Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736249

Identifier: 187736249

GI number: 187736249

Start: 2144660

End: 2146327

Strand: Reverse

Name: 187736249

Synonym: Amuc_1762

Alternate gene names: NA

Gene position: 2146327-2144660 (Counterclockwise)

Preceding gene: 187736250

Following gene: 187736245

Centisome position: 80.56

GC content: 58.99

Gene sequence:

>1668_bases
ATGCTGACAGGAGGAAAAAACGTGATTCCGCATGCGGTGCGGGACGTAGCGGATGCCGCCGCGGCGTTTTCCGCCCGCAT
CGGCCCCGACCGTCATTTCGATTCCCAGAAAAAGGTGGAGGAAGCCCTGGCCGAATGCTGCTCTCCGCAGAATGTCACCG
TCATCGGCATGACAGGGTCCGGCAAATCCTCTACGCTGGACGCCCTGGCCGGGGAACAGTTCTGTTCCCGCGTGTCCAGT
GAAGCCACACTGGTCCGCTGGCAGTACAGGCCTCATCCCGCCCCACACACCCATGAATGGGTTCTGGACCTTTTTTACCC
GTCGGACGCCCTGCTCAACCTGGAGTTCTGGGATACCATCGGCCTGGAACAGGAGGATGCCCCCAGAAAGCTGAAGCACA
TCGTTCCCAAATCGGATGCCATCCTTGTGGTTATTTCCGCCAGTGACGGCAACCATTCCGCCCTGTGGGACTATCTCCGG
ACGCTGGAGGAACGTCTTCATTCCCGCATGGTTCTCGTCATCACCCATGCGGAGCTGCTCTCCTTTGAGAAGCTTCAATC
CTTGAAAGAGGAGCTACGCTCCACCTCCCGGGAACACCTGGGCGTGCAGCTGCCTCTGTACCCTGTCACGACCGCCGGAG
AGCATGCAGGGGAAGGAGTGGAAGCCCTGACGGCATGCGTTCAGGAAGTGCTGAAACGCAGCCCGCTGACGGACAAGCGC
GTGGAACGCCTCCTGCTGGCTACGGACAGCCTTCTGGAAGAACAGGGGAAGGTGCTTGATGAACTGAGCCGCCTTTCCAA
GATGGATTCCGGCTTCCTGACGTCTATTGACCGGGAAATCGACCGCATCCAGCTCCAGATGGAGGATGAAATGCCGGCAC
GCCTCAAGGCGTACGCGCAATACGTGCAGGACTGCGTGCCGCGTCTGGGGAAAAAGTCGGCACGCCAGATGGGGCGTTTC
CTATCCATCCGGCGCACGATGATCCTGCACAAACTTCCTCCCGTCATTGACGAATGGTTTTATGAGCTGGTCAAATCCGG
CATTGAGGAACGGCACGCGTATTACAACAAGGAATTCCTGAACATCTGCCAGACGCACTGGAACCATGTGCGCCCGCGCG
TGAAGGAACAATGGGACTGCGACATAGGGGATTTCCCGGCCGCAAAACTCCAGACGGATCTGGAAGTGTACAAGGAGAGG
CTGGGACGTTCCATTTACATGCCCCTGAAGGACTTCGGCATCAAGCCGTGCCTCAGCAAGCTTTTTCTGGATCAGGAGGA
TGTGATGAGGACGGAAATCAAGCTGATGCTCCTTCTGGTGATTCTGGGAGCCCTGCTGGGCTGTTTCGGAGAGCACGCAG
CAGGGTTCGCCTGCGTAGGCGCGGCCCTGGCCGTCTGGGTGGGCGGCAACCTGGGGCTGGCCTGGATGCAGTTCCGCCTG
TCCCGCCAGATCGTGGCCGCAGCGGCGGAAATGCACATTGCCGTGGAATGCGGGCTACGCACCCCCCTGTATGAAGCCAT
GATCAGCGGACTTTCCGACTACCGAAAACTGTATGCGGACATCCGCGGTCAGGTAGCCGGAGGGGTAGAATACCTCCAGC
CCCTGCTCAACGCCCGCTACGACCTGTTTTATAAACTGACCGTGCAGAAACACCGGTTCCGTATCTAG

