Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736263

Identifier: 187736263

GI number: 187736263

Start: 2161994

End: 2164408

Strand: Reverse

Name: 187736263

Synonym: Amuc_1776

Alternate gene names: NA

Gene position: 2164408-2161994 (Counterclockwise)

Preceding gene: 187736264

Following gene: 187736256

Centisome position: 81.24

GC content: 58.39

Gene sequence:

>2415_bases
ATGAAAAAACTGCTCGCCATTCTTTCGCTTTTCTTCTGCATGACTGTCACGCTTATGGCTCAGCAGGTGGTTACCACCTG
GCTGTCCGATGCCGTTGTGCCGGGAGAACAAACCCGTCTCTTCATCATCCTGACAGACGGAAGCATCGCCCGCCAGGACC
CGCTTCCCCGGGTAAAGGGCGCCAGCCTGCGCTGGGTCAGCCAGGGCAACTACATCCGCTGGCCGGGGTCTCCCAACCAA
TCCGCCTTCCTGATGGCCATTGAAGTAACGCCGGACGAAGTGGGCACCGTGGAAATCCCTTCCCTGACCCTGCAGGCCAA
CAATGGCCGCACTTATACCACGCTTCCCCAGACGCTGACTGTCTACCCTTACAGCGCCATCAAATGGAATACGCTGAACC
TGAACGGCACAGCAGTCCCGTACGGCATGCTGTGGCATGTGGACAACCAGAAACCCTATGTCCACCAGCCGGACCGCTGC
GAACTGAAAATTTACGCCCCGGAATACATTCTGGAATACACGGCGCCCGCCATCACCACCTCCAACCTGGCTACCTGGCG
CTTTGAACCCACGCTGGTGGAACTGCTCCGCGGCCAGCCTCGCGGTTCTGTACTTTACAAAGGCGTCAACTGGAATGTCA
TGACCTTCCAGAGCACCCTGTTCCCGCTGCGCGCCGGGGAGGTAACGGCGTCCGGCACTGTCACGGCACGCGCCGCCCTG
CCGGAGGCGGACCCTCTCATCGCCAACTTCATCCGTTCGGAAGTACTGGTGGAAATGGCCATTCCGGAAGTGAAAATCAC
AGCCCGGGAACTCCCCCCGGGAGCTCCCTCTTCCTTCACCAATGCCGTAGGGAATTTCCGCATCTCCTCCACCACGGATG
CGCGGGATCTCAGTGCCAATGAACCCATTACTGTTAAAATCAGGGTAACAGGAACAGGCAATATCCACAGTATCGCCTGC
CCGGCCCTCACAGACGCCTCCAACTGGAAACTCTATCCTCCCAACAAGCTGGACCCGGGCCAGAATACGCGCTCCATCCA
GGGAACCGTGGAATTTCAGCAAATGATGCGTCCGGTTGCCCAAACGGATGCCATCCCTCCCTTTGAACTCACTTTTTTTG
ACCCCAGCACGCAACAGTACAAAACCGTAACCACAGCCCCCATTCCCCTGGAATGGAAGGCCTCAGCCATTACTGGAACG
GCGGCCGGAGGTGCCGCTCCCGCCACGCCTCCCCCGGCAGGCACCATTCCGGTAGCTGAAATGACGGATATTTACGGGCT
CATGCCCGCCACCGTCATGAACGCCCTTACCGCTCCGGCTCACTGGGGGTGGTATTTCCTGGCCTACATCCCCGCCGTCA
TCCTGCTGGGAATGGCTCTGATCCGCTACATCCGGAAAATCCGGAAGGAAAGCTTCACGGCCAGGGAACGCATGAGAGCC
TTCCGCAGGCTCGCTTCCACTCCGCGCCAGGCAAGCTCCACGGAATTCCTGCGTGCCGCCGGCAACTTTATTGAATCCTA
TATTCCGCCTTCCAAGCAGAATGAAAAAATGAAAGATATCCTTCAACTCCGGGACGACAGGGCATTCAAGCCTTCGGAAT
CTTCGGAAGAACTGCCGCACGCGGAACGCCAGCACATGCTCCAGGCTATTAAAAAAGCCATCGCCAAGCTTCCCGTTCTC
ATGATGGCCGCCGTACTGGCCATGTCCCTGGCAGGAGCAACCGGAAACGCGTCGGAAACGGACAACCTGGGTGTAAAAGC
CTATGAACAGGGAGAGTACGCCAAAGCCATTGACTATTTCAGCAAGGAAAGCGGCAATATGAACCTTTCCAAGGCAGAAC
GCGCCTACGCCTGTTTCGGCATCGGCAATTCCTATTACCGCATGAACAAACCCGGTCTGGCCGCTCTCAATTACCGCCGT
GCTCTGGAACTCTCCCCGTACTTCACGGAAGCTGAATACAACCTGCTATTCATCGAACGCAAGGAGGGCGCCATCCTGCC
CGCCAACACCACGGAAAACCAGTGGCTCACTTACATCCGCCATGATACGCTCGGCCCCATCTCCATCCTGTCCGGAGCCG
TCATGCTCACCTTCCTGGCCCTGCTGACCGTTACCCGCAGACACGGGGCCCTGCTGACCATCCTGGCCACCCTTAGCGGA
CTGGTCACAGTAGCGGCTGTCATGAACTACATCATGTACCCGGAAACCCCGGAATCCATTCCGGCAGATCGGTTACTGGT
CGTTACCCAAAAAACGCCCGGCAGACATGCGGCGGACATGAACAGCCCTGCGCTCATCACCCTTCCGGAATCCACCCCGC
TCATCCTGCGCGCGGAACGCGGCTCCTGGTACTACGCCAGCACCTTCCAGAACACGCCCGTCTGGATACCCAGGACGGAC
GCTCAGCCGCTGTAG

