Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736188
Identifier: 187736188
GI number: 187736188
Start: 2066951
End: 2067385
Strand: Reverse
Name: 187736188
Synonym: Amuc_1701
Alternate gene names: NA
Gene position: 2067385-2066951 (Counterclockwise)
Preceding gene: 187736189
Following gene: 187736187
Centisome position: 77.6
GC content: 54.25
Gene sequence:
>435_bases ATGAGCTCCATTTCCGAAGAAGCAAACAAGCTGGCGGATTTCATCCTGTTCACGCAACGTTCCTGCATTCTGAACCTTTC TTCAGAATTGAATGAGGGCAAGGTTTCCTACCCCCAGTTTTTCCTGCTGACTTATCTGGCCAGCGAAGATTTTCTGAGCA TGTCCAGCATTGCCCAGAAAATGGGGCATTCTACCGCGGCCGCTACCGGCATGGTGGATAAATTACAGGAAATGGGCTAC CTGAAACGCATGAGCGCAGCCAAAGACCGCCGCAAAATCATGGTCGCCATCACCCAGGAAGGGCGCGATCTGGTAGCTCG CATGCGCCAGAACATCGTTCGGGATCTGGCAGCCTTGATGGCCGGAGCGGATCCGGACGCACGCCAGACGCTTGCCGATA CCGGAAAATCCATCAGAAAGCGCCGTTTGGCCTGA
Upstream 100 bases:
>100_bases TTGACTTGCCCGCAGAAGGACGCGGCGGTAGGTTGGCCGAACCGCCGGCGAGTCTCCGGACGGGTATCGCTATCAACCCT CCCATACATTCACAACGATC
Downstream 100 bases:
>100_bases TTTCCGATTTTTCCTCCCGGTCTCTCCCGGAGAAACCGTTCCCTTGTTACGGGGAAGTCCTTTTTCTTTCCTTTCTTTTT TAAAAGGGCTTCCGGGGAGA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSSISEEANKLADFILFTQRSCILNLSSELNEGKVSYPQFFLLTYLASEDFLSMSSIAQKMGHSTAAATGMVDKLQEMGY LKRMSAAKDRRKIMVAITQEGRDLVARMRQNIVRDLAALMAGADPDARQTLADTGKSIRKRRLA
Sequences:
>Translated_144_residues MSSISEEANKLADFILFTQRSCILNLSSELNEGKVSYPQFFLLTYLASEDFLSMSSIAQKMGHSTAAATGMVDKLQEMGY LKRMSAAKDRRKIMVAITQEGRDLVARMRQNIVRDLAALMAGADPDARQTLADTGKSIRKRRLA >Mature_143_residues SSISEEANKLADFILFTQRSCILNLSSELNEGKVSYPQFFLLTYLASEDFLSMSSIAQKMGHSTAAATGMVDKLQEMGYL KRMSAAKDRRKIMVAITQEGRDLVARMRQNIVRDLAALMAGADPDARQTLADTGKSIRKRRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15997; Mature: 15866
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISEEANKLADFILFTQRSCILNLSSELNEGKVSYPQFFLLTYLASEDFLSMSSIAQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MGHSTAAATGMVDKLQEMGYLKRMSAAKDRRKIMVAITQEGRDLVARMRQNIVRDLAALM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHH AGADPDARQTLADTGKSIRKRRLA HCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSISEEANKLADFILFTQRSCILNLSSELNEGKVSYPQFFLLTYLASEDFLSMSSIAQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MGHSTAAATGMVDKLQEMGYLKRMSAAKDRRKIMVAITQEGRDLVARMRQNIVRDLAALM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHH AGADPDARQTLADTGKSIRKRRLA HCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA