Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736163
Identifier: 187736163
GI number: 187736163
Start: 2031102
End: 2033099
Strand: Direct
Name: 187736163
Synonym: Amuc_1676
Alternate gene names: NA
Gene position: 2031102-2033099 (Clockwise)
Preceding gene: 187736161
Following gene: 187736164
Centisome position: 76.24
GC content: 51.95
Gene sequence:
>1998_bases ATGAAACATCGAGGGAATGAGGCTTCGGGAGAGACGCAACTCGATGCCTCCCTTGTGGCTATTCTCCTCGCCGACCGTTC GAGCGGCGCTTTCATCCGCTGGGCCTGCAACGCCTACACTACCCACGGCGAGTCCTATGCGGCGGATCAAGAGATCTACC CCCATCAGGTGCATCTGATTCAGGAGCGCACCCGCAAGACGCAGGAAGAACAGCGCGACCGCACCAAAAAATCCGCCGAA GTCTTTACCCCTGCTTGGCTGTGCAACGCCATGATCAACGCCCGCGATGCCGTTTACTTCGGGCGGGAGGAGGTCTTTAA CCGCATGGAGGCTCCATCGTGGACGCCGACGCGCAAGACGATTGACTTTCCGACGACAGCATCTGGCCGCCGTCTCGCGT GGGAGCGTTACATCGATGCCCGCTGTCTGGAAATCACCTGCGGCGAAGCCCCCTTTCTCGTCTCGCGCTACGATGCCGTC GATGGTCGCCCCATCTCCTTGGCAGAGCGCATCGGCATCCTCGACCGCAAGCTGCGTATCATCGGCGAGCATACCTGCAC CGCAGAGGACTGGTTTCACTGGGCAAAACGCGCCCTCGAAAGCGCCTACGCTTACGAATACCAGGGCGACAGCCTCTTTC TCGCCCGTCTCAATCTTTTTCTGAGCATTAGCGAGTACCACCGTCACCTGTGGAAACGCCCCCTCAACCGACACCAACAA GAGGAAGTTGCCCGCATCCTCTCGTGGAATCTCTGGCAGATGGACGGCCTGACGGCGACGACTCCCTTTGCCACGGAACA GGGGAAGCCCGAGGATTCCTTATTTGATTTTTACGCCATCACAGCCGAAAGGCGCCCCCTCCGTAGCCTCATCCGCGACT GGCGCGGCAAAAAAACGATTCGATTCTCTGAACTCAACCTATCCACCACCATGAAATTTGATTTTGTCATCGGCAATCCG CCGTATCAGCTGGAAACCGCCAATAAATCCCTTTCCAACGGACAATTGCCAAGTAAAAGCATTTTTCATCATTTTCAGCT GAGCGCGGATCAGATTTCCTCCGGTCTTACCGTCTTGATTTATCCTGGAGGGCGATGGATTCAGCGTTCTGGAAAAGGAA TGGCGGATTTCGGCTTACAACAAATCAATGACAGCCGTTTACAAACCTTGTATTATTACCCCGACAGTACCGATCTCTTC CCTGCACAAGTTGCCGAAATTGCGGACGGCATCTCCATTGTGGTCAAAAATGCCCACAAGACGACCCCAAGCTTCCGCTA CTTCTATATGCGGCGCGGAGAAAAAACAGGTGTCGAGCTGGAGCCTCCCGGCGAAAATATCCTTCCTCTAGACCCACGCG ACGGAGCCGTTGTCAGGAAAATCGAGGATTTTGTTCAAAGAAACAAGTTGCCTTATTTGAACGATAATGTGCACTCAAGA AATCTATTTGGAATTGAGAGTAATTTTGTCGAAAAAAATCGAGATCAGGTTCGCCTCTATCAAGAAGGGGATGCGGTAGA TTGCGAGACGGAGATCAAGCTATATGCTAATGACCGAGCCGGGAAAGCTGGCAGAACGACATGGTTTGTTGCACCAAGAA GCATTATTCAGACGAATGAGGCTTACATCTCCAAATGGAAGGTTGTTGTTTCCAGTGCAAACGCCGGGGGACAAAAGAGA GATTGGCAGTTGGAAATCATCGACAATCAATCGGCATTCGGTCGTTCGAGGGTTGCTCTTTCTTCTTTTGAAACGAAGCA GGAAGCGGAGAATTTTTACCACTATGTGAAGAGCTATATTATTCGCTATGCCTTCCTGATGACGGATGAAGCTCTGACAA CTTTGGCGCTGAAAGTGCCGGATATGTCAGATTATACTTCTGACAACAAGTTAATCGACTGGTCGCAGGATATTGATAGT CAGTTGCAGAAGCTCATGTCCCTCAGTGATGCTGAGTTTGAATACATCAAAAACACGGTGCAGAGTGTACGAGCCTAA
Upstream 100 bases:
>100_bases TTCTTCCTTTTTTCTTGTTTCTTTGTCTGGCTCAATAATATAATATATTGAGAATCAAAACATTGAAGTTAAGAGCATTA TTTATACTCTACTTCCCTCG
Downstream 100 bases:
>100_bases AAGGAGAATCCATCCATGAACACCATCAACATCCGAAGCACGAAGAAGGTTGAGCCGAAGTGTTACGCCTACACGACTCC AGAGGTGCAGCGGCACGAGG
Product: Eco57I restriction endonuclease
Products: NA
Alternate protein names: Type II DNA Methyltransferase; Eco57I Restriction Endonuclease; Restriction Endonuclease; Site-Specific DNA-Methyltransferase; Type II DNA Methyltransferase Family Protein; Type II Restriction- System Restriction Subunit
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MKHRGNEASGETQLDASLVAILLADRSSGAFIRWACNAYTTHGESYAADQEIYPHQVHLIQERTRKTQEEQRDRTKKSAE VFTPAWLCNAMINARDAVYFGREEVFNRMEAPSWTPTRKTIDFPTTASGRRLAWERYIDARCLEITCGEAPFLVSRYDAV DGRPISLAERIGILDRKLRIIGEHTCTAEDWFHWAKRALESAYAYEYQGDSLFLARLNLFLSISEYHRHLWKRPLNRHQQ EEVARILSWNLWQMDGLTATTPFATEQGKPEDSLFDFYAITAERRPLRSLIRDWRGKKTIRFSELNLSTTMKFDFVIGNP PYQLETANKSLSNGQLPSKSIFHHFQLSADQISSGLTVLIYPGGRWIQRSGKGMADFGLQQINDSRLQTLYYYPDSTDLF PAQVAEIADGISIVVKNAHKTTPSFRYFYMRRGEKTGVELEPPGENILPLDPRDGAVVRKIEDFVQRNKLPYLNDNVHSR NLFGIESNFVEKNRDQVRLYQEGDAVDCETEIKLYANDRAGKAGRTTWFVAPRSIIQTNEAYISKWKVVVSSANAGGQKR DWQLEIIDNQSAFGRSRVALSSFETKQEAENFYHYVKSYIIRYAFLMTDEALTTLALKVPDMSDYTSDNKLIDWSQDIDS QLQKLMSLSDAEFEYIKNTVQSVRA
Sequences:
>Translated_665_residues MKHRGNEASGETQLDASLVAILLADRSSGAFIRWACNAYTTHGESYAADQEIYPHQVHLIQERTRKTQEEQRDRTKKSAE VFTPAWLCNAMINARDAVYFGREEVFNRMEAPSWTPTRKTIDFPTTASGRRLAWERYIDARCLEITCGEAPFLVSRYDAV DGRPISLAERIGILDRKLRIIGEHTCTAEDWFHWAKRALESAYAYEYQGDSLFLARLNLFLSISEYHRHLWKRPLNRHQQ EEVARILSWNLWQMDGLTATTPFATEQGKPEDSLFDFYAITAERRPLRSLIRDWRGKKTIRFSELNLSTTMKFDFVIGNP PYQLETANKSLSNGQLPSKSIFHHFQLSADQISSGLTVLIYPGGRWIQRSGKGMADFGLQQINDSRLQTLYYYPDSTDLF PAQVAEIADGISIVVKNAHKTTPSFRYFYMRRGEKTGVELEPPGENILPLDPRDGAVVRKIEDFVQRNKLPYLNDNVHSR NLFGIESNFVEKNRDQVRLYQEGDAVDCETEIKLYANDRAGKAGRTTWFVAPRSIIQTNEAYISKWKVVVSSANAGGQKR DWQLEIIDNQSAFGRSRVALSSFETKQEAENFYHYVKSYIIRYAFLMTDEALTTLALKVPDMSDYTSDNKLIDWSQDIDS QLQKLMSLSDAEFEYIKNTVQSVRA >Mature_665_residues MKHRGNEASGETQLDASLVAILLADRSSGAFIRWACNAYTTHGESYAADQEIYPHQVHLIQERTRKTQEEQRDRTKKSAE VFTPAWLCNAMINARDAVYFGREEVFNRMEAPSWTPTRKTIDFPTTASGRRLAWERYIDARCLEITCGEAPFLVSRYDAV DGRPISLAERIGILDRKLRIIGEHTCTAEDWFHWAKRALESAYAYEYQGDSLFLARLNLFLSISEYHRHLWKRPLNRHQQ EEVARILSWNLWQMDGLTATTPFATEQGKPEDSLFDFYAITAERRPLRSLIRDWRGKKTIRFSELNLSTTMKFDFVIGNP PYQLETANKSLSNGQLPSKSIFHHFQLSADQISSGLTVLIYPGGRWIQRSGKGMADFGLQQINDSRLQTLYYYPDSTDLF PAQVAEIADGISIVVKNAHKTTPSFRYFYMRRGEKTGVELEPPGENILPLDPRDGAVVRKIEDFVQRNKLPYLNDNVHSR NLFGIESNFVEKNRDQVRLYQEGDAVDCETEIKLYANDRAGKAGRTTWFVAPRSIIQTNEAYISKWKVVVSSANAGGQKR DWQLEIIDNQSAFGRSRVALSSFETKQEAENFYHYVKSYIIRYAFLMTDEALTTLALKVPDMSDYTSDNKLIDWSQDIDS QLQKLMSLSDAEFEYIKNTVQSVRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76433; Mature: 76433
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRGNEASGETQLDASLVAILLADRSSGAFIRWACNAYTTHGESYAADQEIYPHQVHLI CCCCCCCCCCCCHHHHHEEEEEEECCCCCCEEEEEECCEEECCCCCCCCCCCCCHHHHHH QERTRKTQEEQRDRTKKSAEVFTPAWLCNAMINARDAVYFGREEVFNRMEAPSWTPTRKT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEECHHHHHHHHCCCCCCCCCCE IDFPTTASGRRLAWERYIDARCLEITCGEAPFLVSRYDAVDGRPISLAERIGILDRKLRI ECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHCHHHHHHHH IGEHTCTAEDWFHWAKRALESAYAYEYQGDSLFLARLNLFLSISEYHRHLWKRPLNRHQQ HCCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EEVARILSWNLWQMDGLTATTPFATEQGKPEDSLFDFYAITAERRPLRSLIRDWRGKKTI HHHHHHHHCCCEEECCCEECCCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHCCCCEE RFSELNLSTTMKFDFVIGNPPYQLETANKSLSNGQLPSKSIFHHFQLSADQISSGLTVLI EEEECCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCEEEE YPGGRWIQRSGKGMADFGLQQINDSRLQTLYYYPDSTDLFPAQVAEIADGISIVVKNAHK ECCCCEEHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCC TTPSFRYFYMRRGEKTGVELEPPGENILPLDPRDGAVVRKIEDFVQRNKLPYLNDNVHSR CCCCEEEEEEECCCCCCCEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC NLFGIESNFVEKNRDQVRLYQEGDAVDCETEIKLYANDRAGKAGRTTWFVAPRSIIQTNE EEECCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHCCH AYISKWKVVVSSANAGGQKRDWQLEIIDNQSAFGRSRVALSSFETKQEAENFYHYVKSYI HHHHEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRYAFLMTDEALTTLALKVPDMSDYTSDNKLIDWSQDIDSQLQKLMSLSDAEFEYIKNTV HHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHH QSVRA HHHCC >Mature Secondary Structure MKHRGNEASGETQLDASLVAILLADRSSGAFIRWACNAYTTHGESYAADQEIYPHQVHLI CCCCCCCCCCCCHHHHHEEEEEEECCCCCCEEEEEECCEEECCCCCCCCCCCCCHHHHHH QERTRKTQEEQRDRTKKSAEVFTPAWLCNAMINARDAVYFGREEVFNRMEAPSWTPTRKT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEECHHHHHHHHCCCCCCCCCCE IDFPTTASGRRLAWERYIDARCLEITCGEAPFLVSRYDAVDGRPISLAERIGILDRKLRI ECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHCHHHHHHHH IGEHTCTAEDWFHWAKRALESAYAYEYQGDSLFLARLNLFLSISEYHRHLWKRPLNRHQQ HCCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EEVARILSWNLWQMDGLTATTPFATEQGKPEDSLFDFYAITAERRPLRSLIRDWRGKKTI HHHHHHHHCCCEEECCCEECCCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHCCCCEE RFSELNLSTTMKFDFVIGNPPYQLETANKSLSNGQLPSKSIFHHFQLSADQISSGLTVLI EEEECCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCEEEE YPGGRWIQRSGKGMADFGLQQINDSRLQTLYYYPDSTDLFPAQVAEIADGISIVVKNAHK ECCCCEEHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCC TTPSFRYFYMRRGEKTGVELEPPGENILPLDPRDGAVVRKIEDFVQRNKLPYLNDNVHSR CCCCEEEEEEECCCCCCCEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC NLFGIESNFVEKNRDQVRLYQEGDAVDCETEIKLYANDRAGKAGRTTWFVAPRSIIQTNE EEECCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHCCH AYISKWKVVVSSANAGGQKRDWQLEIIDNQSAFGRSRVALSSFETKQEAENFYHYVKSYI HHHHEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRYAFLMTDEALTTLALKVPDMSDYTSDNKLIDWSQDIDSQLQKLMSLSDAEFEYIKNTV HHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHH QSVRA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA