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The map label for this gene is yclQ [H]

Identifier: 187736410

GI number: 187736410

Start: 2340651

End: 2341574

Strand: Reverse

Name: yclQ [H]

Synonym: Amuc_1928

Alternate gene names: 187736410

Gene position: 2341574-2340651 (Counterclockwise)

Preceding gene: 187736411

Following gene: 187736409

Centisome position: 87.89

GC content: 51.62

Gene sequence:

>924_bases
ATGAGAACAACAATCACCGCATTTCTGGCCGCATTGATTCTTCCCGGTCTTTCCATGGCCGCCGCAGATGAAGCCAAAAC
AATCACCGCCACGCACACGCTGGGCACGGTCGAGCTTCCGGTCAATCCGAAACGTGTCGCCGTGCTGGACTACGGTTCGC
TTGAGACCATCGGTGAACTGGGCGTCACTCCCGCGCTGGCTTTACCCAAAAAATTCCTTCCTCCTTACCTCTCCAAATTC
TCCGGAGAACAATATACGGATCTTGGAACGGTTAAGGAATTCAATATTGAAACCATCAATGCGTTCAAGCCGGACTTGAT
TATTATTTCAGGACGTCAGCAGGATTATTATCAAAAACTTTCCTCCATCGCCCCCGTTTACCTGGTCGATACTCTGGCCA
AGGATCAGCTGGGGGAAGCCAAGAAAAACATCAGGCTTCTGGGTGATGTGTTCGGCGTGCCCGAAAAGGCAGCCGAAGCC
GTCAAAAACATTGATGAAGCCGTAACCCGTACGAAGGACAAGGCCCAGGCCAGCGGCAAGAAAGCTCTCGTTCTCCTTAC
GAACGACGGCAAGGTAAGCGCTTACGGTTCGGGTTCCCGCTTTGGGTTGGTACACGATGCCCTGGGAGTGGCCCAGGCTG
ATAAAAACATCAAGGTGGGGGTTCATGGGCAGCAGGTGACTTATGAATACATTGCCATGCTCAATCCCGATATCATCTTT
GCGGTGGACCGTTCGGTAGCTATCGGCCGCTCGGCCAAAAATCCGAATGTCCTCAACAATGTGCTTGTGAATAAAACGAA
GGCGGCTAAAAACGGCGCCATCATCCTGCTTGACCCGCAGGTATGGTATCTTTCCGGCGGCGGCATCATTTCTCTGAACA
AGATGATCTCTGAAGTGGAAGCTGCCTTTACGGACAAAAAATAA

Upstream 100 bases:

>100_bases
TATGGATATCGCCATAGAACCCTATGGTGATAAAAAGATATGCGTATACTATGAATAGAATTTCCTTAAATTCCCAAAAC
AACAAACAACAACAAATAAT

Downstream 100 bases:

>100_bases
TTATTCCGTCTTTATTCATCACGAAGCAGGCCGCACGACCCTATGCTTCCGTTTCCCGGCTGGAGCGGCAGAGGCGTGCG
GCCCTTTTTCATTCAGTATC

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRTTITAFLAALILPGLSMAAADEAKTITATHTLGTVELPVNPKRVAVLDYGSLETIGELGVTPALALPKKFLPPYLSKF
SGEQYTDLGTVKEFNIETINAFKPDLIIISGRQQDYYQKLSSIAPVYLVDTLAKDQLGEAKKNIRLLGDVFGVPEKAAEA
VKNIDEAVTRTKDKAQASGKKALVLLTNDGKVSAYGSGSRFGLVHDALGVAQADKNIKVGVHGQQVTYEYIAMLNPDIIF
AVDRSVAIGRSAKNPNVLNNVLVNKTKAAKNGAIILLDPQVWYLSGGGIISLNKMISEVEAAFTDKK

Sequences:

>Translated_307_residues
MRTTITAFLAALILPGLSMAAADEAKTITATHTLGTVELPVNPKRVAVLDYGSLETIGELGVTPALALPKKFLPPYLSKF
SGEQYTDLGTVKEFNIETINAFKPDLIIISGRQQDYYQKLSSIAPVYLVDTLAKDQLGEAKKNIRLLGDVFGVPEKAAEA
VKNIDEAVTRTKDKAQASGKKALVLLTNDGKVSAYGSGSRFGLVHDALGVAQADKNIKVGVHGQQVTYEYIAMLNPDIIF
AVDRSVAIGRSAKNPNVLNNVLVNKTKAAKNGAIILLDPQVWYLSGGGIISLNKMISEVEAAFTDKK
>Mature_307_residues
MRTTITAFLAALILPGLSMAAADEAKTITATHTLGTVELPVNPKRVAVLDYGSLETIGELGVTPALALPKKFLPPYLSKF
SGEQYTDLGTVKEFNIETINAFKPDLIIISGRQQDYYQKLSSIAPVYLVDTLAKDQLGEAKKNIRLLGDVFGVPEKAAEA
VKNIDEAVTRTKDKAQASGKKALVLLTNDGKVSAYGSGSRFGLVHDALGVAQADKNIKVGVHGQQVTYEYIAMLNPDIIF
AVDRSVAIGRSAKNPNVLNNVLVNKTKAAKNGAIILLDPQVWYLSGGGIISLNKMISEVEAAFTDKK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 32900; Mature: 32900

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00435 PEROXIDASE_1 ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTITAFLAALILPGLSMAAADEAKTITATHTLGTVELPVNPKRVAVLDYGSLETIGEL
CCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCHHHHHHH
GVTPALALPKKFLPPYLSKFSGEQYTDLGTVKEFNIETINAFKPDLIIISGRQQDYYQKL
CCCCHHHCCHHHCCHHHHHHCCCCCCCCCCEEECCCEEECCCCCCEEEEECCCHHHHHHH
SSIAPVYLVDTLAKDQLGEAKKNIRLLGDVFGVPEKAAEAVKNIDEAVTRTKDKAQASGK
HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHCCCC
KALVLLTNDGKVSAYGSGSRFGLVHDALGVAQADKNIKVGVHGQQVTYEYIAMLNPDIIF
EEEEEEECCCEEEEECCCCCEEHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEE
AVDRSVAIGRSAKNPNVLNNVLVNKTKAAKNGAIILLDPQVWYLSGGGIISLNKMISEVE
EECCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHH
AAFTDKK
HHHCCCC
>Mature Secondary Structure
MRTTITAFLAALILPGLSMAAADEAKTITATHTLGTVELPVNPKRVAVLDYGSLETIGEL
CCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCHHHHHHH
GVTPALALPKKFLPPYLSKFSGEQYTDLGTVKEFNIETINAFKPDLIIISGRQQDYYQKL
CCCCHHHCCHHHCCHHHHHHCCCCCCCCCCEEECCCEEECCCCCCEEEEECCCHHHHHHH
SSIAPVYLVDTLAKDQLGEAKKNIRLLGDVFGVPEKAAEAVKNIDEAVTRTKDKAQASGK
HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHCCCC
KALVLLTNDGKVSAYGSGSRFGLVHDALGVAQADKNIKVGVHGQQVTYEYIAMLNPDIIF
EEEEEEECCCEEEEECCCCCEEHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEE
AVDRSVAIGRSAKNPNVLNNVLVNKTKAAKNGAIILLDPQVWYLSGGGIISLNKMISEVE
EECCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHH
AAFTDKK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]