCCGGCTCCCAAAACCCGATTGCCGTGAGCTTGAGGGAC AGGATGAATTCCACCAGAGCGGCGGCTAACAAAGCTCTCTCCAACTACCGCAGCAATCTGGATCTCAAACTTAACCAGCT TATTAACAAAAGGAATTCCCTGACTGAACGCCTGACGGAAACTGCCATCAAGGAACAGGAAATCATTCCGCTTATCCGTG AACACAAGGTTAAGGAAGAACTGTACCTGATGCTGTTGAGCAAGGAACAGGAAAACGCCCTGGCCATGGCGGTAACGGAA TCCAATGCCCGGGTACTGGAAACCGCCCATGGCTCCAACCTCCCTATCTCTCCTAAAACCATTAAATACGTCGCCGGAGG AACGGCAGGCGGAGCCCTGCTCAGTATCCTGGCCTTCATGGGAGCGGCCATGTTGAACAATAAGGTCAACAACAAGCATG ACCTCCCCGCTGCAAACAGGCAGCCGGTCATTGCCGAACTGCCTCAAATGAGCAAAAAAGAAAGCAAAAACACCAAGCTT TTCATTCAGGACGAACATTCCGTCATCGCGGAATGCTTCCACATTCTGCGCAATAACGTAGATTCCATGCTCCCCAGGCC GGAACAGGGAGGACACGTCATTCTGGTCACCTCCACCCTCCCCGGAGAAGGGAAAACCTTCACCTCCGCCAATCTGGCCG CCGCTTTCGCCTATGCCGGCAAAAAAGTACTGCTTATTGACGGGGATTTCCGCAAATCCTCCCTGACCCGGCGTCTCGGC GGTTCCGGACGCAAAGGACTCACTTCCATCCTGCTCCAACAGACCACCGACACCACCGGCATCATTCGCCCCCTGGGAGA AAACTCCCGCGGCATGGATATCCTTTACACCGGCCCCATGGTGCCCAATCCGGTCACCCTGCTCAGCCATCCCCTGTTGG GCCATATCCTCGGCATCCTGAAAAAACAGTATGATGCCGTCATCATCGACGCTCCGCCCTACGGCATTCTGGCAGACACC GCCATTCTGGCATCCCTGAGCGATATTACCCTGTACGCCGTGCGCAGCGGAAAAATCGACAAACGGTATCTGCTCCAAAT CCAGCAACTGGCCGATCAGGGAAAACTGCCCAATATGGCGTACATCATCAACGGCGTCAACTTCAAGTCCGCCAGCTACA GCTACTATGGCTATGGCTACGGCTACCAGTATGGCTACGGGACCAAAGAACCGCAGCAAACCAGCAGGAAACAAGATAAA TAA
Upstream 100 bases:
>100_bases AATCATACCTGTGAACGGAAATATAGGGACGGTCCGATTGCATCGGACCGCTTCCCCAGGGGTTCAGTATTTCCACACAA CATTCCACCCTCTTTCCTCC
Downstream 100 bases:
>100_bases GGCGCAGGCCATACATAAGCCCAGGCTTTCTTCCCTGCTTTTTACTCTTTTCGGCAGCAATCATGTTCGGCAACCTGTTC ACCCCCCGGTATGCGACATC
Product: capsular exopolysaccharide family
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: Amylovoran biosynthesis membrane-associated protein AmsA [H]
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MTNNTAPTPPVTENTEETALSLDTVLTILRRYWFIIILAALAGGTAAYYLAGKQNYIYQKTASVLMRDAKTGSDASSERI MAELNIDPNAANLANESLVLKSTALMNKVVEDLSLNTSYWQKKDFRELDLYHATPLLVHFEQIDKQRACTLNITPLDEKR FMLGHPNDQGELILLEGFYGKPLTLPFATISVHPTSLMTDAWNGKTVIVRHSPVLETANALLRGLTITRPDSKESSLLEM TLTSSNPQKAEDTLNHLIQVYNQISKDERNKASLKTKIFIRDRLKELGASLSDVDKKLTEFKTKSDIVKDADTTMSADFS TSQALEKEIFDLETQIKLASTLADNLKESERKHGLISVETGLPDSGIARQIEHYNEAYLEYQKIAGSAGSQNPIAVSLRD RMNSTRAAANKALSNYRSNLDLKLNQLINKRNSLTERLTETAIKEQEIIPLIREHKVKEELYLMLLSKEQENALAMAVTE SNARVLETAHGSNLPISPKTIKYVAGGTAGGALLSILAFMGAAMLNNKVNNKHDLPAANRQPVIAELPQMSKKESKNTKL FIQDEHSVIAECFHILRNNVDSMLPRPEQGGHVILVTSTLPGEGKTFTSANLAAAFAYAGKKVLLIDGDFRKSSLTRRLG GSGRKGLTSILLQQTTDTTGIIRPLGENSRGMDILYTGPMVPNPVTLLSHPLLGHILGILKKQYDAVIIDAPPYGILADT AILASLSDITLYAVRSGKIDKRYLLQIQQLADQGKLPNMAYIINGVNFKSASYSYYGYGYGYQYGYGTKEPQQTSRKQDK
Sequences:
>Translated_800_residues MTNNTAPTPPVTENTEETALSLDTVLTILRRYWFIIILAALAGGTAAYYLAGKQNYIYQKTASVLMRDAKTGSDASSERI MAELNIDPNAANLANESLVLKSTALMNKVVEDLSLNTSYWQKKDFRELDLYHATPLLVHFEQIDKQRACTLNITPLDEKR FMLGHPNDQGELILLEGFYGKPLTLPFATISVHPTSLMTDAWNGKTVIVRHSPVLETANALLRGLTITRPDSKESSLLEM TLTSSNPQKAEDTLNHLIQVYNQISKDERNKASLKTKIFIRDRLKELGASLSDVDKKLTEFKTKSDIVKDADTTMSADFS TSQALEKEIFDLETQIKLASTLADNLKESERKHGLISVETGLPDSGIARQIEHYNEAYLEYQKIAGSAGSQNPIAVSLRD RMNSTRAAANKALSNYRSNLDLKLNQLINKRNSLTERLTETAIKEQEIIPLIREHKVKEELYLMLLSKEQENALAMAVTE SNARVLETAHGSNLPISPKTIKYVAGGTAGGALLSILAFMGAAMLNNKVNNKHDLPAANRQPVIAELPQMSKKESKNTKL FIQDEHSVIAECFHILRNNVDSMLPRPEQGGHVILVTSTLPGEGKTFTSANLAAAFAYAGKKVLLIDGDFRKSSLTRRLG GSGRKGLTSILLQQTTDTTGIIRPLGENSRGMDILYTGPMVPNPVTLLSHPLLGHILGILKKQYDAVIIDAPPYGILADT AILASLSDITLYAVRSGKIDKRYLLQIQQLADQGKLPNMAYIINGVNFKSASYSYYGYGYGYQYGYGTKEPQQTSRKQDK >Mature_799_residues TNNTAPTPPVTENTEETALSLDTVLTILRRYWFIIILAALAGGTAAYYLAGKQNYIYQKTASVLMRDAKTGSDASSERIM AELNIDPNAANLANESLVLKSTALMNKVVEDLSLNTSYWQKKDFRELDLYHATPLLVHFEQIDKQRACTLNITPLDEKRF MLGHPNDQGELILLEGFYGKPLTLPFATISVHPTSLMTDAWNGKTVIVRHSPVLETANALLRGLTITRPDSKESSLLEMT LTSSNPQKAEDTLNHLIQVYNQISKDERNKASLKTKIFIRDRLKELGASLSDVDKKLTEFKTKSDIVKDADTTMSADFST SQALEKEIFDLETQIKLASTLADNLKESERKHGLISVETGLPDSGIARQIEHYNEAYLEYQKIAGSAGSQNPIAVSLRDR MNSTRAAANKALSNYRSNLDLKLNQLINKRNSLTERLTETAIKEQEIIPLIREHKVKEELYLMLLSKEQENALAMAVTES NARVLETAHGSNLPISPKTIKYVAGGTAGGALLSILAFMGAAMLNNKVNNKHDLPAANRQPVIAELPQMSKKESKNTKLF IQDEHSVIAECFHILRNNVDSMLPRPEQGGHVILVTSTLPGEGKTFTSANLAAAFAYAGKKVLLIDGDFRKSSLTRRLGG SGRKGLTSILLQQTTDTTGIIRPLGENSRGMDILYTGPMVPNPVTLLSHPLLGHILGILKKQYDAVIIDAPPYGILADTA ILASLSDITLYAVRSGKIDKRYLLQIQQLADQGKLPNMAYIINGVNFKSASYSYYGYGYGYQYGYGTKEPQQTSRKQDK
Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=387, Percent_Identity=28.4237726098191, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1787216, Length=376, Percent_Identity=27.6595744680851, Blast_Score=113, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 88382; Mature: 88251
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNTAPTPPVTENTEETALSLDTVLTILRRYWFIIILAALAGGTAAYYLAGKQNYIYQK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH TASVLMRDAKTGSDASSERIMAELNIDPNAANLANESLVLKSTALMNKVVEDLSLNTSYW HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHHHHHHCCCCHHH QKKDFRELDLYHATPLLVHFEQIDKQRACTLNITPLDEKRFMLGHPNDQGELILLEGFYG HCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEECCCC KPLTLPFATISVHPTSLMTDAWNGKTVIVRHSPVLETANALLRGLTITRPDSKESSLLEM CCEECEEEEEEECCHHHEECCCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCCCCEEEE TLTSSNPQKAEDTLNHLIQVYNQISKDERNKASLKTKIFIRDRLKELGASLSDVDKKLTE EECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHCCCHHHHHHHHHH FKTKSDIVKDADTTMSADFSTSQALEKEIFDLETQIKLASTLADNLKESERKHGLISVET HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GLPDSGIARQIEHYNEAYLEYQKIAGSAGSQNPIAVSLRDRMNSTRAAANKALSNYRSNL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHCCC DLKLNQLINKRNSLTERLTETAIKEQEIIPLIREHKVKEELYLMLLSKEQENALAMAVTE CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC SNARVLETAHGSNLPISPKTIKYVAGGTAGGALLSILAFMGAAMLNNKVNNKHDLPAANR CCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC QPVIAELPQMSKKESKNTKLFIQDEHSVIAECFHILRNNVDSMLPRPEQGGHVILVTSTL CCHHHHCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEECC PGEGKTFTSANLAAAFAYAGKKVLLIDGDFRKSSLTRRLGGSGRKGLTSILLQQTTDTTG CCCCCEECCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCC IIRPLGENSRGMDILYTGPMVPNPVTLLSHPLLGHILGILKKQYDAVIIDAPPYGILADT EEEECCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHH AILASLSDITLYAVRSGKIDKRYLLQIQQLADQGKLPNMAYIINGVNFKSASYSYYGYGY HHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCC GYQYGYGTKEPQQTSRKQDK CEECCCCCCCHHHHHHCCCC >Mature Secondary Structure TNNTAPTPPVTENTEETALSLDTVLTILRRYWFIIILAALAGGTAAYYLAGKQNYIYQK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH TASVLMRDAKTGSDASSERIMAELNIDPNAANLANESLVLKSTALMNKVVEDLSLNTSYW HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHHHHHHCCCCHHH QKKDFRELDLYHATPLLVHFEQIDKQRACTLNITPLDEKRFMLGHPNDQGELILLEGFYG HCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEECCCC KPLTLPFATISVHPTSLMTDAWNGKTVIVRHSPVLETANALLRGLTITRPDSKESSLLEM CCEECEEEEEEECCHHHEECCCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCCCCEEEE TLTSSNPQKAEDTLNHLIQVYNQISKDERNKASLKTKIFIRDRLKELGASLSDVDKKLTE EECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHCCCHHHHHHHHHH FKTKSDIVKDADTTMSADFSTSQALEKEIFDLETQIKLASTLADNLKESERKHGLISVET HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GLPDSGIARQIEHYNEAYLEYQKIAGSAGSQNPIAVSLRDRMNSTRAAANKALSNYRSNL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHCCC DLKLNQLINKRNSLTERLTETAIKEQEIIPLIREHKVKEELYLMLLSKEQENALAMAVTE CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC SNARVLETAHGSNLPISPKTIKYVAGGTAGGALLSILAFMGAAMLNNKVNNKHDLPAANR CCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC QPVIAELPQMSKKESKNTKLFIQDEHSVIAECFHILRNNVDSMLPRPEQGGHVILVTSTL CCHHHHCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEECC PGEGKTFTSANLAAAFAYAGKKVLLIDGDFRKSSLTRRLGGSGRKGLTSILLQQTTDTTG CCCCCEECCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCC IIRPLGENSRGMDILYTGPMVPNPVTLLSHPLLGHILGILKKQYDAVIIDAPPYGILADT EEEECCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHH AILASLSDITLYAVRSGKIDKRYLLQIQQLADQGKLPNMAYIINGVNFKSASYSYYGYGY HHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCC GYQYGYGTKEPQQTSRKQDK CEECCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]