Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is ygfA [C]
Identifier: 187736248
GI number: 187736248
Start: 2144037
End: 2144627
Strand: Direct
Name: ygfA [C]
Synonym: Amuc_1761
Alternate gene names: 187736248
Gene position: 2144037-2144627 (Clockwise)
Preceding gene: 187736247
Following gene: 187736254
Centisome position: 80.48
GC content: 62.77
Gene sequence:
>591_bases ATGGAAGGAAAAGCATCCCAATCCGGAACCGTAAGCGGTCCGGCGGCTGCCAAACGGGAAGTGCGCCGCATGATACGTGA AAGGGTGGGCGGATTGGATGCCGCCGCCCGGGAAGCCATGTCCCGTTCCATCTGCCTCCGTGTGTCGGCTCTGGTGCGGG AGAAGAATTTCCGGCGCGTGGCTGTTTTTGCCGCCAGGCCGGGAGAGGTGGATTTGCTTTCCCTGCTGGATCTGCTTCCG GACCGGGAATGGTACTTCCCGCTGGTGCATGAGGGGAGAAGGCTGAGTTTTCACCGTGTATGCCATCACGGGGAATTGGT GGCGGGCAGCTGGGGCATACGCGAACCCGGTCCGGGATGCCCGGAACTGCATGCGGGGGAAATGGATTTGATCGTGCTGC CTGGGGCCGCATTTACCAGGGACGGCAAGCGGCTGGGGTATGGCGGCGGATTTTATGATACGCTGCTGGCCGGCCCGGCT GCTGGGGTGCCGCTGGCGGGAGTCTGCTTCCCCTGCCAGCTTCTGGACGATCTGCCCATGGAAGCCCATGACAGGCATGT GGACATGGTGATTGCGCCGGGAGGGGAGTAA
Upstream 100 bases:
>100_bases GGCTGAAGGAGATGGTGAAGGAAGACGGCCGTGCCGTTTGGCTGGAGGATGGGCATCCGCGCAACTCCCTGGAAAGCGTA TTTCTAAAAAGTTTGTTGGA
Downstream 100 bases:
>100_bases CAGTAACACCCTTCCGGAGAAAGGGAAAGAGGCTAGATACGGAACCGGTGTTTCTGCACGGTCAGTTTATAAAACAGGTC GTAGCGGGCGTTGAGCAGGG
Product: 5-formyltetrahydrofolate cyclo-ligase
Products: ADP; phosphate; 5,10-methenyltetrahydrofolate
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MEGKASQSGTVSGPAAAKREVRRMIRERVGGLDAAAREAMSRSICLRVSALVREKNFRRVAVFAARPGEVDLLSLLDLLP DREWYFPLVHEGRRLSFHRVCHHGELVAGSWGIREPGPGCPELHAGEMDLIVLPGAAFTRDGKRLGYGGGFYDTLLAGPA AGVPLAGVCFPCQLLDDLPMEAHDRHVDMVIAPGGE
Sequences:
>Translated_196_residues MEGKASQSGTVSGPAAAKREVRRMIRERVGGLDAAAREAMSRSICLRVSALVREKNFRRVAVFAARPGEVDLLSLLDLLP DREWYFPLVHEGRRLSFHRVCHHGELVAGSWGIREPGPGCPELHAGEMDLIVLPGAAFTRDGKRLGYGGGFYDTLLAGPA AGVPLAGVCFPCQLLDDLPMEAHDRHVDMVIAPGGE >Mature_196_residues MEGKASQSGTVSGPAAAKREVRRMIRERVGGLDAAAREAMSRSICLRVSALVREKNFRRVAVFAARPGEVDLLSLLDLLP DREWYFPLVHEGRRLSFHRVCHHGELVAGSWGIREPGPGCPELHAGEMDLIVLPGAAFTRDGKRLGYGGGFYDTLLAGPA AGVPLAGVCFPCQLLDDLPMEAHDRHVDMVIAPGGE
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]
Homologues:
Organism=Escherichia coli, GI1789278, Length=177, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6321031, Length=206, Percent_Identity=27.6699029126214, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI161077430, Length=191, Percent_Identity=27.2251308900524, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002698 [H]
Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]
EC number: 6.3.3.2
Molecular weight: Translated: 21178; Mature: 21178
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGKASQSGTVSGPAAAKREVRRMIRERVGGLDAAAREAMSRSICLRVSALVREKNFRRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE AVFAARPGEVDLLSLLDLLPDREWYFPLVHEGRRLSFHRVCHHGELVAGSWGIREPGPGC EEEECCCCCHHHHHHHHHCCCCCEECHHHHCCCCCHHHHHHCCCCEEECCCCCCCCCCCC PELHAGEMDLIVLPGAAFTRDGKRLGYGGGFYDTLLAGPAAGVPLAGVCFPCQLLDDLPM CCCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC EAHDRHVDMVIAPGGE CCCCCEEEEEEECCCC >Mature Secondary Structure MEGKASQSGTVSGPAAAKREVRRMIRERVGGLDAAAREAMSRSICLRVSALVREKNFRRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE AVFAARPGEVDLLSLLDLLPDREWYFPLVHEGRRLSFHRVCHHGELVAGSWGIREPGPGC EEEECCCCCHHHHHHHHHCCCCCEECHHHHCCCCCHHHHHHCCCCEEECCCCCCCCCCCC PELHAGEMDLIVLPGAAFTRDGKRLGYGGGFYDTLLAGPAAGVPLAGVCFPCQLLDDLPM CCCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC EAHDRHVDMVIAPGGE CCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 5-formyltetrahydrofolate
Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]