Upstream 100 bases:

>100_bases
GTTCCCCAGCGTTCTCCGGAAATTCCTCCGGATAAGGATTACTAACCCGTTCCGCCCGCATCCGCGAAGCCACCCCTTTA
AACATATCCCGCAAAACAAG

Downstream 100 bases:

>100_bases
CGCTTTATTATCCCGCCTCCTCCTCTGGAGCCGCCTCTCCGGAATGCCGTATTCCCGGAAGGGCGGCTTTCTTTCAGCCG
CATTCAATCTTCTTCCCTAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Aerotolerance-Related Exported Protein; TPR Repeat-Containing Protein; BatD/BatE Protein; Aerotolerance-Related Protein BatD

Number of amino acids: Translated: 804; Mature: 804

Protein sequence:

>804_residues
MKKLLAILSLFFCMTVTLMAQQVVTTWLSDAVVPGEQTRLFIILTDGSIARQDPLPRVKGASLRWVSQGNYIRWPGSPNQ
SAFLMAIEVTPDEVGTVEIPSLTLQANNGRTYTTLPQTLTVYPYSAIKWNTLNLNGTAVPYGMLWHVDNQKPYVHQPDRC
ELKIYAPEYILEYTAPAITTSNLATWRFEPTLVELLRGQPRGSVLYKGVNWNVMTFQSTLFPLRAGEVTASGTVTARAAL
PEADPLIANFIRSEVLVEMAIPEVKITARELPPGAPSSFTNAVGNFRISSTTDARDLSANEPITVKIRVTGTGNIHSIAC
PALTDASNWKLYPPNKLDPGQNTRSIQGTVEFQQMMRPVAQTDAIPPFELTFFDPSTQQYKTVTTAPIPLEWKASAITGT
AAGGAAPATPPPAGTIPVAEMTDIYGLMPATVMNALTAPAHWGWYFLAYIPAVILLGMALIRYIRKIRKESFTARERMRA
FRRLASTPRQASSTEFLRAAGNFIESYIPPSKQNEKMKDILQLRDDRAFKPSESSEELPHAERQHMLQAIKKAIAKLPVL
MMAAVLAMSLAGATGNASETDNLGVKAYEQGEYAKAIDYFSKESGNMNLSKAERAYACFGIGNSYYRMNKPGLAALNYRR
ALELSPYFTEAEYNLLFIERKEGAILPANTTENQWLTYIRHDTLGPISILSGAVMLTFLALLTVTRRHGALLTILATLSG
LVTVAAVMNYIMYPETPESIPADRLLVVTQKTPGRHAADMNSPALITLPESTPLILRAERGSWYYASTFQNTPVWIPRTD
AQPL

Sequences:

>Translated_804_residues
MKKLLAILSLFFCMTVTLMAQQVVTTWLSDAVVPGEQTRLFIILTDGSIARQDPLPRVKGASLRWVSQGNYIRWPGSPNQ
SAFLMAIEVTPDEVGTVEIPSLTLQANNGRTYTTLPQTLTVYPYSAIKWNTLNLNGTAVPYGMLWHVDNQKPYVHQPDRC
ELKIYAPEYILEYTAPAITTSNLATWRFEPTLVELLRGQPRGSVLYKGVNWNVMTFQSTLFPLRAGEVTASGTVTARAAL
PEADPLIANFIRSEVLVEMAIPEVKITARELPPGAPSSFTNAVGNFRISSTTDARDLSANEPITVKIRVTGTGNIHSIAC
PALTDASNWKLYPPNKLDPGQNTRSIQGTVEFQQMMRPVAQTDAIPPFELTFFDPSTQQYKTVTTAPIPLEWKASAITGT
AAGGAAPATPPPAGTIPVAEMTDIYGLMPATVMNALTAPAHWGWYFLAYIPAVILLGMALIRYIRKIRKESFTARERMRA
FRRLASTPRQASSTEFLRAAGNFIESYIPPSKQNEKMKDILQLRDDRAFKPSESSEELPHAERQHMLQAIKKAIAKLPVL
MMAAVLAMSLAGATGNASETDNLGVKAYEQGEYAKAIDYFSKESGNMNLSKAERAYACFGIGNSYYRMNKPGLAALNYRR
ALELSPYFTEAEYNLLFIERKEGAILPANTTENQWLTYIRHDTLGPISILSGAVMLTFLALLTVTRRHGALLTILATLSG
LVTVAAVMNYIMYPETPESIPADRLLVVTQKTPGRHAADMNSPALITLPESTPLILRAERGSWYYASTFQNTPVWIPRTD
AQPL
>Mature_804_residues
MKKLLAILSLFFCMTVTLMAQQVVTTWLSDAVVPGEQTRLFIILTDGSIARQDPLPRVKGASLRWVSQGNYIRWPGSPNQ
SAFLMAIEVTPDEVGTVEIPSLTLQANNGRTYTTLPQTLTVYPYSAIKWNTLNLNGTAVPYGMLWHVDNQKPYVHQPDRC
ELKIYAPEYILEYTAPAITTSNLATWRFEPTLVELLRGQPRGSVLYKGVNWNVMTFQSTLFPLRAGEVTASGTVTARAAL
PEADPLIANFIRSEVLVEMAIPEVKITARELPPGAPSSFTNAVGNFRISSTTDARDLSANEPITVKIRVTGTGNIHSIAC
PALTDASNWKLYPPNKLDPGQNTRSIQGTVEFQQMMRPVAQTDAIPPFELTFFDPSTQQYKTVTTAPIPLEWKASAITGT
AAGGAAPATPPPAGTIPVAEMTDIYGLMPATVMNALTAPAHWGWYFLAYIPAVILLGMALIRYIRKIRKESFTARERMRA
FRRLASTPRQASSTEFLRAAGNFIESYIPPSKQNEKMKDILQLRDDRAFKPSESSEELPHAERQHMLQAIKKAIAKLPVL
MMAAVLAMSLAGATGNASETDNLGVKAYEQGEYAKAIDYFSKESGNMNLSKAERAYACFGIGNSYYRMNKPGLAALNYRR
ALELSPYFTEAEYNLLFIERKEGAILPANTTENQWLTYIRHDTLGPISILSGAVMLTFLALLTVTRRHGALLTILATLSG
LVTVAAVMNYIMYPETPESIPADRLLVVTQKTPGRHAADMNSPALITLPESTPLILRAERGSWYYASTFQNTPVWIPRTD
AQPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88697; Mature: 88697

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLAILSLFFCMTVTLMAQQVVTTWLSDAVVPGEQTRLFIILTDGSIARQDPLPRVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
ASLRWVSQGNYIRWPGSPNQSAFLMAIEVTPDEVGTVEIPSLTLQANNGRTYTTLPQTLT
CEEEEEECCCEEECCCCCCCCEEEEEEEECCCCCCEEECCEEEEEECCCEEEEECCCEEE
VYPYSAIKWNTLNLNGTAVPYGMLWHVDNQKPYVHQPDRCELKIYAPEYILEYTAPAITT
EECCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEE
SNLATWRFEPTLVELLRGQPRGSVLYKGVNWNVMTFQSTLFPLRAGEVTASGTVTARAAL
CCCEEEEECHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEECCCEEECCCEEEEECC
PEADPLIANFIRSEVLVEMAIPEVKITARELPPGAPSSFTNAVGNFRISSTTDARDLSAN
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCC
EPITVKIRVTGTGNIHSIACPALTDASNWKLYPPNKLDPGQNTRSIQGTVEFQQMMRPVA
CCEEEEEEEEECCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHH
QTDAIPPFELTFFDPSTQQYKTVTTAPIPLEWKASAITGTAAGGAAPATPPPAGTIPVAE
HHCCCCCEEEEEECCCCCCEEEEECCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCHHH
MTDIYGLMPATVMNALTAPAHWGWYFLAYIPAVILLGMALIRYIRKIRKESFTARERMRA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRLASTPRQASSTEFLRAAGNFIESYIPPSKQNEKMKDILQLRDDRAFKPSESSEELPH
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
AERQHMLQAIKKAIAKLPVLMMAAVLAMSLAGATGNASETDNLGVKAYEQGEYAKAIDYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
SKESGNMNLSKAERAYACFGIGNSYYRMNKPGLAALNYRRALELSPYFTEAEYNLLFIER
HCCCCCCCHHHHCCEEEEEECCCCEEEECCCCCEEECHHHEEECCCCEECCCEEEEEEEC
KEGAILPANTTENQWLTYIRHDTLGPISILSGAVMLTFLALLTVTRRHGALLTILATLSG
CCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LVTVAAVMNYIMYPETPESIPADRLLVVTQKTPGRHAADMNSPALITLPESTPLILRAER
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECC
GSWYYASTFQNTPVWIPRTDAQPL
CCEEEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure
MKKLLAILSLFFCMTVTLMAQQVVTTWLSDAVVPGEQTRLFIILTDGSIARQDPLPRVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
ASLRWVSQGNYIRWPGSPNQSAFLMAIEVTPDEVGTVEIPSLTLQANNGRTYTTLPQTLT
CEEEEEECCCEEECCCCCCCCEEEEEEEECCCCCCEEECCEEEEEECCCEEEEECCCEEE
VYPYSAIKWNTLNLNGTAVPYGMLWHVDNQKPYVHQPDRCELKIYAPEYILEYTAPAITT
EECCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEE
SNLATWRFEPTLVELLRGQPRGSVLYKGVNWNVMTFQSTLFPLRAGEVTASGTVTARAAL
CCCEEEEECHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEECCCEEECCCEEEEECC
PEADPLIANFIRSEVLVEMAIPEVKITARELPPGAPSSFTNAVGNFRISSTTDARDLSAN
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCC
EPITVKIRVTGTGNIHSIACPALTDASNWKLYPPNKLDPGQNTRSIQGTVEFQQMMRPVA
CCEEEEEEEEECCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHH
QTDAIPPFELTFFDPSTQQYKTVTTAPIPLEWKASAITGTAAGGAAPATPPPAGTIPVAE
HHCCCCCEEEEEECCCCCCEEEEECCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCHHH
MTDIYGLMPATVMNALTAPAHWGWYFLAYIPAVILLGMALIRYIRKIRKESFTARERMRA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRLASTPRQASSTEFLRAAGNFIESYIPPSKQNEKMKDILQLRDDRAFKPSESSEELPH
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
AERQHMLQAIKKAIAKLPVLMMAAVLAMSLAGATGNASETDNLGVKAYEQGEYAKAIDYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
SKESGNMNLSKAERAYACFGIGNSYYRMNKPGLAALNYRRALELSPYFTEAEYNLLFIER
HCCCCCCCHHHHCCEEEEEECCCCEEEECCCCCEEECHHHEEECCCCEECCCEEEEEEEC
KEGAILPANTTENQWLTYIRHDTLGPISILSGAVMLTFLALLTVTRRHGALLTILATLSG
CCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LVTVAAVMNYIMYPETPESIPADRLLVVTQKTPGRHAADMNSPALITLPESTPLILRAER
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECC
GSWYYASTFQNTPVWIPRTDAQPL
CCEEEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA