Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736465
Identifier: 187736465
GI number: 187736465
Start: 2410617
End: 2413163
Strand: Direct
Name: 187736465
Synonym: Amuc_1985
Alternate gene names: NA
Gene position: 2410617-2413163 (Clockwise)
Preceding gene: 187736455
Following gene: 187736466
Centisome position: 90.49
GC content: 60.38
Gene sequence:
>2547_bases ATGCTGGAAGCCGTATGCCTTGCAGGCATTGCCGTCATTCTTTCCTACGCGCTCCTGTACCTTTCCGACAGATTGTGGGA GACGCCCCCCGCCGTCGGCTGGCTCCTGTTTTTCATCGCCGTGTCCGGCCTGGCGGTGTTTATTCCCTGGTGGAGTTTCC GGTGGGTGTGGCAGAGGCGCACGGAATCCCAGCTGGCGCGGCTGATTTCCCGGACGGACGCGGCCCTGGGGGATCGTCTC CTGGGCGTCATCGAACTGGATTCCGAAAAGCACGGCCGCCAATACGGTTCCGAAAAACTGAAAGAGGCGGCCATGGAGCA GGTGGCCCGCGAAGTGTCCGCCCGGGACCTGACGGCTAACATCCCCCGGCCCAGCCACAGAAAGCTGTTCGTCCTGCTGA CGGTTCTCGCCGCATGCACGGCGGCCGTATGTGCGGTAAGCCCGGAAGCGGCAGGGAATGCCCTGAAACGCTGGGTCCGC CCGTTCAATCCTCCGGAACGCTATACGTTCACCCAGCTGGCCCCCACCCCGGATTCCCTGGTCATTCCCCTGGGAGAGAG CTGCCTGTATGAGATCCGGCTGGCGGAGGGAACCAAAACCCGCCCGCAGACGGCAGAGTATTTTTTCCGCAACAGGGTGA GCCAGCAGGCGCCTCTTGCGGACGGCACATACAAGATCCACATCCCCCCCATGCAACAGGCGGACAACCTGGAGTTTTTT GCAGGGGATGCCGTGCGACGGCTGAACATCATCCCGAAGGGGCGCCCTTCCCTGCTGGGGGCCGAAGCCGGCGTGGCCTA TCCTGCCTATATGGCGCGCGCCAACGGCAGGGAAGCCATGAGAGCAGGAGTTATTTCCGCCCCGGAAGGCTCTACGCTGA CGTTGAAGGTGTCCGCCTCCCAGCGCCTGCAGTCTGCGGAGGACGCGCAGGGCCAGCCGCTCCGGGTGGACGGAAGCAGC GTCATCATTCCGAACATCCTTTTGGAGAAAGAGCCCAGGGAAATAGAGCTTGACTGGATGGACAGCGACGGGCTGGCTGC TTCCCGGCCCGTGAAGATACGACTGGAACCCATTGAAGACAAACAGCCTTCAATTTACCTGAGAGGCGGCGAAAACGACC GCTACGTGCTGGAGGATACCAGCATTGAACTGGAGGTAGAGGCGGCGGACGATTTCGGCCTCCGGGAAATGGGGGTGGAA TGGCAGGGTGAAAAATCCTTTTACGACGGCAATGAGGGTGAAAACGGGGCCTCAGCTCCAAAACCGGCCGGTGCGGACAA ACCGGCGCCCGGCCTCCGCGGGGAGAAAGTGCTGGCGGACGGACAGCCCACGCAGACCGGGCTGAAAGGAACATTCCTGT TCCAGGCCAGGGCGCTGAAGTTATCTCCCCAGCGCGTCGTCATCCGCGGGTTTACGCAGGATTACAAACCGGGAGGCAGG CGCGTTTATTCGGAACCCATGATTATTTTCGTCCTTTCCAAGTCCGAGCACGCCCAGATGATCCGCAATGAACTGGAACG CATCACCAGCGAGCTGGAAGGCATGATCCGCCGCATGGACGCCATGGCGGACGAGGCAAAACGGCTGAAAGGAATGGAAA GCGGCAAATTGAAAGATGCGGAGTCCCAGGAACGCCTGCACGCCCTGGCCGATGAAGAGCAGGCCAACAGGCGCGAGTTG GGAGACTTGCTCAACCGCTCGGAAAGCCTGTTTAAGGAAGCCTCCCGCAATTCCCAGATAGACCCGGCCGGCATGAAGGA ATTCATGAAAGGAATTTCCATGCTCAAACCCATTCCCGACGGGCCCATGAAGATGGCCCAGAAGCAGTTCCGGGATTCCG CCTCCGAGAGCCGCTCCGAGCAGGAAAGCAGGAAGGACCTGAACGACGGGGAGAATTCCCATTCCGAAGCCACACAGGCG CTGAAAGACACCATGAACCAGCTCTCCAAGTCCGCGCAGGACATGGAGGCCAGCACATTCGTGGCACGGCTCAGGCAGGC CGCATCCAAGGAGGATTCCATCGCCCATGCACTGGCCGGCCAGATCAACACCATTGCGGGCATGACCATGGAGGAGCTTG ACCCTTCCACCAGGCGTGAAATGGAAACCATCGCCACCCTTCAAAACGCCTCCACGCAGGACATAGGCTGGATTCTGGAA GACCTCAGCTATTACAAGTCACGCACCGGGGAGCGCATTTACAGCGACCTGTACAACCAGATGAACGCTTTCTCCCTCCG GGATAAGCTGGACCTGGTGCACGGCAATATCCTGAACGCAATCACGGCCCGCTCCATTGACGAGTCCCGCCTGTATGCCT CCACCCTGCGCCATTGGGCCAAATTGATAGACGACTATAAGAAGAGCCGCCGCGGCGGCGGGGGAGGAGGAGGCGGCGGG GGAGGCAGCCAGTCCTCCATTTCCGATGCCGAGTTTGAATTCATGCTGAAACTCATCCGCATGATCCAACAGGAACAGGA TATCCGCATGCGCACCCGCGCCGCCGAACAGGAACACCGCAAAAAATTTACCCTACCTGCCCCATGA
Upstream 100 bases:
>100_bases AAATACGGGAATAAGCATGCCCCCTTCTACTACCGTCAAACTCCCTCCCCAGCTGGTCCGGCAGCTCCGAACTTTCCGGC GCCGCCTCAGAACGGCGAAG
Downstream 100 bases:
>100_bases ATACCGCCAATTTCCCAGCCATGATTCTGGCACTTTCCCTGCCCTGCGCCGCCGCTCCGGCCCCTGCTCCGGAATATTCC GCCAAGCACAAGGAAACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MLEAVCLAGIAVILSYALLYLSDRLWETPPAVGWLLFFIAVSGLAVFIPWWSFRWVWQRRTESQLARLISRTDAALGDRL LGVIELDSEKHGRQYGSEKLKEAAMEQVAREVSARDLTANIPRPSHRKLFVLLTVLAACTAAVCAVSPEAAGNALKRWVR PFNPPERYTFTQLAPTPDSLVIPLGESCLYEIRLAEGTKTRPQTAEYFFRNRVSQQAPLADGTYKIHIPPMQQADNLEFF AGDAVRRLNIIPKGRPSLLGAEAGVAYPAYMARANGREAMRAGVISAPEGSTLTLKVSASQRLQSAEDAQGQPLRVDGSS VIIPNILLEKEPREIELDWMDSDGLAASRPVKIRLEPIEDKQPSIYLRGGENDRYVLEDTSIELEVEAADDFGLREMGVE WQGEKSFYDGNEGENGASAPKPAGADKPAPGLRGEKVLADGQPTQTGLKGTFLFQARALKLSPQRVVIRGFTQDYKPGGR RVYSEPMIIFVLSKSEHAQMIRNELERITSELEGMIRRMDAMADEAKRLKGMESGKLKDAESQERLHALADEEQANRREL GDLLNRSESLFKEASRNSQIDPAGMKEFMKGISMLKPIPDGPMKMAQKQFRDSASESRSEQESRKDLNDGENSHSEATQA LKDTMNQLSKSAQDMEASTFVARLRQAASKEDSIAHALAGQINTIAGMTMEELDPSTRREMETIATLQNASTQDIGWILE DLSYYKSRTGERIYSDLYNQMNAFSLRDKLDLVHGNILNAITARSIDESRLYASTLRHWAKLIDDYKKSRRGGGGGGGGG GGSQSSISDAEFEFMLKLIRMIQQEQDIRMRTRAAEQEHRKKFTLPAP
Sequences:
>Translated_848_residues MLEAVCLAGIAVILSYALLYLSDRLWETPPAVGWLLFFIAVSGLAVFIPWWSFRWVWQRRTESQLARLISRTDAALGDRL LGVIELDSEKHGRQYGSEKLKEAAMEQVAREVSARDLTANIPRPSHRKLFVLLTVLAACTAAVCAVSPEAAGNALKRWVR PFNPPERYTFTQLAPTPDSLVIPLGESCLYEIRLAEGTKTRPQTAEYFFRNRVSQQAPLADGTYKIHIPPMQQADNLEFF AGDAVRRLNIIPKGRPSLLGAEAGVAYPAYMARANGREAMRAGVISAPEGSTLTLKVSASQRLQSAEDAQGQPLRVDGSS VIIPNILLEKEPREIELDWMDSDGLAASRPVKIRLEPIEDKQPSIYLRGGENDRYVLEDTSIELEVEAADDFGLREMGVE WQGEKSFYDGNEGENGASAPKPAGADKPAPGLRGEKVLADGQPTQTGLKGTFLFQARALKLSPQRVVIRGFTQDYKPGGR RVYSEPMIIFVLSKSEHAQMIRNELERITSELEGMIRRMDAMADEAKRLKGMESGKLKDAESQERLHALADEEQANRREL GDLLNRSESLFKEASRNSQIDPAGMKEFMKGISMLKPIPDGPMKMAQKQFRDSASESRSEQESRKDLNDGENSHSEATQA LKDTMNQLSKSAQDMEASTFVARLRQAASKEDSIAHALAGQINTIAGMTMEELDPSTRREMETIATLQNASTQDIGWILE DLSYYKSRTGERIYSDLYNQMNAFSLRDKLDLVHGNILNAITARSIDESRLYASTLRHWAKLIDDYKKSRRGGGGGGGGG GGSQSSISDAEFEFMLKLIRMIQQEQDIRMRTRAAEQEHRKKFTLPAP >Mature_848_residues MLEAVCLAGIAVILSYALLYLSDRLWETPPAVGWLLFFIAVSGLAVFIPWWSFRWVWQRRTESQLARLISRTDAALGDRL LGVIELDSEKHGRQYGSEKLKEAAMEQVAREVSARDLTANIPRPSHRKLFVLLTVLAACTAAVCAVSPEAAGNALKRWVR PFNPPERYTFTQLAPTPDSLVIPLGESCLYEIRLAEGTKTRPQTAEYFFRNRVSQQAPLADGTYKIHIPPMQQADNLEFF AGDAVRRLNIIPKGRPSLLGAEAGVAYPAYMARANGREAMRAGVISAPEGSTLTLKVSASQRLQSAEDAQGQPLRVDGSS VIIPNILLEKEPREIELDWMDSDGLAASRPVKIRLEPIEDKQPSIYLRGGENDRYVLEDTSIELEVEAADDFGLREMGVE WQGEKSFYDGNEGENGASAPKPAGADKPAPGLRGEKVLADGQPTQTGLKGTFLFQARALKLSPQRVVIRGFTQDYKPGGR RVYSEPMIIFVLSKSEHAQMIRNELERITSELEGMIRRMDAMADEAKRLKGMESGKLKDAESQERLHALADEEQANRREL GDLLNRSESLFKEASRNSQIDPAGMKEFMKGISMLKPIPDGPMKMAQKQFRDSASESRSEQESRKDLNDGENSHSEATQA LKDTMNQLSKSAQDMEASTFVARLRQAASKEDSIAHALAGQINTIAGMTMEELDPSTRREMETIATLQNASTQDIGWILE DLSYYKSRTGERIYSDLYNQMNAFSLRDKLDLVHGNILNAITARSIDESRLYASTLRHWAKLIDDYKKSRRGGGGGGGGG GGSQSSISDAEFEFMLKLIRMIQQEQDIRMRTRAAEQEHRKKFTLPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94307; Mature: 94307
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAVCLAGIAVILSYALLYLSDRLWETPPAVGWLLFFIAVSGLAVFIPWWSFRWVWQRR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHH TESQLARLISRTDAALGDRLLGVIELDSEKHGRQYGSEKLKEAAMEQVAREVSARDLTAN HHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPRPSHRKLFVLLTVLAACTAAVCAVSPEAAGNALKRWVRPFNPPERYTFTQLAPTPDSL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCE VIPLGESCLYEIRLAEGTKTRPQTAEYFFRNRVSQQAPLADGTYKIHIPPMQQADNLEFF EEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEE AGDAVRRLNIIPKGRPSLLGAEAGVAYPAYMARANGREAMRAGVISAPEGSTLTLKVSAS ECCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCEECCCCCEEEEEECHH QRLQSAEDAQGQPLRVDGSSVIIPNILLEKEPREIELDWMDSDGLAASRPVKIRLEPIED HHHHHHCCCCCCCEEECCCCEEECHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC KQPSIYLRGGENDRYVLEDTSIELEVEAADDFGLREMGVEWQGEKSFYDGNEGENGASAP CCCEEEEECCCCCCEEEECCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC KPAGADKPAPGLRGEKVLADGQPTQTGLKGTFLFQARALKLSPQRVVIRGFTQDYKPGGR CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEHHHCCCCCEEEEECCCCCCCCCCC RVYSEPMIIFVLSKSEHAQMIRNELERITSELEGMIRRMDAMADEAKRLKGMESGKLKDA EEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ESQERLHALADEEQANRRELGDLLNRSESLFKEASRNSQIDPAGMKEFMKGISMLKPIPD HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC GPMKMAQKQFRDSASESRSEQESRKDLNDGENSHSEATQALKDTMNQLSKSAQDMEASTF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VARLRQAASKEDSIAHALAGQINTIAGMTMEELDPSTRREMETIATLQNASTQDIGWILE HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH DLSYYKSRTGERIYSDLYNQMNAFSLRDKLDLVHGNILNAITARSIDESRLYASTLRHWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KLIDDYKKSRRGGGGGGGGGGGSQSSISDAEFEFMLKLIRMIQQEQDIRMRTRAAEQEHR HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKFTLPAP CCCCCCCC >Mature Secondary Structure MLEAVCLAGIAVILSYALLYLSDRLWETPPAVGWLLFFIAVSGLAVFIPWWSFRWVWQRR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHH TESQLARLISRTDAALGDRLLGVIELDSEKHGRQYGSEKLKEAAMEQVAREVSARDLTAN HHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPRPSHRKLFVLLTVLAACTAAVCAVSPEAAGNALKRWVRPFNPPERYTFTQLAPTPDSL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCE VIPLGESCLYEIRLAEGTKTRPQTAEYFFRNRVSQQAPLADGTYKIHIPPMQQADNLEFF EEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEE AGDAVRRLNIIPKGRPSLLGAEAGVAYPAYMARANGREAMRAGVISAPEGSTLTLKVSAS ECCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCEECCCCCEEEEEECHH QRLQSAEDAQGQPLRVDGSSVIIPNILLEKEPREIELDWMDSDGLAASRPVKIRLEPIED HHHHHHCCCCCCCEEECCCCEEECHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC KQPSIYLRGGENDRYVLEDTSIELEVEAADDFGLREMGVEWQGEKSFYDGNEGENGASAP CCCEEEEECCCCCCEEEECCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC KPAGADKPAPGLRGEKVLADGQPTQTGLKGTFLFQARALKLSPQRVVIRGFTQDYKPGGR CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEHHHCCCCCEEEEECCCCCCCCCCC RVYSEPMIIFVLSKSEHAQMIRNELERITSELEGMIRRMDAMADEAKRLKGMESGKLKDA EEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ESQERLHALADEEQANRRELGDLLNRSESLFKEASRNSQIDPAGMKEFMKGISMLKPIPD HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC GPMKMAQKQFRDSASESRSEQESRKDLNDGENSHSEATQALKDTMNQLSKSAQDMEASTF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VARLRQAASKEDSIAHALAGQINTIAGMTMEELDPSTRREMETIATLQNASTQDIGWILE HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH DLSYYKSRTGERIYSDLYNQMNAFSLRDKLDLVHGNILNAITARSIDESRLYASTLRHWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KLIDDYKKSRRGGGGGGGGGGGSQSSISDAEFEFMLKLIRMIQQEQDIRMRTRAAEQEHR HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKFTLPAP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA