Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736043
Identifier: 187736043
GI number: 187736043
Start: 1866138
End: 1866416
Strand: Direct
Name: 187736043
Synonym: Amuc_1553
Alternate gene names: NA
Gene position: 1866138-1866416 (Clockwise)
Preceding gene: 187736042
Following gene: 187736045
Centisome position: 70.05
GC content: 50.9
Gene sequence:
>279_bases ATGGGCGGATGTCTGGTTCCCCAAAGGCACATTTACTCCGGATTAGAAGGGGGGGGCATTGAATACGTCCTGGTTTGTCT GCCGGTAAAGGATGGAAAATCCTTGGTAGCTGATTCTGTGAAGGAGGTTCTGGAGAAAGGAAAGTTTTATCCCAAGCCGG TGTTGGCCGCCGGTGATGGTTACGGGGCGCAGTGTTTCGCGTATGAGGAGGGCGATACTGATGCCAAACAACGAGGCGTG AAATTAAGAAAATTCTCGAGCCAGTTAAAGCAGTCCTGA
Upstream 100 bases:
>100_bases TTTACCTTTGACGCGCTTGTGGGAAGCACCTGTGGTGAGAAACCCATAGGAAAGTTAGCTGACCTGTTGGGTGTCTGCTT TCTGGCGGCATTTTCCATTC
Downstream 100 bases:
>100_bases ACCGGAGGATGGAATATCCCAAATATTTTCCCGGGCAGGCTTATCCCATGATTTGTGCCGGAAAAGGAAATAGTTTCACG AACAGAAAGTCCAGCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MGGCLVPQRHIYSGLEGGGIEYVLVCLPVKDGKSLVADSVKEVLEKGKFYPKPVLAAGDGYGAQCFAYEEGDTDAKQRGV KLRKFSSQLKQS
Sequences:
>Translated_92_residues MGGCLVPQRHIYSGLEGGGIEYVLVCLPVKDGKSLVADSVKEVLEKGKFYPKPVLAAGDGYGAQCFAYEEGDTDAKQRGV KLRKFSSQLKQS >Mature_91_residues GGCLVPQRHIYSGLEGGGIEYVLVCLPVKDGKSLVADSVKEVLEKGKFYPKPVLAAGDGYGAQCFAYEEGDTDAKQRGVK LRKFSSQLKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9912; Mature: 9780
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGCLVPQRHIYSGLEGGGIEYVLVCLPVKDGKSLVADSVKEVLEKGKFYPKPVLAAGDG CCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCC YGAQCFAYEEGDTDAKQRGVKLRKFSSQLKQS CCCEEEEECCCCCCHHHHCCHHHHHHHHHCCC >Mature Secondary Structure GGCLVPQRHIYSGLEGGGIEYVLVCLPVKDGKSLVADSVKEVLEKGKFYPKPVLAAGDG CCCCCCHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCC YGAQCFAYEEGDTDAKQRGVKLRKFSSQLKQS CCCEEEEECCCCCCHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA