Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is thiE [H]
Identifier: 187736494
GI number: 187736494
Start: 2447996
End: 2448610
Strand: Direct
Name: thiE [H]
Synonym: Amuc_2015
Alternate gene names: 187736494
Gene position: 2447996-2448610 (Clockwise)
Preceding gene: 187736493
Following gene: 187736495
Centisome position: 91.89
GC content: 60.98
Gene sequence:
>615_bases ATGAAAAAATTCAATCTCCATCTCTACCTGGTTACGGATGAAGCATCCAAATGCCGCCTCAGCCTTCTGGAAACCGTACG GAAAGCGGCGGACGGAGGAGTTACCATCGTGCAGTACCGCTCCACCAATCCGGATGCGGGAACCTGTTACCGGGAAGCTT TGCCCATACGGGATTTCCTGGCTTCCCGCGGTATTCCCTTCATCGTCAACAACCGCATTGACCTGGCTCTGGCGCTGGAA GCAGACGGCGTCCACATCGGCCAGAGGGATCTTCCGGTTCCATCCGTCAGAGCCATGATCGGCCCGGATAAAATCCTGGG ACTGTCCGTCTCCAATAAGGAACAGCTCCGCGCCGTGGATGCCTCCCTGGTGGACTACCTGGGCATGGGCCCCGTCTTCC CCACCATTTCCAAGCTGAACGCGCCTCCCGTGCTGGGCGTGGAAGGCTTCGCCGCTCTGGCTTCCCAATCTCCCCTGCCC GTTGTCGCCATCGGCGGACTGGACGCGGAACGGGCCCGTCAAGTGCGCGCCACGGGAACCGCCTCCGGAATTGCCGTTGT CTCCGCCATTTGCGGAGCGGAGAATCCGGAAACCGCCGCACGGGCTCTTGCCTGA
Upstream 100 bases:
>100_bases GGAGAATGAAGGAAAGACCATCGTCGTCCTGCTGCCGGACACGGGGGACCGCTATCTTTCCACCCCTCTGTTTACGGACT GATTCCTTCCATTCCCTGCC
Downstream 100 bases:
>100_bases CGGACGTACCGCAGGAAATACCGGACAATCAAGCACTTTTTTACGCCATGCTTTCATCGACAGACCTTGTTCAAGCCGTT ACCGCCGATTTGGGAAAAAT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKKFNLHLYLVTDEASKCRLSLLETVRKAADGGVTIVQYRSTNPDAGTCYREALPIRDFLASRGIPFIVNNRIDLALALE ADGVHIGQRDLPVPSVRAMIGPDKILGLSVSNKEQLRAVDASLVDYLGMGPVFPTISKLNAPPVLGVEGFAALASQSPLP VVAIGGLDAERARQVRATGTASGIAVVSAICGAENPETAARALA
Sequences:
>Translated_204_residues MKKFNLHLYLVTDEASKCRLSLLETVRKAADGGVTIVQYRSTNPDAGTCYREALPIRDFLASRGIPFIVNNRIDLALALE ADGVHIGQRDLPVPSVRAMIGPDKILGLSVSNKEQLRAVDASLVDYLGMGPVFPTISKLNAPPVLGVEGFAALASQSPLP VVAIGGLDAERARQVRATGTASGIAVVSAICGAENPETAARALA >Mature_204_residues MKKFNLHLYLVTDEASKCRLSLLETVRKAADGGVTIVQYRSTNPDAGTCYREALPIRDFLASRGIPFIVNNRIDLALALE ADGVHIGQRDLPVPSVRAMIGPDKILGLSVSNKEQLRAVDASLVDYLGMGPVFPTISKLNAPPVLGVEGFAALASQSPLP VVAIGGLDAERARQVRATGTASGIAVVSAICGAENPETAARALA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=138, Percent_Identity=35.5072463768116, Blast_Score=64, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6325042, Length=220, Percent_Identity=35, Blast_Score=114, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 21444; Mature: 21444
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFNLHLYLVTDEASKCRLSLLETVRKAADGGVTIVQYRSTNPDAGTCYREALPIRDFL CCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCHHHHH ASRGIPFIVNNRIDLALALEADGVHIGQRDLPVPSVRAMIGPDKILGLSVSNKEQLRAVD HHCCCCEEECCCEEEEEEEECCCEEECCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHH ASLVDYLGMGPVFPTISKLNAPPVLGVEGFAALASQSPLPVVAIGGLDAERARQVRATGT HHHHHHHCCCCCCCHHHHCCCCCEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC ASGIAVVSAICGAENPETAARALA CHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MKKFNLHLYLVTDEASKCRLSLLETVRKAADGGVTIVQYRSTNPDAGTCYREALPIRDFL CCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCHHHHH ASRGIPFIVNNRIDLALALEADGVHIGQRDLPVPSVRAMIGPDKILGLSVSNKEQLRAVD HHCCCCEEECCCEEEEEEEECCCEEECCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHH ASLVDYLGMGPVFPTISKLNAPPVLGVEGFAALASQSPLPVVAIGGLDAERARQVRATGT HHHHHHHCCCCCCCHHHHCCCCCEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC ASGIAVVSAICGAENPETAARALA CHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA