Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is hpt [H]
Identifier: 187736419
GI number: 187736419
Start: 2350039
End: 2350581
Strand: Reverse
Name: hpt [H]
Synonym: Amuc_1937
Alternate gene names: 187736419
Gene position: 2350581-2350039 (Counterclockwise)
Preceding gene: 187736421
Following gene: 187736418
Centisome position: 88.23
GC content: 53.22
Gene sequence:
>543_bases ATGACTTACACCATCACTCCTTTGATTGCAGAGGATGCCATCTGCGCGCGCGTCAGGGAACTGGCCGCATCCATTGACAG GGCCATGGCAGGAAAACCCTATATTTTATTGCTGCTGCTGAACGGCGCTCTTCCTTTCGCTGCGATGTTGGAGAAGCATT TGAAATCCCGGCCTGCGGTGAAAGCCGTCAAGATTTCCAGTTATGCCGGAATGAGAAATTCCGGTTCCGTGGCGTGGGAG GGGGATTGCGGGGATTTCCAGCCCGATGTGCCTGTTCTGGTGGTGGATGACGTTCTGGATACGGGCGCTACGCTGGATGA AGTTTGCCGGGAATTGAAAAGAAGAGGGGCGAAGGAAGTCCTCACTGCTGTAGCCGTGGACAAGCACTGTTGCCGGAAAG TGCCTTTTGAGGCTGATTACGTGGCTTTTACGCAGGGAAACGATTTCCTGGTGGGGTTTGGAATGGACCTGGATGGGAAT TACCGGGAACTCCCGTACATTGGGAAAGTGGTCATGGCTGACACAGTTGAGAATTCAGATTGA
Upstream 100 bases:
>100_bases TTGTAAAATTTGCTGGAGCCCGGCCGGGAATGTTTTGTCTCCGTTCATTCTCCTTTAAGGATTGATTTTCTTACAGGAAA CATTATCATGCCCCGTTTCC
Downstream 100 bases:
>100_bases ACAACCTGTTGAAAAAAAGTGTCCAAAACAATTGGAGCGGCAGAATTATCCGCCGTCCTGCTTAACAAGGGAAACCGGAA AGGAGAACCAAGACATGAAA
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: HGPRT; HGPRTase [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTYTITPLIAEDAICARVRELAASIDRAMAGKPYILLLLLNGALPFAAMLEKHLKSRPAVKAVKISSYAGMRNSGSVAWE GDCGDFQPDVPVLVVDDVLDTGATLDEVCRELKRRGAKEVLTAVAVDKHCCRKVPFEADYVAFTQGNDFLVGFGMDLDGN YRELPYIGKVVMADTVENSD
Sequences:
>Translated_180_residues MTYTITPLIAEDAICARVRELAASIDRAMAGKPYILLLLLNGALPFAAMLEKHLKSRPAVKAVKISSYAGMRNSGSVAWE GDCGDFQPDVPVLVVDDVLDTGATLDEVCRELKRRGAKEVLTAVAVDKHCCRKVPFEADYVAFTQGNDFLVGFGMDLDGN YRELPYIGKVVMADTVENSD >Mature_179_residues TYTITPLIAEDAICARVRELAASIDRAMAGKPYILLLLLNGALPFAAMLEKHLKSRPAVKAVKISSYAGMRNSGSVAWEG DCGDFQPDVPVLVVDDVLDTGATLDEVCRELKRRGAKEVLTAVAVDKHCCRKVPFEADYVAFTQGNDFLVGFGMDLDGNY RELPYIGKVVMADTVENSD
Specific function: This Enzyme Acts Exclusively On Hypoxanthine; It Does Not Act On Guanine (By Similarity). [C]
COG id: COG0634
COG function: function code F; Hypoxanthine-guanine phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87081689, Length=177, Percent_Identity=32.7683615819209, Blast_Score=89, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17510817, Length=168, Percent_Identity=32.1428571428571, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005904 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.8 [H]
Molecular weight: Translated: 19589; Mature: 19458
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTITPLIAEDAICARVRELAASIDRAMAGKPYILLLLLNGALPFAAMLEKHLKSRPAV CCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCE KAVKISSYAGMRNSGSVAWEGDCGDFQPDVPVLVVDDVLDTGATLDEVCRELKRRGAKEV EEEEEHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHCCHHHH LTAVAVDKHCCRKVPFEADYVAFTQGNDFLVGFGMDLDGNYRELPYIGKVVMADTVENSD HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCHHHHEEEEECCCCCC >Mature Secondary Structure TYTITPLIAEDAICARVRELAASIDRAMAGKPYILLLLLNGALPFAAMLEKHLKSRPAV CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCE KAVKISSYAGMRNSGSVAWEGDCGDFQPDVPVLVVDDVLDTGATLDEVCRELKRRGAKEV EEEEEHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHCCHHHH LTAVAVDKHCCRKVPFEADYVAFTQGNDFLVGFGMDLDGNYRELPYIGKVVMADTVENSD HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]