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The map label for this gene is ywbD [H]

Identifier: 187736459

GI number: 187736459

Start: 2402271

End: 2403164

Strand: Reverse

Name: ywbD [H]

Synonym: Amuc_1977

Alternate gene names: 187736459

Gene position: 2403164-2402271 (Counterclockwise)

Preceding gene: 187736460

Following gene: 187736458

Centisome position: 90.21

GC content: 59.28

Gene sequence:

>894_bases
GTGGAGAGAAATTATCATTATTGCGTGGAACGCAACAGGGAATTGATTCCGCCGGATACGGATATGTTCCGGGTCATGGA
CGGGGTGGGGGATGGAATCCCCGGTGTCTTTGTGGATCAGATGGCGGATCGTCTTCTCGTCTCCACACGCGGCTGTTCCA
TTCCTGCGGACCTGGAAAGCGAACTCCGGGATACGGGCATGCCCGTATTCCACAAAAAACTGGAACAAAACCAGAAAGAC
GCGCCCGTCCAGATCGCCGGGCCGCTCCTTCCCCTGCAATTTACGGCCTTGGAGCAGGGAGTGCGTTTTAAAATAGACAT
GTCCGCCGGTTATTCCCAGGGAATTTTTCTGGATCAGCGCGACCACCGCCGCCGGGTGAGGGAAAAAAGCGCTCCGGGCA
TGAGGGTGCTGAATACTTTTGCCTATACGGGAGCCTTTTCCGTTTATGCGGCCCTGGGCGGAGCGCAGACAACCACGCTG
GATCTGGCGCAGCCGTGCCTGGACTGGGCCAGGGAAAATTTCATGCTGAACGGCATTGAGCCCTCCGCCCAGTATTTCTG
CAAGGGGGACGCGCGCCGCTGGCTGGAACGGTTCGCCAGGCAGGGCCGCACCTTTCACGGCATTATTCTGGACCCTCCCA
CGTTTTCCCGGGATGACCGCGGAAAGGTGTTCCGGGTGGAATCCCACTACGGGGAGCTGGTGGCGCTGGCTCGCGAATGC
CTGGAACCGGGCGGCTGGATGCTGTGCACCAGCAACTGCCGCAAGCTGGGCCACGAGGACTTCCGCAGGATGGTGGCCCG
TGCCGTTCCCGGTTTCCGCCTGACTCATGACCCCATGCCCCCGGATTTCTCCGGGGAGGATTATTTGAAAAGACTGTGGG
TAGACTGGAAATGA

Upstream 100 bases:

>100_bases
AACCGTTTTTCCCTGGCGGAACTCTTGCTCCGGAGGAAATGAGGCTCCTGCTTCTTTGACATTGCGGGAACGTTCTTCAT
CCGTTACTCTTTGCTCTGCC

Downstream 100 bases:

>100_bases
ATATTTTATGAAAAATTTTCCTCTGCATCGCTGACGCATTTTATCCTTTTGAAAACTCTTCCGGTCTGGTAGAAAACCGC
CCAATTGCTTTTTCTATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MERNYHYCVERNRELIPPDTDMFRVMDGVGDGIPGVFVDQMADRLLVSTRGCSIPADLESELRDTGMPVFHKKLEQNQKD
APVQIAGPLLPLQFTALEQGVRFKIDMSAGYSQGIFLDQRDHRRRVREKSAPGMRVLNTFAYTGAFSVYAALGGAQTTTL
DLAQPCLDWARENFMLNGIEPSAQYFCKGDARRWLERFARQGRTFHGIILDPPTFSRDDRGKVFRVESHYGELVALAREC
LEPGGWMLCTSNCRKLGHEDFRRMVARAVPGFRLTHDPMPPDFSGEDYLKRLWVDWK

Sequences:

>Translated_297_residues
MERNYHYCVERNRELIPPDTDMFRVMDGVGDGIPGVFVDQMADRLLVSTRGCSIPADLESELRDTGMPVFHKKLEQNQKD
APVQIAGPLLPLQFTALEQGVRFKIDMSAGYSQGIFLDQRDHRRRVREKSAPGMRVLNTFAYTGAFSVYAALGGAQTTTL
DLAQPCLDWARENFMLNGIEPSAQYFCKGDARRWLERFARQGRTFHGIILDPPTFSRDDRGKVFRVESHYGELVALAREC
LEPGGWMLCTSNCRKLGHEDFRRMVARAVPGFRLTHDPMPPDFSGEDYLKRLWVDWK
>Mature_297_residues
MERNYHYCVERNRELIPPDTDMFRVMDGVGDGIPGVFVDQMADRLLVSTRGCSIPADLESELRDTGMPVFHKKLEQNQKD
APVQIAGPLLPLQFTALEQGVRFKIDMSAGYSQGIFLDQRDHRRRVREKSAPGMRVLNTFAYTGAFSVYAALGGAQTTTL
DLAQPCLDWARENFMLNGIEPSAQYFCKGDARRWLERFARQGRTFHGIILDPPTFSRDDRGKVFRVESHYGELVALAREC
LEPGGWMLCTSNCRKLGHEDFRRMVARAVPGFRLTHDPMPPDFSGEDYLKRLWVDWK

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=262, Percent_Identity=30.9160305343511, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1787181, Length=199, Percent_Identity=30.1507537688442, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 33912; Mature: 33912

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERNYHYCVERNRELIPPDTDMFRVMDGVGDGIPGVFVDQMADRLLVSTRGCSIPADLES
CCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ELRDTGMPVFHKKLEQNQKDAPVQIAGPLLPLQFTALEQGVRFKIDMSAGYSQGIFLDQR
HHHHCCCHHHHHHHHCCCCCCCEEEECCCCCEEHHHHHCCCEEEEECCCCCCCCEEECCH
DHRRRVREKSAPGMRVLNTFAYTGAFSVYAALGGAQTTTLDLAQPCLDWARENFMLNGIE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEECCCC
PSAQYFCKGDARRWLERFARQGRTFHGIILDPPTFSRDDRGKVFRVESHYGELVALAREC
HHHHHEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
LEPGGWMLCTSNCRKLGHEDFRRMVARAVPGFRLTHDPMPPDFSGEDYLKRLWVDWK
CCCCCEEEECHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MERNYHYCVERNRELIPPDTDMFRVMDGVGDGIPGVFVDQMADRLLVSTRGCSIPADLES
CCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ELRDTGMPVFHKKLEQNQKDAPVQIAGPLLPLQFTALEQGVRFKIDMSAGYSQGIFLDQR
HHHHCCCHHHHHHHHCCCCCCCEEEECCCCCEEHHHHHCCCEEEEECCCCCCCCEEECCH
DHRRRVREKSAPGMRVLNTFAYTGAFSVYAALGGAQTTTLDLAQPCLDWARENFMLNGIE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEECCCC
PSAQYFCKGDARRWLERFARQGRTFHGIILDPPTFSRDDRGKVFRVESHYGELVALAREC
HHHHHEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
LEPGGWMLCTSNCRKLGHEDFRRMVARAVPGFRLTHDPMPPDFSGEDYLKRLWVDWK
CCCCCEEEECHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]