Upstream 100 bases:

>100_bases
CTCCCGCTTCGTGATTTTAGTTGGACAGAAGGAAAAGCGGCGTGTAGGTTTGTTCCGGAAAACCGGAACAGCCCGGACGG
AGACCTGATTTCATCACCCC

Downstream 100 bases:

>100_bases
CCTCTTTCCCTTTCTCCGGAAGGGTGTTACTGTTACTCCCCTCCCGGCGCAATCACCATGTCCACATGCCTGTCATGGGC
TTCCATGGGCAGATCGTCCA

Product: Miro domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLTGGKNVIPHAVRDVADAAAAFSARIGPDRHFDSQKKVEEALAECCSPQNVTVIGMTGSGKSSTLDALAGEQFCSRVSS
EATLVRWQYRPHPAPHTHEWVLDLFYPSDALLNLEFWDTIGLEQEDAPRKLKHIVPKSDAILVVISASDGNHSALWDYLR
TLEERLHSRMVLVITHAELLSFEKLQSLKEELRSTSREHLGVQLPLYPVTTAGEHAGEGVEALTACVQEVLKRSPLTDKR
VERLLLATDSLLEEQGKVLDELSRLSKMDSGFLTSIDREIDRIQLQMEDEMPARLKAYAQYVQDCVPRLGKKSARQMGRF
LSIRRTMILHKLPPVIDEWFYELVKSGIEERHAYYNKEFLNICQTHWNHVRPRVKEQWDCDIGDFPAAKLQTDLEVYKER
LGRSIYMPLKDFGIKPCLSKLFLDQEDVMRTEIKLMLLLVILGALLGCFGEHAAGFACVGAALAVWVGGNLGLAWMQFRL
SRQIVAAAAEMHIAVECGLRTPLYEAMISGLSDYRKLYADIRGQVAGGVEYLQPLLNARYDLFYKLTVQKHRFRI

Sequences:

>Translated_555_residues
MLTGGKNVIPHAVRDVADAAAAFSARIGPDRHFDSQKKVEEALAECCSPQNVTVIGMTGSGKSSTLDALAGEQFCSRVSS
EATLVRWQYRPHPAPHTHEWVLDLFYPSDALLNLEFWDTIGLEQEDAPRKLKHIVPKSDAILVVISASDGNHSALWDYLR
TLEERLHSRMVLVITHAELLSFEKLQSLKEELRSTSREHLGVQLPLYPVTTAGEHAGEGVEALTACVQEVLKRSPLTDKR
VERLLLATDSLLEEQGKVLDELSRLSKMDSGFLTSIDREIDRIQLQMEDEMPARLKAYAQYVQDCVPRLGKKSARQMGRF
LSIRRTMILHKLPPVIDEWFYELVKSGIEERHAYYNKEFLNICQTHWNHVRPRVKEQWDCDIGDFPAAKLQTDLEVYKER
LGRSIYMPLKDFGIKPCLSKLFLDQEDVMRTEIKLMLLLVILGALLGCFGEHAAGFACVGAALAVWVGGNLGLAWMQFRL
SRQIVAAAAEMHIAVECGLRTPLYEAMISGLSDYRKLYADIRGQVAGGVEYLQPLLNARYDLFYKLTVQKHRFRI
>Mature_555_residues
MLTGGKNVIPHAVRDVADAAAAFSARIGPDRHFDSQKKVEEALAECCSPQNVTVIGMTGSGKSSTLDALAGEQFCSRVSS
EATLVRWQYRPHPAPHTHEWVLDLFYPSDALLNLEFWDTIGLEQEDAPRKLKHIVPKSDAILVVISASDGNHSALWDYLR
TLEERLHSRMVLVITHAELLSFEKLQSLKEELRSTSREHLGVQLPLYPVTTAGEHAGEGVEALTACVQEVLKRSPLTDKR
VERLLLATDSLLEEQGKVLDELSRLSKMDSGFLTSIDREIDRIQLQMEDEMPARLKAYAQYVQDCVPRLGKKSARQMGRF
LSIRRTMILHKLPPVIDEWFYELVKSGIEERHAYYNKEFLNICQTHWNHVRPRVKEQWDCDIGDFPAAKLQTDLEVYKER
LGRSIYMPLKDFGIKPCLSKLFLDQEDVMRTEIKLMLLLVILGALLGCFGEHAAGFACVGAALAVWVGGNLGLAWMQFRL
SRQIVAAAAEMHIAVECGLRTPLYEAMISGLSDYRKLYADIRGQVAGGVEYLQPLLNARYDLFYKLTVQKHRFRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62730; Mature: 62730

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGGKNVIPHAVRDVADAAAAFSARIGPDRHFDSQKKVEEALAECCSPQNVTVIGMTGS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
GKSSTLDALAGEQFCSRVSSEATLVRWQYRPHPAPHTHEWVLDLFYPSDALLNLEFWDTI
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHEEEECCCCCEEEEEHHHHC
GLEQEDAPRKLKHIVPKSDAILVVISASDGNHSALWDYLRTLEERLHSRMVLVITHAELL
CCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHH
SFEKLQSLKEELRSTSREHLGVQLPLYPVTTAGEHAGEGVEALTACVQEVLKRSPLTDKR
HHHHHHHHHHHHHHHHHHHCCEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
VERLLLATDSLLEEQGKVLDELSRLSKMDSGFLTSIDREIDRIQLQMEDEMPARLKAYAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
YVQDCVPRLGKKSARQMGRFLSIRRTMILHKLPPVIDEWFYELVKSGIEERHAYYNKEFL
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NICQTHWNHVRPRVKEQWDCDIGDFPAAKLQTDLEVYKERLGRSIYMPLKDFGIKPCLSK
HHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCHHHCCHHHHHHH
LFLDQEDVMRTEIKLMLLLVILGALLGCFGEHAAGFACVGAALAVWVGGNLGLAWMQFRL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRQIVAAAAEMHIAVECGLRTPLYEAMISGLSDYRKLYADIRGQVAGGVEYLQPLLNARY
HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHH
DLFYKLTVQKHRFRI
HEEEEEEEHHHHCCC
>Mature Secondary Structure
MLTGGKNVIPHAVRDVADAAAAFSARIGPDRHFDSQKKVEEALAECCSPQNVTVIGMTGS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
GKSSTLDALAGEQFCSRVSSEATLVRWQYRPHPAPHTHEWVLDLFYPSDALLNLEFWDTI
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHEEEECCCCCEEEEEHHHHC
GLEQEDAPRKLKHIVPKSDAILVVISASDGNHSALWDYLRTLEERLHSRMVLVITHAELL
CCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHH
SFEKLQSLKEELRSTSREHLGVQLPLYPVTTAGEHAGEGVEALTACVQEVLKRSPLTDKR
HHHHHHHHHHHHHHHHHHHCCEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
VERLLLATDSLLEEQGKVLDELSRLSKMDSGFLTSIDREIDRIQLQMEDEMPARLKAYAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
YVQDCVPRLGKKSARQMGRFLSIRRTMILHKLPPVIDEWFYELVKSGIEERHAYYNKEFL
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NICQTHWNHVRPRVKEQWDCDIGDFPAAKLQTDLEVYKERLGRSIYMPLKDFGIKPCLSK
HHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCHHHCCHHHHHHH
LFLDQEDVMRTEIKLMLLLVILGALLGCFGEHAAGFACVGAALAVWVGGNLGLAWMQFRL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRQIVAAAAEMHIAVECGLRTPLYEAMISGLSDYRKLYADIRGQVAGGVEYLQPLLNARY
HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHH
DLFYKLTVQKHRFRI
HEEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA