Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736092
Identifier: 187736092
GI number: 187736092
Start: 1926953
End: 1927837
Strand: Reverse
Name: 187736092
Synonym: Amuc_1603
Alternate gene names: NA
Gene position: 1927837-1926953 (Counterclockwise)
Preceding gene: 187736093
Following gene: 187736091
Centisome position: 72.36
GC content: 52.32
Gene sequence:
>885_bases ATGCGTCTTTTATCCTCCGCCGCCGTCATTTGCGCCGCCCTGTTCTCCGGAACCATCCTTCATGCGCAGGACCCGGAACT GCTGGCCAAGCGCCAGTGCCGTTCCGTCCATATCAACCAGCAGGGGCATCCCTCCCAGGCAAGCGCCCTGTACAATGTAG TGAAAGCCAAAACATCCGTTCCCGGCACCTACTTTTGCGCCATGAATTTTGACGACGGCTATATCGGTTTTCAGGAACAA TCCAACGGTAAAAAAGTAATCATCTTTTCCATCTGGGATCCGGTGGCACACGGAGACAACCCCAATGATGTGCCGGAAGA AGAACGCACCAAGCTGGTAAAACTGGGCAAAGATGCGCGCTCCGGACGTTTTGGCGGTGAAGGAACAGGCGGACAAAGCT TCGTGGACTATCCCTGGGCAATCGGGGAGAACATGCGCTTCCTCGTCTGCGTCAAAAAAATGGGGAAATTCAAGGAAATC AGCGGTTATTACTTTAATAATAAAAGCAGGTCCTGGGATCTTATTTCCAAATGGAAAACGCATTCCTCGGAAAAGGAACT TTCCTTCTCCGTCGGATTCGTGGAAGATTTCATGCGTAATTTTGAATCAGCCAAGAAGGCCCGCGGAGCCTTCTTTGGCC CCAGCTTCGCGTACAAGGACGGCAAATGGCATCCCAATACCAGCGTAACGTTCACCGGCGACCCAACCCCCTCCACCAAC GTCATGGCGAACATCCAGCCTGATGGTTCCGTGCTGCTTCAGACGGGGGGAACTACGAAAATGACGGATTTCAAGCTGTT CCAAAATCGTCCCCTGCCCCAGAATATCAAGCTGGTCCTGCCTGACAAGGCCGTTACCAGTCTTGTTCAGGAGAACATTA ACTGA
Upstream 100 bases:
>100_bases GAGATTTCCCCCAGGCCAAACGTAATTAGCCTGTCCTAATTATTTGCCTGTCCCCCACCCTCCGGGCATCAAATCAGACA ACCATCAATCATTCAAAACC
Downstream 100 bases:
>100_bases TTATGTCCCCCACCGGCTGGCTAACCATGATTGTTTCCATCGGCGGCGTACTGGCCGCCGCCGCTTGGGCGTATTACAAA GTACTCTCCACCCCCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRLLSSAAVICAALFSGTILHAQDPELLAKRQCRSVHINQQGHPSQASALYNVVKAKTSVPGTYFCAMNFDDGYIGFQEQ SNGKKVIIFSIWDPVAHGDNPNDVPEEERTKLVKLGKDARSGRFGGEGTGGQSFVDYPWAIGENMRFLVCVKKMGKFKEI SGYYFNNKSRSWDLISKWKTHSSEKELSFSVGFVEDFMRNFESAKKARGAFFGPSFAYKDGKWHPNTSVTFTGDPTPSTN VMANIQPDGSVLLQTGGTTKMTDFKLFQNRPLPQNIKLVLPDKAVTSLVQENIN
Sequences:
>Translated_294_residues MRLLSSAAVICAALFSGTILHAQDPELLAKRQCRSVHINQQGHPSQASALYNVVKAKTSVPGTYFCAMNFDDGYIGFQEQ SNGKKVIIFSIWDPVAHGDNPNDVPEEERTKLVKLGKDARSGRFGGEGTGGQSFVDYPWAIGENMRFLVCVKKMGKFKEI SGYYFNNKSRSWDLISKWKTHSSEKELSFSVGFVEDFMRNFESAKKARGAFFGPSFAYKDGKWHPNTSVTFTGDPTPSTN VMANIQPDGSVLLQTGGTTKMTDFKLFQNRPLPQNIKLVLPDKAVTSLVQENIN >Mature_294_residues MRLLSSAAVICAALFSGTILHAQDPELLAKRQCRSVHINQQGHPSQASALYNVVKAKTSVPGTYFCAMNFDDGYIGFQEQ SNGKKVIIFSIWDPVAHGDNPNDVPEEERTKLVKLGKDARSGRFGGEGTGGQSFVDYPWAIGENMRFLVCVKKMGKFKEI SGYYFNNKSRSWDLISKWKTHSSEKELSFSVGFVEDFMRNFESAKKARGAFFGPSFAYKDGKWHPNTSVTFTGDPTPSTN VMANIQPDGSVLLQTGGTTKMTDFKLFQNRPLPQNIKLVLPDKAVTSLVQENIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32625; Mature: 32625
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLSSAAVICAALFSGTILHAQDPELLAKRQCRSVHINQQGHPSQASALYNVVKAKTSV CCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCC PGTYFCAMNFDDGYIGFQEQSNGKKVIIFSIWDPVAHGDNPNDVPEEERTKLVKLGKDAR CCEEEEEEECCCCEECCEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCC SGRFGGEGTGGQSFVDYPWAIGENMRFLVCVKKMGKFKEISGYYFNNKSRSWDLISKWKT CCCCCCCCCCCCCEECCCEECCCCCEEEEEEHHHCCHHHCCCEEECCCCCCCHHHHHHHC HSSEKELSFSVGFVEDFMRNFESAKKARGAFFGPSFAYKDGKWHPNTSVTFTGDPTPSTN CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCC VMANIQPDGSVLLQTGGTTKMTDFKLFQNRPLPQNIKLVLPDKAVTSLVQENIN EEEEECCCCCEEEEECCCCEEEEEHHHHCCCCCCCCEEEECCHHHHHHHHHCCC >Mature Secondary Structure MRLLSSAAVICAALFSGTILHAQDPELLAKRQCRSVHINQQGHPSQASALYNVVKAKTSV CCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCC PGTYFCAMNFDDGYIGFQEQSNGKKVIIFSIWDPVAHGDNPNDVPEEERTKLVKLGKDAR CCEEEEEEECCCCEECCEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCC SGRFGGEGTGGQSFVDYPWAIGENMRFLVCVKKMGKFKEISGYYFNNKSRSWDLISKWKT CCCCCCCCCCCCCEECCCEECCCCCEEEEEEHHHCCHHHCCCEEECCCCCCCHHHHHHHC HSSEKELSFSVGFVEDFMRNFESAKKARGAFFGPSFAYKDGKWHPNTSVTFTGDPTPSTN CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCC VMANIQPDGSVLLQTGGTTKMTDFKLFQNRPLPQNIKLVLPDKAVTSLVQENIN EEEEECCCCCEEEEECCCCEEEEEHHHHCCCCCCCCEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA