Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736212
Identifier: 187736212
GI number: 187736212
Start: 2106502
End: 2107251
Strand: Reverse
Name: 187736212
Synonym: Amuc_1725
Alternate gene names: NA
Gene position: 2107251-2106502 (Counterclockwise)
Preceding gene: 187736213
Following gene: 187736207
Centisome position: 79.1
GC content: 56.27
Gene sequence:
>750_bases ATGGAACATGCCAGCAACAAGGAAATCTATTCCGTTCAGGCAACCGTCCGCACTTACGAAAGCGGTGCGAATGGCCTGAT GAAACCGGAAACGGTTCTGCACTGGTTTCAGGAAATAGCGGAAGCCCATGCCTCCTGCCTGGGTTTCGGCTATGATTTCG TAACGTCCCGCAGCCTGGCTTGGGTGGAAGTGCGCATGGATGCGGCCGTCAGCCGCCTTCCCCGGTGGAAGGAAACGGTG GAACTCCGAACCTGGACGGCCCAGGAAACGCCTCTGCTGGCGCGCCGCAACCTGGAAATCAGGGATGCCCAAGGCAACTG CATCGTTGCAGCAAGCTGTCTGTGGGCTGTCATTGACATACGCCGCAGGCGTCCTGTGCCATTAAACAGGCATATCAGCT CTTTCCCGGATACCCCATGCAAAGAAACGGTGGCTCCGGTATCCATGGACATTTCGGGACTTCTGCCGATGATCAGGGAA TGGACGGCGGAACGCCGGGATACGGATTTCAACCGCCACATCAACAATGCCGCCTACCTGGTCTGGGCTCTGGACTCCCT TCCGGACTCCTGGCTAAAGAACCACCAACTGACGGGAATTCACCTGCATTTTAGAAAAGAAACCCATGCGGGAGATTCCA TGAAATCCCTGCTGTTCTTCCGGGACTCCCTCACCACCCACCACCTCATGCACGGAGATGAACTGCGGGCGGAAGCGGTA TTGGAATGGAAAACCGCTGAAATCGCATAA
Upstream 100 bases:
>100_bases ACGGGGCCATTCATTTACCGGGGGTGCGGCATGCCAAACAGCCGGATATTACCCGTTTTTGACTGGCTCCGAAAGAACGG CTCCGCTAGCATAAGATGTT
Downstream 100 bases:
>100_bases AAAAGGCCCTATTGCTCGCGTTCCGTTCTTTTCCGGCTCCGGACAGCGGAGAGGGCTTCCGGAAACATTTGGCGCGTTTT TACAGATTTGAGGAGAGGAT
Product: acyl-ACP thioesterase
Products: [acyl-carrier protein]; oleate
Alternate protein names: Acyl-Acyl Carrier Protein Thioesterase; Acyl-ACP Thioesterase Family Protein; Oleoyl-[Acyl-Carrier Protein] Thioesterase; Oleoyl-(Acyl-Carrier Protein) Thioesterase; Oleoyl-[Acyl-Carrier-Protein] Hydrolase; Oleoyl-Acyl Carrier Protein Thioesterase; Acyl Carrier Protein Thioesterase-Like Protein; Acyl-ACP Thioesterase-Like
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MEHASNKEIYSVQATVRTYESGANGLMKPETVLHWFQEIAEAHASCLGFGYDFVTSRSLAWVEVRMDAAVSRLPRWKETV ELRTWTAQETPLLARRNLEIRDAQGNCIVAASCLWAVIDIRRRRPVPLNRHISSFPDTPCKETVAPVSMDISGLLPMIRE WTAERRDTDFNRHINNAAYLVWALDSLPDSWLKNHQLTGIHLHFRKETHAGDSMKSLLFFRDSLTTHHLMHGDELRAEAV LEWKTAEIA
Sequences:
>Translated_249_residues MEHASNKEIYSVQATVRTYESGANGLMKPETVLHWFQEIAEAHASCLGFGYDFVTSRSLAWVEVRMDAAVSRLPRWKETV ELRTWTAQETPLLARRNLEIRDAQGNCIVAASCLWAVIDIRRRRPVPLNRHISSFPDTPCKETVAPVSMDISGLLPMIRE WTAERRDTDFNRHINNAAYLVWALDSLPDSWLKNHQLTGIHLHFRKETHAGDSMKSLLFFRDSLTTHHLMHGDELRAEAV LEWKTAEIA >Mature_249_residues MEHASNKEIYSVQATVRTYESGANGLMKPETVLHWFQEIAEAHASCLGFGYDFVTSRSLAWVEVRMDAAVSRLPRWKETV ELRTWTAQETPLLARRNLEIRDAQGNCIVAASCLWAVIDIRRRRPVPLNRHISSFPDTPCKETVAPVSMDISGLLPMIRE WTAERRDTDFNRHINNAAYLVWALDSLPDSWLKNHQLTGIHLHFRKETHAGDSMKSLLFFRDSLTTHHLMHGDELRAEAV LEWKTAEIA
Specific function: Unknown
COG id: COG3884
COG function: function code I; Acyl-ACP thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.2.14
Molecular weight: Translated: 28558; Mature: 28558
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHASNKEIYSVQATVRTYESGANGLMKPETVLHWFQEIAEAHASCLGFGYDFVTSRSLA CCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEE WVEVRMDAAVSRLPRWKETVELRTWTAQETPLLARRNLEIRDAQGNCIVAASCLWAVIDI EEEEHHHHHHHHCCCHHHHHEEEEECCCCCCHHHHCCCEEEECCCCEEEHHHHHHHHHHH RRRRPVPLNRHISSFPDTPCKETVAPVSMDISGLLPMIREWTAERRDTDFNRHINNAAYL HHCCCCCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEEE VWALDSLPDSWLKNHQLTGIHLHFRKETHAGDSMKSLLFFRDSLTTHHLMHGDELRAEAV EEEHHHCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LEWKTAEIA EEEHHHCCC >Mature Secondary Structure MEHASNKEIYSVQATVRTYESGANGLMKPETVLHWFQEIAEAHASCLGFGYDFVTSRSLA CCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEE WVEVRMDAAVSRLPRWKETVELRTWTAQETPLLARRNLEIRDAQGNCIVAASCLWAVIDI EEEEHHHHHHHHCCCHHHHHEEEEECCCCCCHHHHCCCEEEECCCCEEEHHHHHHHHHHH RRRRPVPLNRHISSFPDTPCKETVAPVSMDISGLLPMIREWTAERRDTDFNRHINNAAYL HHCCCCCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEEE VWALDSLPDSWLKNHQLTGIHLHFRKETHAGDSMKSLLFFRDSLTTHHLMHGDELRAEAV EEEHHHCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LEWKTAEIA EEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: oleoyl-[acyl-carrier protein]; H2O
Specific reaction: oleoyl-[acyl-carrier protein] + H2O = [acyl-carrier protein] + oleate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA