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The map label for this gene is gfcE [H]

Identifier: 187736555

GI number: 187736555

Start: 2526716

End: 2527498

Strand: Direct

Name: gfcE [H]

Synonym: Amuc_2077

Alternate gene names: 187736555

Gene position: 2526716-2527498 (Clockwise)

Preceding gene: 187736552

Following gene: 187736556

Centisome position: 94.84

GC content: 54.79

Gene sequence:

>783_bases
ATGAATACAAACAACCTCATCAATAAAGCCATTCTGTGCTCCCTGGCCATGGCCGGAGCCGCTCTCCTGCCTTCCTGCGT
CAGCCCCAAGGAAGTCCTCTATATCCAGGATGTTTCCGGAAACTCCAGAGAAACCATCAAGGCAAACTACCAGACAACCA
TCCAGAAGGATGACCAGCTCTATATCGCGGTCAGCAGCAAGCAGCCGGAGCTCACCGCCCCCTTTGCCATGTCTGAAATC
GGTTCCGCCAGCGGCACCTCCAGCAACAAACCCAAAGGATATCTGGTGGATGCCCAGGGCTGCATCGTCCTGCCCGTCAT
CGGCAAAATGAAGGCTGCGGGCAAAACCTGCTCCCAGCTGGCCTCCGACATTGCCGCGACTCTCAAGAGCAATGACTACA
TCCGGGATGCCTCCGTCAATGTTCAGATCATGAACTTCAAATTTTCCGTTCTGGGCGAAGTCAATGCTCCCGGAACCTAC
ACTATTGAAGGCCAGCGCGTAACCATTCTTGAGGCCATCAGCCGGGCCGGAGACCTTAATATTGACGGCAACCGGGACGT
CACGTTAATCAGGGAAACCAACGGAACCCGTCAAATCGCCAGCATCGACCTGCGCAGCAAGGATTTGTTCACTTCTCCTT
ATTATTACATCCAGCAAAACGACATCATTTACGTGACACCCTCAGACCGCAAGGTCAACACGCGCAGCGACGCTGCTCAA
TGGTACGGCTGGGGTCTCTCCGGGCTTGGTGTCACTCTGGCCGTGATCGCCCTGTGCCTGTAA

Upstream 100 bases:

>100_bases
CCGGGGCAAGGAAGAAAATCCTTTGAGCCGGAATGGCCTCTTTCCCTGTTTTTAGCATCATCTTTCCTCCTAAAAGCAAC
GTTTCCTCCTTCCTCACCAA

Downstream 100 bases:

>100_bases
CGGACATTCCGCCTCTTTCTCGTCCGGCTTAATCATACCTGTGAACGGAAATATAGGGACGGTCCGATTGCATCGGACCG
CTTCCCCAGGGGTTCAGTAT

Product: polysaccharide export protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNTNNLINKAILCSLAMAGAALLPSCVSPKEVLYIQDVSGNSRETIKANYQTTIQKDDQLYIAVSSKQPELTAPFAMSEI
GSASGTSSNKPKGYLVDAQGCIVLPVIGKMKAAGKTCSQLASDIAATLKSNDYIRDASVNVQIMNFKFSVLGEVNAPGTY
TIEGQRVTILEAISRAGDLNIDGNRDVTLIRETNGTRQIASIDLRSKDLFTSPYYYIQQNDIIYVTPSDRKVNTRSDAAQ
WYGWGLSGLGVTLAVIALCL

Sequences:

>Translated_260_residues
MNTNNLINKAILCSLAMAGAALLPSCVSPKEVLYIQDVSGNSRETIKANYQTTIQKDDQLYIAVSSKQPELTAPFAMSEI
GSASGTSSNKPKGYLVDAQGCIVLPVIGKMKAAGKTCSQLASDIAATLKSNDYIRDASVNVQIMNFKFSVLGEVNAPGTY
TIEGQRVTILEAISRAGDLNIDGNRDVTLIRETNGTRQIASIDLRSKDLFTSPYYYIQQNDIIYVTPSDRKVNTRSDAAQ
WYGWGLSGLGVTLAVIALCL
>Mature_260_residues
MNTNNLINKAILCSLAMAGAALLPSCVSPKEVLYIQDVSGNSRETIKANYQTTIQKDDQLYIAVSSKQPELTAPFAMSEI
GSASGTSSNKPKGYLVDAQGCIVLPVIGKMKAAGKTCSQLASDIAATLKSNDYIRDASVNVQIMNFKFSVLGEVNAPGTY
TIEGQRVTILEAISRAGDLNIDGNRDVTLIRETNGTRQIASIDLRSKDLFTSPYYYIQQNDIIYVTPSDRKVNTRSDAAQ
WYGWGLSGLGVTLAVIALCL

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=190, Percent_Identity=35.2631578947368, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788376, Length=192, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 28031; Mature: 28031

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNNLINKAILCSLAMAGAALLPSCVSPKEVLYIQDVSGNSRETIKANYQTTIQKDDQL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECEEEEEECCCEE
YIAVSSKQPELTAPFAMSEIGSASGTSSNKPKGYLVDAQGCIVLPVIGKMKAAGKTCSQL
EEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHCCHHHHHH
ASDIAATLKSNDYIRDASVNVQIMNFKFSVLGEVNAPGTYTIEGQRVTILEAISRAGDLN
HHHHHHHHCCCCEEEECEEEEEEEEEEEEEEECCCCCCEEEECCCEEHHHHHHHHCCCCC
IDGNRDVTLIRETNGTRQIASIDLRSKDLFTSPYYYIQQNDIIYVTPSDRKVNTRSDAAQ
CCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCEECCCCCHHH
WYGWGLSGLGVTLAVIALCL
HHCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNTNNLINKAILCSLAMAGAALLPSCVSPKEVLYIQDVSGNSRETIKANYQTTIQKDDQL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECEEEEEECCCEE
YIAVSSKQPELTAPFAMSEIGSASGTSSNKPKGYLVDAQGCIVLPVIGKMKAAGKTCSQL
EEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHCCHHHHHH
ASDIAATLKSNDYIRDASVNVQIMNFKFSVLGEVNAPGTYTIEGQRVTILEAISRAGDLN
HHHHHHHHCCCCEEEECEEEEEEEEEEEEEEECCCCCCEEEECCCEEHHHHHHHHCCCCC
IDGNRDVTLIRETNGTRQIASIDLRSKDLFTSPYYYIQQNDIIYVTPSDRKVNTRSDAAQ
CCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCEECCCCCHHH
WYGWGLSGLGVTLAVIALCL
HHCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]