Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is cls [H]
Identifier: 187736512
GI number: 187736512
Start: 2468259
End: 2469713
Strand: Direct
Name: cls [H]
Synonym: Amuc_2033
Alternate gene names: 187736512
Gene position: 2468259-2469713 (Clockwise)
Preceding gene: 187736509
Following gene: 187736513
Centisome position: 92.65
GC content: 57.94
Gene sequence:
>1455_bases ATGATCATTCCTGAAGAGCCATATTTGGGATTTGCCGCCTTTTGCCACATTGCAGGCGCCTTCTGCCTGATTCCGGCCCT GCTCCATACGCGCACGCCTCAGGGAACAATCGCGTGGCTCATTTCCCTGCTGGCATTTCCATATATTGCCGTCCCCTTTT ACCTGATCCTGGGACGCCGGAGATTCAGCGGATATGTGGAAACGCGCCGCCGCCAGACGGACCCCGAATCCGCATGGGGG GAACTGACGGATAAAATTACAAACTGCATGGTTCCGTATGCCGTACAGTCATCCGACACGGCGGGAAAAATCATGCACAC GCTTTCCAATATCGTGCGGCTGCCCGTCTGCCGCGGCAATTCCTGCCGCCTGCTTATTGACGCGGCCAACGCTTTCCCGC GCATCTACGACGCCATCAAGAACGCAGAGCATTACATCCTGATTGAATTCTTCATCATCAAAAACGACTCCGTGGGGCAG AACCTGAAGGACCTGCTGATTGAACGGGCCAAGGCCGGCATCCGCATTTACATGCTGTATGATGAAATCGGCTCCCACAA GCTCCCCCCCGGTTACATTTCCGCCCTGCGGAAAGCAGGAGTGAACATTGAACCTTTCAACGGGAAGCGCCATTTCCTGA GCAACATCCTGCGGCTGAACTTCCGCAACCACCGGAAACTGGTGGTGGTGGACGGTTCCACCGCCTTCATCGGAGGCATG AATATAGGCAGGGAATACCTGGGCAAGGGAGCTCTGGGCTACTGGCGCGACACGTTTGTCCAGCTTGAAGGCCCCTCCGT CCAGCAAACGCAAATCAGCTTTCTGGAAGACTGGAACTGGGCCATGCTGAAATGCGGCCCCTCCTCCCTTCCCCGCCTCC GCTGGGAAATCACGCCCCAGCCGGAGGATGAAACCCTGCTCATCCTGCCCTCCGGCCCCGCAGACGTCATTCCCGCCTGG AAAACCGCGCTCATCGCCCTGGCGAACAGCGCCACCCGGCGGCTCTGGATATCCACCCCCTACTTCGTCCCGGACGAGGG AGTCATGGCCGCCCTGCAGGCGGCGGCCCTGCGGAACGTGGATGTGCGCATCCTGCGTCCGGAGCGGGCAGACCATATTC TGGTGAAACTGTCCTCCTTTACTTTCCTTCGGGACCTGGACACATACGGCATCCAGCTCTGGGCCTATCAAAAGGGGTTC CTGCATCAGAAAGTAGTTCTGATGGACGATGACATAGCCACCGTGGGAACCGCCAATCTGGACAACCGTTCCCTGGCCCT GAACTTTGAAATCACCGCCGTTATCCATTCCCCCTCCGCCTGCGCGGAGGTAAAAGCCATGCTGGAGCAGGATTTTTCCT CCTCCAAGAGGGAATCCCTGGCGGATTACAACAATAAATCCCTGGGCTTCAAAATGCTCTGCAACCTGGCGCGACTGACG GCCCCCGTCCAGTAG
Upstream 100 bases:
>100_bases GAGCATGCGTCACCTTAGTATCATCTCCTGCTCCAAAAGCCAGCCTTTTCACTTCTCCCCGCCGTTTTCATCCCCCGCAT CTTTTCCGGTTTTCCGTTCC
Downstream 100 bases:
>100_bases TTCTTCCGGCGAATCCGCTGTTGTATGCTTGACCTGCAAGGGAGGCTGTGAGAAAATCACCCTCCAGAAGCCACCTCTTC AATTTTTAACAACAGTTAAC
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MIIPEEPYLGFAAFCHIAGAFCLIPALLHTRTPQGTIAWLISLLAFPYIAVPFYLILGRRRFSGYVETRRRQTDPESAWG ELTDKITNCMVPYAVQSSDTAGKIMHTLSNIVRLPVCRGNSCRLLIDAANAFPRIYDAIKNAEHYILIEFFIIKNDSVGQ NLKDLLIERAKAGIRIYMLYDEIGSHKLPPGYISALRKAGVNIEPFNGKRHFLSNILRLNFRNHRKLVVVDGSTAFIGGM NIGREYLGKGALGYWRDTFVQLEGPSVQQTQISFLEDWNWAMLKCGPSSLPRLRWEITPQPEDETLLILPSGPADVIPAW KTALIALANSATRRLWISTPYFVPDEGVMAALQAAALRNVDVRILRPERADHILVKLSSFTFLRDLDTYGIQLWAYQKGF LHQKVVLMDDDIATVGTANLDNRSLALNFEITAVIHSPSACAEVKAMLEQDFSSSKRESLADYNNKSLGFKMLCNLARLT APVQ
Sequences:
>Translated_484_residues MIIPEEPYLGFAAFCHIAGAFCLIPALLHTRTPQGTIAWLISLLAFPYIAVPFYLILGRRRFSGYVETRRRQTDPESAWG ELTDKITNCMVPYAVQSSDTAGKIMHTLSNIVRLPVCRGNSCRLLIDAANAFPRIYDAIKNAEHYILIEFFIIKNDSVGQ NLKDLLIERAKAGIRIYMLYDEIGSHKLPPGYISALRKAGVNIEPFNGKRHFLSNILRLNFRNHRKLVVVDGSTAFIGGM NIGREYLGKGALGYWRDTFVQLEGPSVQQTQISFLEDWNWAMLKCGPSSLPRLRWEITPQPEDETLLILPSGPADVIPAW KTALIALANSATRRLWISTPYFVPDEGVMAALQAAALRNVDVRILRPERADHILVKLSSFTFLRDLDTYGIQLWAYQKGF LHQKVVLMDDDIATVGTANLDNRSLALNFEITAVIHSPSACAEVKAMLEQDFSSSKRESLADYNNKSLGFKMLCNLARLT APVQ >Mature_484_residues MIIPEEPYLGFAAFCHIAGAFCLIPALLHTRTPQGTIAWLISLLAFPYIAVPFYLILGRRRFSGYVETRRRQTDPESAWG ELTDKITNCMVPYAVQSSDTAGKIMHTLSNIVRLPVCRGNSCRLLIDAANAFPRIYDAIKNAEHYILIEFFIIKNDSVGQ NLKDLLIERAKAGIRIYMLYDEIGSHKLPPGYISALRKAGVNIEPFNGKRHFLSNILRLNFRNHRKLVVVDGSTAFIGGM NIGREYLGKGALGYWRDTFVQLEGPSVQQTQISFLEDWNWAMLKCGPSSLPRLRWEITPQPEDETLLILPSGPADVIPAW KTALIALANSATRRLWISTPYFVPDEGVMAALQAAALRNVDVRILRPERADHILVKLSSFTFLRDLDTYGIQLWAYQKGF LHQKVVLMDDDIATVGTANLDNRSLALNFEITAVIHSPSACAEVKAMLEQDFSSSKRESLADYNNKSLGFKMLCNLARLT APVQ
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=440, Percent_Identity=28.6363636363636, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1787007, Length=329, Percent_Identity=30.3951367781155, Blast_Score=139, Evalue=6e-34, Organism=Escherichia coli, GI87081826, Length=180, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 54290; Mature: 54290
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPEEPYLGFAAFCHIAGAFCLIPALLHTRTPQGTIAWLISLLAFPYIAVPFYLILGRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH RFSGYVETRRRQTDPESAWGELTDKITNCMVPYAVQSSDTAGKIMHTLSNIVRLPVCRGN HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCC SCRLLIDAANAFPRIYDAIKNAEHYILIEFFIIKNDSVGQNLKDLLIERAKAGIRIYMLY CCEEEEECCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEE DEIGSHKLPPGYISALRKAGVNIEPFNGKRHFLSNILRLNFRNHRKLVVVDGSTAFIGGM ECCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEECC NIGREYLGKGALGYWRDTFVQLEGPSVQQTQISFLEDWNWAMLKCGPSSLPRLRWEITPQ HHCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEECCC PEDETLLILPSGPADVIPAWKTALIALANSATRRLWISTPYFVPDEGVMAALQAAALRNV CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC DVRILRPERADHILVKLSSFTFLRDLDTYGIQLWAYQKGFLHQKVVLMDDDIATVGTANL CEEEECCCCCCEEEEEEECHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCC DNRSLALNFEITAVIHSPSACAEVKAMLEQDFSSSKRESLADYNNKSLGFKMLCNLARLT CCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHC APVQ CCCC >Mature Secondary Structure MIIPEEPYLGFAAFCHIAGAFCLIPALLHTRTPQGTIAWLISLLAFPYIAVPFYLILGRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH RFSGYVETRRRQTDPESAWGELTDKITNCMVPYAVQSSDTAGKIMHTLSNIVRLPVCRGN HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCC SCRLLIDAANAFPRIYDAIKNAEHYILIEFFIIKNDSVGQNLKDLLIERAKAGIRIYMLY CCEEEEECCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEE DEIGSHKLPPGYISALRKAGVNIEPFNGKRHFLSNILRLNFRNHRKLVVVDGSTAFIGGM ECCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEECC NIGREYLGKGALGYWRDTFVQLEGPSVQQTQISFLEDWNWAMLKCGPSSLPRLRWEITPQ HHCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEECCC PEDETLLILPSGPADVIPAWKTALIALANSATRRLWISTPYFVPDEGVMAALQAAALRNV CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC DVRILRPERADHILVKLSSFTFLRDLDTYGIQLWAYQKGFLHQKVVLMDDDIATVGTANL CEEEECCCCCCEEEEEEECHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCC DNRSLALNFEITAVIHSPSACAEVKAMLEQDFSSSKRESLADYNNKSLGFKMLCNLARLT CCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHC APVQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]