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The map label for this gene is ydaM [H]

Identifier: 187736253

GI number: 187736253

Start: 2148660

End: 2150177

Strand: Reverse

Name: ydaM [H]

Synonym: Amuc_1766

Alternate gene names: 187736253

Gene position: 2150177-2148660 (Counterclockwise)

Preceding gene: 187736256

Following gene: 187736252

Centisome position: 80.71

GC content: 55.8

Gene sequence:

>1518_bases
ATGTCTTTAAATTACAATTTTATCTGGCTTTTGTGCTATCTTCTGGTCCTCGTCGGCCTGGCAGGATATGGCTTCCACCG
CCTGAGCATCGTTTACCTGTACTGGAAGAACCGTAATAACAAGCCCCAGCCCAAAGCACGCTTCCAGGAACTGCCCGTCG
TGACGGTCCAGCTCCCCATGTTCAATGAGAAGTTCGTCGTGGACCGCCTTCTGGAATCCGTAGCCGCTCTGGATTATCCG
CAGGACAAGCTGGAAATCCAGATTCTGGACGATTCTACAGACGACACCACGGAACAATGCTACCGCAAGGTGGAGGAATT
AAAGTCCCGCGGCTTTGACGCCGTCTGCATCCACCGCACGGACCGCACCGGCTTCAAGGCAGGCGCGCTGGAAGCGGCTA
CCAAAGTAGCGAAGGGGGAATTCCTGCTGATTCTGGATGCTGACTTCGTTCCGGAACCGGATCTCCTGCAAAAAACCATC
CATTTCTTCACGGATGAAAACGTGGGCCTCGTTCAAACCCGCTGGGGCCACATCAACCGTGAATACAATCTCCTTACCCG
CATCCAGGGGATGTACCTGGACGGCCATTTTGCCATGGAACAGACGGCTCGCAACCGTTCCGGCCGCTTCTTCACCTTCA
ACGGCACTGCCGGCATATGGCGCAAGTGCGTGATCGGCGACGCAGGCGGATGGTCCCATGACACCCTGACGGAAGACATG
GACCTTTCCTACCGTGTCCAGCTCAGGGGCTGGCGCTTCATCTACCTGAACGACGTCGTTACCCCGGCGGAACTTCCCGT
GGACATGGACGGGTTCAAGTCCCAGCAGCACCGGTGGACCAAGGGTTCCATTCAGGTCTGCCAGAAAATCCTGCTGGACA
TCTGGCGCTCCAATGCCCCCCTTAAAGCCAAGGTAGAAGCCACCACCCACCTCACCTGCAATTATTCCTATCTGCTCCTG
GCATTGCTCTGCTTCCTGGTGTACCCCATCTGCACGCAGCGTATTCCGGAAAATGAAACGGTCTTCATGTGGTTTGTGAA
TGTGGCCCTGTTCTTCATGACCAGCGTGGCCGTCTGCATCTTTTACATGAGCGCCCAAATCGTGGTGCGTCCCAAATCCT
GGTGGAAGGAACTGCCGTACCTCCCCCTCCTTCTCACGCTGAGCGTGGGCATGGCGGTCAACAACGCCAAGGCTGTTCTG
GAAGCCATCTTCGGCCATCAGTCCGCCTTCGTCCGCACGCCCAAATACGGCGTAGACCGGAAGGAAGACCGTCGGCACGT
CTCCCAGCTCAAACGCAACGGGTACCGGGCTATTAAATCCGTCGTCATTCCCGTTCTGGAAATCGCCTGCGGAACTTTCT
TCCTGAACCTGATCATCATCATGATCCGCCAGGGCCATTACCTTTCCCCCATCCTGATGATTCCTTTCCTGGGTTTCTAT
TACACAGGTTTCTGTTCCCTGGGCCGCATGATTTCCAACCTGCTGCCCGCCAAGCAAACTGCCAAAGCCAAGAACTGA

Upstream 100 bases:

>100_bases
TGTCTTGACTCTCGCCCTATGGTGTCCTATACGGGCGTCACGTCAAGGAAATCCCCCTTCCCTGACGCAAAAAGATACCA
ACCCCCTTTGTACCCCCTGC

Downstream 100 bases:

>100_bases
CGCCTTTCCCATGCCTGCGCCTCTCTCGCAAGCAGCACGCCTGATTCAACTCGCCGGCGCAGCTTTCGCTGTGTTCGGAG
TCCTGGCATCCTGTTCCCGT

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSLNYNFIWLLCYLLVLVGLAGYGFHRLSIVYLYWKNRNNKPQPKARFQELPVVTVQLPMFNEKFVVDRLLESVAALDYP
QDKLEIQILDDSTDDTTEQCYRKVEELKSRGFDAVCIHRTDRTGFKAGALEAATKVAKGEFLLILDADFVPEPDLLQKTI
HFFTDENVGLVQTRWGHINREYNLLTRIQGMYLDGHFAMEQTARNRSGRFFTFNGTAGIWRKCVIGDAGGWSHDTLTEDM
DLSYRVQLRGWRFIYLNDVVTPAELPVDMDGFKSQQHRWTKGSIQVCQKILLDIWRSNAPLKAKVEATTHLTCNYSYLLL
ALLCFLVYPICTQRIPENETVFMWFVNVALFFMTSVAVCIFYMSAQIVVRPKSWWKELPYLPLLLTLSVGMAVNNAKAVL
EAIFGHQSAFVRTPKYGVDRKEDRRHVSQLKRNGYRAIKSVVIPVLEIACGTFFLNLIIIMIRQGHYLSPILMIPFLGFY
YTGFCSLGRMISNLLPAKQTAKAKN

Sequences:

>Translated_505_residues
MSLNYNFIWLLCYLLVLVGLAGYGFHRLSIVYLYWKNRNNKPQPKARFQELPVVTVQLPMFNEKFVVDRLLESVAALDYP
QDKLEIQILDDSTDDTTEQCYRKVEELKSRGFDAVCIHRTDRTGFKAGALEAATKVAKGEFLLILDADFVPEPDLLQKTI
HFFTDENVGLVQTRWGHINREYNLLTRIQGMYLDGHFAMEQTARNRSGRFFTFNGTAGIWRKCVIGDAGGWSHDTLTEDM
DLSYRVQLRGWRFIYLNDVVTPAELPVDMDGFKSQQHRWTKGSIQVCQKILLDIWRSNAPLKAKVEATTHLTCNYSYLLL
ALLCFLVYPICTQRIPENETVFMWFVNVALFFMTSVAVCIFYMSAQIVVRPKSWWKELPYLPLLLTLSVGMAVNNAKAVL
EAIFGHQSAFVRTPKYGVDRKEDRRHVSQLKRNGYRAIKSVVIPVLEIACGTFFLNLIIIMIRQGHYLSPILMIPFLGFY
YTGFCSLGRMISNLLPAKQTAKAKN
>Mature_504_residues
SLNYNFIWLLCYLLVLVGLAGYGFHRLSIVYLYWKNRNNKPQPKARFQELPVVTVQLPMFNEKFVVDRLLESVAALDYPQ
DKLEIQILDDSTDDTTEQCYRKVEELKSRGFDAVCIHRTDRTGFKAGALEAATKVAKGEFLLILDADFVPEPDLLQKTIH
FFTDENVGLVQTRWGHINREYNLLTRIQGMYLDGHFAMEQTARNRSGRFFTFNGTAGIWRKCVIGDAGGWSHDTLTEDMD
LSYRVQLRGWRFIYLNDVVTPAELPVDMDGFKSQQHRWTKGSIQVCQKILLDIWRSNAPLKAKVEATTHLTCNYSYLLLA
LLCFLVYPICTQRIPENETVFMWFVNVALFFMTSVAVCIFYMSAQIVVRPKSWWKELPYLPLLLTLSVGMAVNNAKAVLE
AIFGHQSAFVRTPKYGVDRKEDRRHVSQLKRNGYRAIKSVVIPVLEIACGTFFLNLIIIMIRQGHYLSPILMIPFLGFYY
TGFCSLGRMISNLLPAKQTAKAKN

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=306, Percent_Identity=23.5294117647059, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87082284, Length=282, Percent_Identity=28.3687943262411, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 58048; Mature: 57917

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNYNFIWLLCYLLVLVGLAGYGFHRLSIVYLYWKNRNNKPQPKARFQELPVVTVQLPM
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHHHCCEEEEEECC
FNEKFVVDRLLESVAALDYPQDKLEIQILDDSTDDTTEQCYRKVEELKSRGFDAVCIHRT
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
DRTGFKAGALEAATKVAKGEFLLILDADFVPEPDLLQKTIHFFTDENVGLVQTRWGHINR
CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC
EYNLLTRIQGMYLDGHFAMEQTARNRSGRFFTFNGTAGIWRKCVIGDAGGWSHDTLTEDM
HHHHHHHHCCEEECCHHHHHHHHCCCCCCEEEECCCHHHHHHHEEECCCCCCCCCCCCCC
DLSYRVQLRGWRFIYLNDVVTPAELPVDMDGFKSQQHRWTKGSIQVCQKILLDIWRSNAP
CCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCC
LKAKVEATTHLTCNYSYLLLALLCFLVYPICTQRIPENETVFMWFVNVALFFMTSVAVCI
CEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
FYMSAQIVVRPKSWWKELPYLPLLLTLSVGMAVNNAKAVLEAIFGHQSAFVRTPKYGVDR
HHHHCEEEEECHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEECCCCCCCC
KEDRRHVSQLKRNGYRAIKSVVIPVLEIACGTFFLNLIIIMIRQGHYLSPILMIPFLGFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YTGFCSLGRMISNLLPAKQTAKAKN
HHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure 
SLNYNFIWLLCYLLVLVGLAGYGFHRLSIVYLYWKNRNNKPQPKARFQELPVVTVQLPM
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHHHCCEEEEEECC
FNEKFVVDRLLESVAALDYPQDKLEIQILDDSTDDTTEQCYRKVEELKSRGFDAVCIHRT
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
DRTGFKAGALEAATKVAKGEFLLILDADFVPEPDLLQKTIHFFTDENVGLVQTRWGHINR
CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC
EYNLLTRIQGMYLDGHFAMEQTARNRSGRFFTFNGTAGIWRKCVIGDAGGWSHDTLTEDM
HHHHHHHHCCEEECCHHHHHHHHCCCCCCEEEECCCHHHHHHHEEECCCCCCCCCCCCCC
DLSYRVQLRGWRFIYLNDVVTPAELPVDMDGFKSQQHRWTKGSIQVCQKILLDIWRSNAP
CCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCC
LKAKVEATTHLTCNYSYLLLALLCFLVYPICTQRIPENETVFMWFVNVALFFMTSVAVCI
CEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
FYMSAQIVVRPKSWWKELPYLPLLLTLSVGMAVNNAKAVLEAIFGHQSAFVRTPKYGVDR
HHHHCEEEEECHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEECCCCCCCC
KEDRRHVSQLKRNGYRAIKSVVIPVLEIACGTFFLNLIIIMIRQGHYLSPILMIPFLGFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YTGFCSLGRMISNLLPAKQTAKAKN
HHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]