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The map label for this gene is intD [C]

Identifier: 187736485

GI number: 187736485

Start: 2437064

End: 2438134

Strand: Direct

Name: intD [C]

Synonym: Amuc_2006

Alternate gene names: 187736485

Gene position: 2437064-2438134 (Clockwise)

Preceding gene: 187736483

Following gene: 187736490

Centisome position: 91.48

GC content: 58.73

Gene sequence:

>1071_bases
ATGAACATACCTACTTCCTCTTTCCCAACTGACGCAGACCAGGCCGGAATCTTCCTCATCCGTTCCCTGGGCATTCCGCC
CATGGACGCTTTCCTTCTTTTAAAGGATCTCCTGGACACCAGCCGCGGAAGAGGCGACAGAATAACCCGGGCCAAACGCT
GCATACGGCTGGGAGGAGAGGCTCTTGCCGACAGGGAAAAAAGCGTATCGTTTTCCCAGGCTGTCCGCGCCAGCCTGGAA
GCAAGGAAACACCGCCGTCCCCGCACGCTGCAGGAAATCCGCTATATGGCCGCCCGGATGATGAAAAAATGCCCGGAGCT
GGCAAGGAAACAGGTCCGTTCCATCACTCCGGAAGATTGCGGGCGTTATCTCCGCAAAAGCTTTCCCACTCCCCGCCAGC
GGCACAAGGGGCGGCTGATCCTGAGCGGCATCCTGAATTATTCCCTGAAGCGCGGATGGTGCCGCAGAAACGCGGCCTTT
CTGGTTCCTCCCCCCATCCTCAGGGAAAAACGCATCAGGGCCCTTTCCCTGTACGAGGCAAAGCGGCTTCTCCACACTGC
GGAACAGTTGTTCCGAGGGGAATGCCTGCCGGCCTGCGCCCTGATGCTGTACGCGGGTATACGCCCCCACGAGGTCAAAA
GGCTGACGTGGAAGCATATCAATCTGAAATCCGGCCTGGTTTCACTGGCGCCCACCCATACCAAAACGGGAGGGAGCCGC
CATGTTTCCATCCTTCCCGTGCTGGGTTCCATCCTCAGCCGGATGTCTTCCGCCGGTTCCCCCGCCCGTTCCGTCTGCCC
GCCCAACTGGGAAAAGAAATGGAAGGAAGTAAGGCGCCGGTCCGGCATCCTGAAGAAAAGCGGATGGGTTCAGGACGTGC
TGAGGCATACCTACGCCTCCTACCACCTGGCCCATTTCTGCAATCAAAACCTTCTCCAGAAGGAGATGGGACACTCCTCC
CCCTCCCTGCTGCTGGCCCGCTATCTTAATATGGAGGGCATCACCTCCGCAACCGGCGCCATGTTCTGGACGCACAGCTT
TGTTTCTCCCGCTCCGTTAAAGGAAGACTGA

Upstream 100 bases:

>100_bases
ACTTCCATCTCCTCTCTCGTTCTTGTTTGATTTTTATAGCTGTTATCAGCACATTTTAGACTTGTGTACGGATTGGGAAT
CCTCTGTTACAACGTTCTTC

Downstream 100 bases:

>100_bases
CAAAAATCCGTCTGGAATTGCGCGGCCAAAGGCGGAGCAATCCCCTGCGCCATCAGACCGGAGGCGCATTTGTTTTGCCT
TGAATCCAAAATAAGGCACA

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MNIPTSSFPTDADQAGIFLIRSLGIPPMDAFLLLKDLLDTSRGRGDRITRAKRCIRLGGEALADREKSVSFSQAVRASLE
ARKHRRPRTLQEIRYMAARMMKKCPELARKQVRSITPEDCGRYLRKSFPTPRQRHKGRLILSGILNYSLKRGWCRRNAAF
LVPPPILREKRIRALSLYEAKRLLHTAEQLFRGECLPACALMLYAGIRPHEVKRLTWKHINLKSGLVSLAPTHTKTGGSR
HVSILPVLGSILSRMSSAGSPARSVCPPNWEKKWKEVRRRSGILKKSGWVQDVLRHTYASYHLAHFCNQNLLQKEMGHSS
PSLLLARYLNMEGITSATGAMFWTHSFVSPAPLKED

Sequences:

>Translated_356_residues
MNIPTSSFPTDADQAGIFLIRSLGIPPMDAFLLLKDLLDTSRGRGDRITRAKRCIRLGGEALADREKSVSFSQAVRASLE
ARKHRRPRTLQEIRYMAARMMKKCPELARKQVRSITPEDCGRYLRKSFPTPRQRHKGRLILSGILNYSLKRGWCRRNAAF
LVPPPILREKRIRALSLYEAKRLLHTAEQLFRGECLPACALMLYAGIRPHEVKRLTWKHINLKSGLVSLAPTHTKTGGSR
HVSILPVLGSILSRMSSAGSPARSVCPPNWEKKWKEVRRRSGILKKSGWVQDVLRHTYASYHLAHFCNQNLLQKEMGHSS
PSLLLARYLNMEGITSATGAMFWTHSFVSPAPLKED
>Mature_356_residues
MNIPTSSFPTDADQAGIFLIRSLGIPPMDAFLLLKDLLDTSRGRGDRITRAKRCIRLGGEALADREKSVSFSQAVRASLE
ARKHRRPRTLQEIRYMAARMMKKCPELARKQVRSITPEDCGRYLRKSFPTPRQRHKGRLILSGILNYSLKRGWCRRNAAF
LVPPPILREKRIRALSLYEAKRLLHTAEQLFRGECLPACALMLYAGIRPHEVKRLTWKHINLKSGLVSLAPTHTKTGGSR
HVSILPVLGSILSRMSSAGSPARSVCPPNWEKKWKEVRRRSGILKKSGWVQDVLRHTYASYHLAHFCNQNLLQKEMGHSS
PSLLLARYLNMEGITSATGAMFWTHSFVSPAPLKED

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40336; Mature: 40336

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPTSSFPTDADQAGIFLIRSLGIPPMDAFLLLKDLLDTSRGRGDRITRAKRCIRLGGE
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
ALADREKSVSFSQAVRASLEARKHRRPRTLQEIRYMAARMMKKCPELARKQVRSITPEDC
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GRYLRKSFPTPRQRHKGRLILSGILNYSLKRGWCRRNAAFLVPPPILREKRIRALSLYEA
HHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHH
KRLLHTAEQLFRGECLPACALMLYAGIRPHEVKRLTWKHINLKSGLVSLAPTHTKTGGSR
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCHHHCCCCCCCCCCC
HVSILPVLGSILSRMSSAGSPARSVCPPNWEKKWKEVRRRSGILKKSGWVQDVLRHTYAS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH
YHLAHFCNQNLLQKEMGHSSPSLLLARYLNMEGITSATGAMFWTHSFVSPAPLKED
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNIPTSSFPTDADQAGIFLIRSLGIPPMDAFLLLKDLLDTSRGRGDRITRAKRCIRLGGE
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
ALADREKSVSFSQAVRASLEARKHRRPRTLQEIRYMAARMMKKCPELARKQVRSITPEDC
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GRYLRKSFPTPRQRHKGRLILSGILNYSLKRGWCRRNAAFLVPPPILREKRIRALSLYEA
HHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHH
KRLLHTAEQLFRGECLPACALMLYAGIRPHEVKRLTWKHINLKSGLVSLAPTHTKTGGSR
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCHHHCCCCCCCCCCC
HVSILPVLGSILSRMSSAGSPARSVCPPNWEKKWKEVRRRSGILKKSGWVQDVLRHTYAS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH
YHLAHFCNQNLLQKEMGHSSPSLLLARYLNMEGITSATGAMFWTHSFVSPAPLKED
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA