Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736091
Identifier: 187736091
GI number: 187736091
Start: 1926798
End: 1926950
Strand: Reverse
Name: 187736091
Synonym: Amuc_1602
Alternate gene names: NA
Gene position: 1926950-1926798 (Counterclockwise)
Preceding gene: 187736092
Following gene: 187736088
Centisome position: 72.33
GC content: 59.48
Gene sequence:
>153_bases ATGTCCCCCACCGGCTGGCTAACCATGATTGTTTCCATCGGCGGCGTACTGGCCGCCGCCGCTTGGGCGTATTACAAAGT ACTCTCCACCCCCAAGGAAACGGAATATCTGGGCAGCCCCACCCCGCCACTGCCGGAAAATGCGGAGGAATAA
Upstream 100 bases:
>100_bases ATTTCAAGCTGTTCCAAAATCGTCCCCTGCCCCAGAATATCAAGCTGGTCCTGCCTGACAAGGCCGTTACCAGTCTTGTT CAGGAGAACATTAACTGATT
Downstream 100 bases:
>100_bases GGCCCCGACCCGGTGAACCGCTGCACTCCGGACTGAACAACTCCCCCAAAATCATCTTGCCGCAGCCAGAGAGAGCGCAT GTCGTCCCGATACCTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MSPTGWLTMIVSIGGVLAAAAWAYYKVLSTPKETEYLGSPTPPLPENAEE
Sequences:
>Translated_50_residues MSPTGWLTMIVSIGGVLAAAAWAYYKVLSTPKETEYLGSPTPPLPENAEE >Mature_49_residues SPTGWLTMIVSIGGVLAAAAWAYYKVLSTPKETEYLGSPTPPLPENAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5339; Mature: 5208
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTGWLTMIVSIGGVLAAAAWAYYKVLSTPKETEYLGSPTPPLPENAEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPTGWLTMIVSIGGVLAAAAWAYYKVLSTPKETEYLGSPTPPLPENAEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA