Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736280
Identifier: 187736280
GI number: 187736280
Start: 2180400
End: 2181581
Strand: Reverse
Name: 187736280
Synonym: Amuc_1793
Alternate gene names: NA
Gene position: 2181581-2180400 (Counterclockwise)
Preceding gene: 187736281
Following gene: 187736279
Centisome position: 81.89
GC content: 53.13
Gene sequence:
>1182_bases ATGTTGAAAACGCAGCATTCTCCCATTCCCCCAGGCAGTGAAAAACACCACTACCACATACTTGACGGTTTGCGCGGCGT AGCCGCCATTGTCGTCGTATGGTTCCACATCTTTGAAGCCTACGCCACCAGCCATGTGGACCAAATCATCAACCACGGCT ACCTGGCCGTCGATTTTTTCTTCATGCTTTCCGGCTTTGTCATCGGCTACGCCTATGACAACCGCTGGAAAACGATGACG ACCAGGGAATTCATCAAACGCCGCCTTATACGCCTGCAGCCCATGGTAGCGATAGGGGCGCTCATCGGCGCGCTTATCTT CTATTTCCAGGGCTGCCCCGTATGGGATGTATCGCAGGTAGCGGTCATCTCCCTGTTCGCCGCTACCTTCGTCAATATTC TGCTCATTCCGTCTCCCCCCGGCATGGAAATCCGGGGTCTGGGAGAAATGTACCCGCTCAACGGCCCGAGCTGGTCCCTG TTCTTTGAATACATCGGCAACCTTCTTTATGCCCTCTTCATCCGGAAACTCTCTACACGCTCCCTGGCAATACTGGTTGT CTCGGCCGGGTGCGGCCTTGCCTCCTTCAGCTTCTGGGGGCCTAACGGAGACATATGCTCCGGATTCTCCATGACCGGCA CGGAATGGACGGGCGGCTCCCTGCGCCTGTTGTACTCCTTTTCAGCCGGTCTGCTCCTGTTCCGGCTGTTCAAGCCGCTC AACGTCAAAAATTCTTTCTGGTTATGCAGTCTGTCCCTTGCCATTCTGCTGGCCGTTCCCCGGCTGGGAGGACAAAATGC TTTCTGGATGAACAGCCTCTATGAAACAGCGTGCTTCACGGTATTTTTCCCGCTCATCCTCCTCTTTGGCGCTTCCGGCA AAATTACAAATCCCTATACGGATAAAATATGCCGTTTCCTGGGCAACATCTCCTACCCCCTGTACATGGTGCATTACCCG TTCATCTACTTGTACTATGCGTGGGTGAAAAACGAAAAGCTTTCCTTCCTGGACTCACTTCCCGGAGCCCTGGCCGTCGT CATTGGAAGCATTCTGCTGGCCTGGCTCTGCCTGAAACTCTATGATGAACCGGTCCGTAAATATTTGACAGCGCTTTTTT TAAAAAGAAAAGTCCTTCCAAGGGAAACTCCCGTCATTCAGGAAAGCGGACTTCCGCAATAA
Upstream 100 bases:
>100_bases AACTGCGCCTCCGGAGAACCTGCATCTACCGGAAAGGCGGAAAATGAGCAGCCGTTTTTTCACATTAAAACAAAAACAGC ATCGAACAACAGCTTCTCTC
Downstream 100 bases:
>100_bases TTCCTCTCCTTCCGGAGGAGATCAACAAAGGCGGGGCAGCGCATAAGGCCCCGCTGCAAACAAGATATCCGGCTCTTGTT TCACCTCTGCAGAAATAAAC
Product: acyltransferase 3
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MLKTQHSPIPPGSEKHHYHILDGLRGVAAIVVVWFHIFEAYATSHVDQIINHGYLAVDFFFMLSGFVIGYAYDNRWKTMT TREFIKRRLIRLQPMVAIGALIGALIFYFQGCPVWDVSQVAVISLFAATFVNILLIPSPPGMEIRGLGEMYPLNGPSWSL FFEYIGNLLYALFIRKLSTRSLAILVVSAGCGLASFSFWGPNGDICSGFSMTGTEWTGGSLRLLYSFSAGLLLFRLFKPL NVKNSFWLCSLSLAILLAVPRLGGQNAFWMNSLYETACFTVFFPLILLFGASGKITNPYTDKICRFLGNISYPLYMVHYP FIYLYYAWVKNEKLSFLDSLPGALAVVIGSILLAWLCLKLYDEPVRKYLTALFLKRKVLPRETPVIQESGLPQ
Sequences:
>Translated_393_residues MLKTQHSPIPPGSEKHHYHILDGLRGVAAIVVVWFHIFEAYATSHVDQIINHGYLAVDFFFMLSGFVIGYAYDNRWKTMT TREFIKRRLIRLQPMVAIGALIGALIFYFQGCPVWDVSQVAVISLFAATFVNILLIPSPPGMEIRGLGEMYPLNGPSWSL FFEYIGNLLYALFIRKLSTRSLAILVVSAGCGLASFSFWGPNGDICSGFSMTGTEWTGGSLRLLYSFSAGLLLFRLFKPL NVKNSFWLCSLSLAILLAVPRLGGQNAFWMNSLYETACFTVFFPLILLFGASGKITNPYTDKICRFLGNISYPLYMVHYP FIYLYYAWVKNEKLSFLDSLPGALAVVIGSILLAWLCLKLYDEPVRKYLTALFLKRKVLPRETPVIQESGLPQ >Mature_393_residues MLKTQHSPIPPGSEKHHYHILDGLRGVAAIVVVWFHIFEAYATSHVDQIINHGYLAVDFFFMLSGFVIGYAYDNRWKTMT TREFIKRRLIRLQPMVAIGALIGALIFYFQGCPVWDVSQVAVISLFAATFVNILLIPSPPGMEIRGLGEMYPLNGPSWSL FFEYIGNLLYALFIRKLSTRSLAILVVSAGCGLASFSFWGPNGDICSGFSMTGTEWTGGSLRLLYSFSAGLLLFRLFKPL NVKNSFWLCSLSLAILLAVPRLGGQNAFWMNSLYETACFTVFFPLILLFGASGKITNPYTDKICRFLGNISYPLYMVHYP FIYLYYAWVKNEKLSFLDSLPGALAVVIGSILLAWLCLKLYDEPVRKYLTALFLKRKVLPRETPVIQESGLPQ
Specific function: Seems to regulate the surface properties of the bacterium in the presence of plant cells or plant cell extracts [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44252; Mature: 44252
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTQHSPIPPGSEKHHYHILDGLRGVAAIVVVWFHIFEAYATSHVDQIINHGYLAVDFF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FMLSGFVIGYAYDNRWKTMTTREFIKRRLIRLQPMVAIGALIGALIFYFQGCPVWDVSQV HHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AVISLFAATFVNILLIPSPPGMEIRGLGEMYPLNGPSWSLFFEYIGNLLYALFIRKLSTR HHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SLAILVVSAGCGLASFSFWGPNGDICSGFSMTGTEWTGGSLRLLYSFSAGLLLFRLFKPL CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCC NVKNSFWLCSLSLAILLAVPRLGGQNAFWMNSLYETACFTVFFPLILLFGASGKITNPYT CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH DKICRFLGNISYPLYMVHYPFIYLYYAWVKNEKLSFLDSLPGALAVVIGSILLAWLCLKL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH YDEPVRKYLTALFLKRKVLPRETPVIQESGLPQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKTQHSPIPPGSEKHHYHILDGLRGVAAIVVVWFHIFEAYATSHVDQIINHGYLAVDFF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FMLSGFVIGYAYDNRWKTMTTREFIKRRLIRLQPMVAIGALIGALIFYFQGCPVWDVSQV HHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AVISLFAATFVNILLIPSPPGMEIRGLGEMYPLNGPSWSLFFEYIGNLLYALFIRKLSTR HHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SLAILVVSAGCGLASFSFWGPNGDICSGFSMTGTEWTGGSLRLLYSFSAGLLLFRLFKPL CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCC NVKNSFWLCSLSLAILLAVPRLGGQNAFWMNSLYETACFTVFFPLILLFGASGKITNPYT CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH DKICRFLGNISYPLYMVHYPFIYLYYAWVKNEKLSFLDSLPGALAVVIGSILLAWLCLKL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH YDEPVRKYLTALFLKRKVLPRETPVIQESGLPQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1860822 [H]