Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736252
Identifier: 187736252
GI number: 187736252
Start: 2147792
End: 2148649
Strand: Reverse
Name: 187736252
Synonym: Amuc_1765
Alternate gene names: NA
Gene position: 2148649-2147792 (Counterclockwise)
Preceding gene: 187736253
Following gene: 187736251
Centisome position: 80.65
GC content: 61.77
Gene sequence:
>858_bases ATGCCTGCGCCTCTCTCGCAAGCAGCACGCCTGATTCAACTCGCCGGCGCAGCTTTCGCTGTGTTCGGAGTCCTGGCATC CTGTTCCCGTCCGGATTATGAGCCCACTGCCATCGTGAAAGACGGCGCGGTCGTCAGCGTCAGGGACCAGAAAATGGCCG TCATGCGCAATGGCCGGGTGGTGAAGACCTACCCTGTCAGCACTTCCAAATTCGGCCTGGGAGACAGAAAGGGAAGCTGC CGCACTCCTCTGGGCGCCCATCGCATCGCTTCCAAAATCGGCAGCGGACAACCCAAGGGCATGGTGTTTAAAAGCCGCAA GCCCACCGGGGAATGCGTCGCGCCCAATTCTCCGGGCCGGGACCCCATCGTCACGCGCATCATGTGGCTGGAAGGCCTGG AACCCCGTAACCGGAACGCTCACTCGCGCCTGATTTATATCCACGGTACGGCGGAGGAACGCACCATCGGCACCCCCGCC TCCTACGGCTGCGTCCGGATGACGAGCAATGACGTATATGAGGCCTTCAACCTGCTCCGTACCGGTGACCCGGTCGTAAT CGAACGCTGTTCCATTGACGCGTCTCTGAAAGCCCTGGCCCAGGCGGAAAAAATGCAGGATTCTCCCCTGCTGGTCATGG CTTCCGCTCCAGACCGCATGGAAAACGCCAATACGGCCTCCGTCATTTCCCACCGCCGCAGGGCTTCCCGCCCCCCCGCC GTTGCCCTTTCCCGCAAGCAAACGGCATCAACCGGGAAAAAATCCGTTCCCTCCAGGAGGGCGGTCGCCCGCAGGACGTC CGGAAATTCAAGAACCGCCGTCCGTTCCTCCGGAGGGACCCGCTATACACTCGGGTAA
Upstream 100 bases:
>100_bases CTGGGTTTCTATTACACAGGTTTCTGTTCCCTGGGCCGCATGATTTCCAACCTGCTGCCCGCCAAGCAAACTGCCAAAGC CAAGAACTGACGCCTTTCCC
Downstream 100 bases:
>100_bases AAGCTCCCCTTCCCTCCTGTTTTTCCGGTGTTCCGTTTTCACCGCCTCCTGACATGGCCGTTTGAACGCATGGTTGCCTG CATCCGTCACATTTGGTAAC
Product: ErfK/YbiS/YcfS/YnhG family protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Superfamily; ErfK/SrfK Family Protein; ErfK/YbiS/YcfS/YnhG Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MPAPLSQAARLIQLAGAAFAVFGVLASCSRPDYEPTAIVKDGAVVSVRDQKMAVMRNGRVVKTYPVSTSKFGLGDRKGSC RTPLGAHRIASKIGSGQPKGMVFKSRKPTGECVAPNSPGRDPIVTRIMWLEGLEPRNRNAHSRLIYIHGTAEERTIGTPA SYGCVRMTSNDVYEAFNLLRTGDPVVIERCSIDASLKALAQAEKMQDSPLLVMASAPDRMENANTASVISHRRRASRPPA VALSRKQTASTGKKSVPSRRAVARRTSGNSRTAVRSSGGTRYTLG
Sequences:
>Translated_285_residues MPAPLSQAARLIQLAGAAFAVFGVLASCSRPDYEPTAIVKDGAVVSVRDQKMAVMRNGRVVKTYPVSTSKFGLGDRKGSC RTPLGAHRIASKIGSGQPKGMVFKSRKPTGECVAPNSPGRDPIVTRIMWLEGLEPRNRNAHSRLIYIHGTAEERTIGTPA SYGCVRMTSNDVYEAFNLLRTGDPVVIERCSIDASLKALAQAEKMQDSPLLVMASAPDRMENANTASVISHRRRASRPPA VALSRKQTASTGKKSVPSRRAVARRTSGNSRTAVRSSGGTRYTLG >Mature_284_residues PAPLSQAARLIQLAGAAFAVFGVLASCSRPDYEPTAIVKDGAVVSVRDQKMAVMRNGRVVKTYPVSTSKFGLGDRKGSCR TPLGAHRIASKIGSGQPKGMVFKSRKPTGECVAPNSPGRDPIVTRIMWLEGLEPRNRNAHSRLIYIHGTAEERTIGTPAS YGCVRMTSNDVYEAFNLLRTGDPVVIERCSIDASLKALAQAEKMQDSPLLVMASAPDRMENANTASVISHRRRASRPPAV ALSRKQTASTGKKSVPSRRAVARRTSGNSRTAVRSSGGTRYTLG
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30577; Mature: 30445
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPLSQAARLIQLAGAAFAVFGVLASCSRPDYEPTAIVKDGAVVSVRDQKMAVMRNGRV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEECCHHHHHHHCCEE VKTYPVSTSKFGLGDRKGSCRTPLGAHRIASKIGSGQPKGMVFKSRKPTGECVAPNSPGR EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCEECCCCCCC DPIVTRIMWLEGLEPRNRNAHSRLIYIHGTAEERTIGTPASYGCVRMTSNDVYEAFNLLR CHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH TGDPVVIERCSIDASLKALAQAEKMQDSPLLVMASAPDRMENANTASVISHRRRASRPPA CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHCCCCHHHHHHHHHHCCCCCC VALSRKQTASTGKKSVPSRRAVARRTSGNSRTAVRSSGGTRYTLG EEECCHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEECC >Mature Secondary Structure PAPLSQAARLIQLAGAAFAVFGVLASCSRPDYEPTAIVKDGAVVSVRDQKMAVMRNGRV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEECCHHHHHHHCCEE VKTYPVSTSKFGLGDRKGSCRTPLGAHRIASKIGSGQPKGMVFKSRKPTGECVAPNSPGR EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCEECCCCCCC DPIVTRIMWLEGLEPRNRNAHSRLIYIHGTAEERTIGTPASYGCVRMTSNDVYEAFNLLR CHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH TGDPVVIERCSIDASLKALAQAEKMQDSPLLVMASAPDRMENANTASVISHRRRASRPPA CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHCCCCHHHHHHHHHHCCCCCC VALSRKQTASTGKKSVPSRRAVARRTSGNSRTAVRSSGGTRYTLG EEECCHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA